RNA–Protein interactions for RNA: ENST00000568454.5

TSC2-222, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TSC2, Length 5,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-222ENST00000568454 DUX4L4P0CJ87 422 aa17.5■□□□□ 0.39
TSC2-222ENST00000568454 DUX4L5P0CJ88 424 aa17.5■□□□□ 0.39
TSC2-222ENST00000568454 DUX4L6P0CJ89 424 aa17.5■□□□□ 0.39
TSC2-222ENST00000568454 DUX4L7P0CJ90 424 aa17.5■□□□□ 0.39
TSC2-222ENST00000568454 KCNA2P16389 499 aa17.5■□□□□ 0.39
TSC2-222ENST00000568454 LTKP29376 864 aa17.5■□□□□ 0.39
TSC2-222ENST00000568454 ATP6V1E1P36543 226 aa17.5■□□□□ 0.39
TSC2-222ENST00000568454 NLRP11P59045 1033 aaKnown RBP17.5■□□□□ 0.39
TSC2-222ENST00000568454 LBRQ14739 615 aaKnown RBP17.5■□□□□ 0.39
TSC2-222ENST00000568454 STX19Q8N4C7 294 aa17.5■□□□□ 0.39
TSC2-222ENST00000568454 AP5M1Q9H0R1 490 aa17.5■□□□□ 0.39
TSC2-222ENST00000568454 GEMIN8Q9NWZ8 242 aaKnown RBP17.5■□□□□ 0.39
TSC2-222ENST00000568454 DUX4Q9UBX2 424 aa17.5■□□□□ 0.39
TSC2-222ENST00000568454 TBC1D4O60343 1298 aa17.49■□□□□ 0.39
TSC2-222ENST00000568454 ENO3P13929 434 aaPredicted RBP17.49■□□□□ 0.39
TSC2-222ENST00000568454 PLA2G4AP47712 749 aa17.49■□□□□ 0.39
TSC2-222ENST00000568454 CTCFP49711 727 aaPredicted RBP17.49■□□□□ 0.39
TSC2-222ENST00000568454 ITIH4Q14624 930 aa17.49■□□□□ 0.39
TSC2-222ENST00000568454 LRRC31Q6UY01 552 aa17.49■□□□□ 0.39
TSC2-222ENST00000568454 CD248Q9HCU0 757 aa17.49■□□□□ 0.39
TSC2-222ENST00000568454 NEU2Q9Y3R4 380 aa17.49■□□□□ 0.39
TSC2-222ENST00000568454 RHOBTB3O94955 611 aa17.49■□□□□ 0.39
TSC2-222ENST00000568454 SFNP31947 248 aa17.49■□□□□ 0.39
TSC2-222ENST00000568454 SKOR1P84550 965 aa17.49■□□□□ 0.39
TSC2-222ENST00000568454 SLC27A3Q5K4L6 730 aa17.49■□□□□ 0.39
TSC2-222ENST00000568454 NEUROG2Q9H2A3 272 aa17.49■□□□□ 0.39
TSC2-222ENST00000568454 SLC8A2Q9UPR5 921 aa17.49■□□□□ 0.39
TSC2-222ENST00000568454 MYO1DO94832 1006 aa17.49■□□□□ 0.39
TSC2-222ENST00000568454 SERPINB1P30740 379 aa17.49■□□□□ 0.39
TSC2-222ENST00000568454 HSPA2P54652 639 aa17.49■□□□□ 0.39
TSC2-222ENST00000568454 EXOSC10Q01780 885 aaKnown RBP17.49■□□□□ 0.39
TSC2-222ENST00000568454 PDIA5Q14554 519 aa17.49■□□□□ 0.39
TSC2-222ENST00000568454 ERP44Q9BS26 406 aa17.49■□□□□ 0.39
TSC2-222ENST00000568454 TOPORSQ9NS56 1045 aaPredicted RBP17.49■□□□□ 0.39
TSC2-222ENST00000568454 IL1RAPL1Q9NZN1 696 aa17.49■□□□□ 0.39
TSC2-222ENST00000568454 COPG1Q9Y678 874 aaKnown RBP17.49■□□□□ 0.39
TSC2-222ENST00000568454 PREX2Q70Z35 1606 aa17.49■□□□□ 0.39
TSC2-222ENST00000568454 REREQ9P2R6 1566 aa17.49■□□□□ 0.39
TSC2-222ENST00000568454 WDR93Q6P2C0 686 aa17.49■□□□□ 0.39
TSC2-222ENST00000568454 COL23A1Q86Y22 540 aaPredicted RBP17.49■□□□□ 0.39
TSC2-222ENST00000568454 AGR3Q8TD06 166 aa17.49■□□□□ 0.39
TSC2-222ENST00000568454 C9orf72Q96LT7 481 aa17.49■□□□□ 0.39
TSC2-222ENST00000568454 TRIM10Q9UDY6 481 aa17.49■□□□□ 0.39
TSC2-222ENST00000568454 PJA2O43164 708 aa17.48■□□□□ 0.39
TSC2-222ENST00000568454 ERFP50548 548 aa17.48■□□□□ 0.39
TSC2-222ENST00000568454 FUT8Q9BYC5 575 aa17.48■□□□□ 0.39
TSC2-222ENST00000568454 SRP72O76094 671 aaKnown RBP17.48■□□□□ 0.39
TSC2-222ENST00000568454 H2AFXP16104 143 aaPredicted RBP17.48■□□□□ 0.39
TSC2-222ENST00000568454 ZNF200P98182 395 aaPredicted RBP17.48■□□□□ 0.39
TSC2-222ENST00000568454 FAM102AQ5T9C2 384 aaPredicted RBP17.48■□□□□ 0.39
TSC2-222ENST00000568454 PCYOX1LQ8NBM8 494 aa17.48■□□□□ 0.39
TSC2-222ENST00000568454 TMA16Q96EY4 203 aaKnown RBP17.48■□□□□ 0.39
TSC2-222ENST00000568454 BEGAINQ9BUH8 593 aa17.48■□□□□ 0.39
TSC2-222ENST00000568454 USP17L15C9J2P7 530 aa17.48■□□□□ 0.39
TSC2-222ENST00000568454 USP17L13C9JLJ4 530 aa17.48■□□□□ 0.39
TSC2-222ENST00000568454 USP17L11C9JVI0 530 aa17.48■□□□□ 0.39
TSC2-222ENST00000568454 USP17L18D6R9N7 530 aa17.48■□□□□ 0.39
TSC2-222ENST00000568454 USP17L22D6RA61 530 aa17.48■□□□□ 0.39
TSC2-222ENST00000568454 USP17L17D6RBQ6 530 aa17.48■□□□□ 0.39
TSC2-222ENST00000568454 USP17L19D6RCP7 530 aa17.48■□□□□ 0.39
TSC2-222ENST00000568454 USP17L20D6RJB6 530 aa17.48■□□□□ 0.39
TSC2-222ENST00000568454 E5RI56 91 aa17.48■□□□□ 0.39
TSC2-222ENST00000568454 QARSP47897 775 aaKnown RBP17.48■□□□□ 0.39
TSC2-222ENST00000568454 USP17L24Q0WX57 530 aa17.48■□□□□ 0.39
TSC2-222ENST00000568454 USP17L6PQ6QN14 398 aa17.48■□□□□ 0.39
TSC2-222ENST00000568454 GPD1LQ8N335 351 aa17.48■□□□□ 0.39
TSC2-222ENST00000568454 C7orf25Q9BPX7 421 aa17.48■□□□□ 0.39
TSC2-222ENST00000568454 UNC45AQ9H3U1 944 aa17.48■□□□□ 0.39
TSC2-222ENST00000568454 AGPAT5Q9NUQ2 364 aa17.48■□□□□ 0.39
TSC2-222ENST00000568454 TMEM260Q9NX78 707 aa17.48■□□□□ 0.39
TSC2-222ENST00000568454 CDV3Q9UKY7 258 aaKnown RBP17.48■□□□□ 0.39
TSC2-222ENST00000568454 EFCAB6Q5THR3 1501 aa17.48■□□□□ 0.39
TSC2-222ENST00000568454 NCAPD2Q15021 1401 aa17.48■□□□□ 0.39
TSC2-222ENST00000568454 CYP2D6P10635 497 aa17.48■□□□□ 0.39
TSC2-222ENST00000568454 USP11P51784 963 aa17.48■□□□□ 0.39
TSC2-222ENST00000568454 ZNF568Q3ZCX4 644 aa17.48■□□□□ 0.39
TSC2-222ENST00000568454 EPHA10Q5JZY3 1008 aa17.48■□□□□ 0.39
TSC2-222ENST00000568454 RC3H1Q5TC82 1133 aaKnown RBP17.48■□□□□ 0.39
TSC2-222ENST00000568454 C1orf228Q6PIY5 440 aa17.48■□□□□ 0.39
TSC2-222ENST00000568454 NLGN1Q8N2Q7 840 aa17.48■□□□□ 0.39
TSC2-222ENST00000568454 DHX35Q9H5Z1 703 aaKnown RBP17.48■□□□□ 0.39
TSC2-222ENST00000568454 M0R3G1 203 aa17.47■□□□□ 0.39
TSC2-222ENST00000568454 TAGAPQ8N103 731 aa17.47■□□□□ 0.39
TSC2-222ENST00000568454 DDI1Q8WTU0 396 aa17.47■□□□□ 0.39
TSC2-222ENST00000568454 PRPF18Q99633 342 aaKnown RBP17.47■□□□□ 0.39
TSC2-222ENST00000568454 APEX2Q9UBZ4 518 aa17.47■□□□□ 0.39
TSC2-222ENST00000568454 ADRM1Q16186 407 aa17.47■□□□□ 0.39
TSC2-222ENST00000568454 MYCBPAPQ8TBZ2 947 aa17.47■□□□□ 0.39
TSC2-222ENST00000568454 OSBPL8Q9BZF1 889 aa17.47■□□□□ 0.39
TSC2-222ENST00000568454 ZC3H7BQ9UGR2 993 aaKnown RBP17.47■□□□□ 0.39
TSC2-222ENST00000568454 GYPCP04921 128 aa17.47■□□□□ 0.39
TSC2-222ENST00000568454 NQO1P15559 274 aaKnown RBP17.47■□□□□ 0.39
TSC2-222ENST00000568454 VCPKMTQ9H867 229 aa17.47■□□□□ 0.39
TSC2-222ENST00000568454 SHROOM2Q13796 1616 aa17.47■□□□□ 0.39
TSC2-222ENST00000568454 DSG1Q02413 1049 aa17.47■□□□□ 0.39
TSC2-222ENST00000568454 WLSQ5T9L3 541 aa17.47■□□□□ 0.39
TSC2-222ENST00000568454 CYFIP1Q7L576 1253 aa17.47■□□□□ 0.39
TSC2-222ENST00000568454 SULF1Q8IWU6 871 aa17.47■□□□□ 0.39
TSC2-222ENST00000568454 CLEC4FQ8N1N0 589 aa17.47■□□□□ 0.39
TSC2-222ENST00000568454 ZNF710Q8N1W2 664 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms