RNA–Protein interactions for RNA: ENST00000568382.5

SCAPER-219, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 4

Gene SCAPER, Length 544 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-219	ENST00000568382	ZNF720	Q7Z2F6	126 aa		13.46	□□□□□ -0.25
SCAPER-219	ENST00000568382	SFR1	Q86XK3	245 aa		13.46	□□□□□ -0.25
SCAPER-219	ENST00000568382	EFHB	Q8N7U6	833 aa		13.46	□□□□□ -0.25
SCAPER-219	ENST00000568382	MRPL43	Q8N983	215 aa	Known RBP	13.46	□□□□□ -0.25
SCAPER-219	ENST00000568382	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	13.46	□□□□□ -0.25
SCAPER-219	ENST00000568382	RABGGTA	Q92696	567 aa		13.46	□□□□□ -0.25
SCAPER-219	ENST00000568382	PPP2R3C	Q969Q6	453 aa		13.46	□□□□□ -0.25
SCAPER-219	ENST00000568382	CCDC47	Q96A33	483 aa	Known RBP	13.46	□□□□□ -0.25
SCAPER-219	ENST00000568382	DHX58	Q96C10	678 aa		13.46	□□□□□ -0.25
SCAPER-219	ENST00000568382	COLEC11	Q9BWP8	271 aa		13.46	□□□□□ -0.25
SCAPER-219	ENST00000568382	COL25A1	Q9BXS0	654 aa	Predicted RBP	13.46	□□□□□ -0.25
SCAPER-219	ENST00000568382	ZBP1	Q9H171	429 aa		13.46	□□□□□ -0.25
SCAPER-219	ENST00000568382	KBTBD4	Q9NVX7	518 aa		13.46	□□□□□ -0.25
SCAPER-219	ENST00000568382	ANKFY1	Q9P2R3	1169 aa		13.46	□□□□□ -0.25
SCAPER-219	ENST00000568382	PRG3	Q9Y2Y8	225 aa	Predicted RBP	13.46	□□□□□ -0.25
SCAPER-219	ENST00000568382		A0A1B0GVL5	298 aa		13.45	□□□□□ -0.26
SCAPER-219	ENST00000568382	C2orf71	A6NGG8	1288 aa		13.45	□□□□□ -0.26
SCAPER-219	ENST00000568382		H3BQ06	376 aa	Predicted RBP	13.45	□□□□□ -0.26
SCAPER-219	ENST00000568382	CLDN3	O15551	220 aa		13.45	□□□□□ -0.26
SCAPER-219	ENST00000568382	MEFV	O15553	781 aa	Predicted RBP	13.45	□□□□□ -0.26
SCAPER-219	ENST00000568382	NR1I2	O75469	434 aa		13.45	□□□□□ -0.26
SCAPER-219	ENST00000568382	GLP2R	O95838	553 aa		13.45	□□□□□ -0.26
SCAPER-219	ENST00000568382	EFEMP2	O95967	443 aa		13.45	□□□□□ -0.26
SCAPER-219	ENST00000568382	CTSA	P10619	480 aa		13.45	□□□□□ -0.26
SCAPER-219	ENST00000568382	HARS	P12081	509 aa	Known RBP	13.45	□□□□□ -0.26
SCAPER-219	ENST00000568382	PFKFB1	P16118	471 aa		13.45	□□□□□ -0.26
SCAPER-219	ENST00000568382	RBM10	P98175	930 aa	Known RBP	13.45	□□□□□ -0.26
SCAPER-219	ENST00000568382	MCL1	Q07820	350 aa		13.45	□□□□□ -0.26
SCAPER-219	ENST00000568382	TUSC3	Q13454	348 aa		13.45	□□□□□ -0.26
SCAPER-219	ENST00000568382	SMC1A	Q14683	1233 aa	Known RBP	13.45	□□□□□ -0.26
SCAPER-219	ENST00000568382	SEZ6	Q53EL9	994 aa		13.45	□□□□□ -0.26
SCAPER-219	ENST00000568382	XKR4	Q5GH76	650 aa		13.45	□□□□□ -0.26
SCAPER-219	ENST00000568382	TAS1R1	Q7RTX1	841 aa		13.45	□□□□□ -0.26
SCAPER-219	ENST00000568382	AUTS2	Q8WXX7	1259 aa		13.45	□□□□□ -0.26
SCAPER-219	ENST00000568382	SYAP1	Q96A49	352 aa	Predicted RBP	13.45	□□□□□ -0.26
SCAPER-219	ENST00000568382	BICD1	Q96G01	975 aa		13.45	□□□□□ -0.26
SCAPER-219	ENST00000568382	TIGD1	Q96MW7	591 aa		13.45	□□□□□ -0.26
SCAPER-219	ENST00000568382	ACAP3	Q96P50	834 aa		13.45	□□□□□ -0.26
SCAPER-219	ENST00000568382	PAAF1	Q9BRP4	392 aa		13.45	□□□□□ -0.26
SCAPER-219	ENST00000568382	CCDC94	Q9BW85	323 aa	Predicted RBP	13.45	□□□□□ -0.26
SCAPER-219	ENST00000568382	GTPBP4	Q9BZE4	634 aa	Known RBP	13.45	□□□□□ -0.26
SCAPER-219	ENST00000568382	TNMD	Q9H2S6	317 aa		13.45	□□□□□ -0.26
SCAPER-219	ENST00000568382	ST6GALNAC4	Q9H4F1	302 aa		13.45	□□□□□ -0.26
SCAPER-219	ENST00000568382	TBC1D7	Q9P0N9	293 aa		13.45	□□□□□ -0.26
SCAPER-219	ENST00000568382	CIT	O14578	2027 aa		13.45	□□□□□ -0.26
SCAPER-219	ENST00000568382	BRWD1	Q9NSI6	2320 aa		13.45	□□□□□ -0.26
SCAPER-219	ENST00000568382	FAM237A	A0A1B0GTK4	181 aa		13.44	□□□□□ -0.26
SCAPER-219	ENST00000568382	SMIM28	A0A1B0GU29	152 aa		13.44	□□□□□ -0.26
SCAPER-219	ENST00000568382	FRMD3	A2A2Y4	597 aa		13.44	□□□□□ -0.26
SCAPER-219	ENST00000568382	ANKRD63	C9JTQ0	380 aa		13.44	□□□□□ -0.26
SCAPER-219	ENST00000568382	DLL1	O00548	723 aa		13.44	□□□□□ -0.26
SCAPER-219	ENST00000568382	TBX10	O75333	385 aa		13.44	□□□□□ -0.26
SCAPER-219	ENST00000568382	ZNF202	O95125	648 aa		13.44	□□□□□ -0.26
SCAPER-219	ENST00000568382	PIGR	P01833	764 aa		13.44	□□□□□ -0.26
SCAPER-219	ENST00000568382	IDE	P14735	1019 aa		13.44	□□□□□ -0.26
SCAPER-219	ENST00000568382	GAP43	P17677	238 aa		13.44	□□□□□ -0.26
SCAPER-219	ENST00000568382	LIG4	P49917	911 aa		13.44	□□□□□ -0.26
SCAPER-219	ENST00000568382	NDUFA8	P51970	172 aa		13.44	□□□□□ -0.26
SCAPER-219	ENST00000568382	YARS	P54577	528 aa	Known RBP	13.44	□□□□□ -0.26
SCAPER-219	ENST00000568382	KCNC3	Q14003	757 aa		13.44	□□□□□ -0.26
SCAPER-219	ENST00000568382	NOLC1	Q14978	699 aa	Known RBP eCLIP	13.44	□□□□□ -0.26
SCAPER-219	ENST00000568382	SLC10A6	Q3KNW5	377 aa		13.44	□□□□□ -0.26
SCAPER-219	ENST00000568382	HERC4	Q5GLZ8	1057 aa	Predicted RBP	13.44	□□□□□ -0.26
SCAPER-219	ENST00000568382	GLRA4	Q5JXX5	417 aa		13.44	□□□□□ -0.26
SCAPER-219	ENST00000568382	SLC39A4	Q6P5W5	647 aa		13.44	□□□□□ -0.26
SCAPER-219	ENST00000568382	RNF168	Q8IYW5	571 aa	Predicted RBP	13.44	□□□□□ -0.26
SCAPER-219	ENST00000568382	VN1R2	Q8NFZ6	395 aa		13.44	□□□□□ -0.26
SCAPER-219	ENST00000568382	ZMAT2	Q96NC0	199 aa	Known RBP	13.44	□□□□□ -0.26
SCAPER-219	ENST00000568382	PPP1R10	Q96QC0	940 aa	Known RBP	13.44	□□□□□ -0.26
SCAPER-219	ENST00000568382	CDCA3	Q99618	268 aa	Predicted RBP	13.44	□□□□□ -0.26
SCAPER-219	ENST00000568382	STRA6	Q9BX79	667 aa		13.44	□□□□□ -0.26
SCAPER-219	ENST00000568382	IKZF4	Q9H2S9	585 aa		13.44	□□□□□ -0.26
SCAPER-219	ENST00000568382	MRPL44	Q9H9J2	332 aa	Known RBP	13.44	□□□□□ -0.26
SCAPER-219	ENST00000568382	LMBRD1	Q9NUN5	540 aa		13.44	□□□□□ -0.26
SCAPER-219	ENST00000568382	PANK4	Q9NVE7	773 aa		13.44	□□□□□ -0.26
SCAPER-219	ENST00000568382	CLEC1B	Q9P126	229 aa		13.44	□□□□□ -0.26
SCAPER-219	ENST00000568382	SEL1L	Q9UBV2	794 aa		13.44	□□□□□ -0.26
SCAPER-219	ENST00000568382	CASTOR2	A6NHX0	329 aa		13.43	□□□□□ -0.26
SCAPER-219	ENST00000568382	HNRNPDL	O14979	420 aa	Known RBP	13.43	□□□□□ -0.26
SCAPER-219	ENST00000568382	LILRB3	O75022	631 aa		13.43	□□□□□ -0.26
SCAPER-219	ENST00000568382	CLASP2	O75122	1294 aa	Known RBP	13.43	□□□□□ -0.26
SCAPER-219	ENST00000568382	PPP1R37	O75864	691 aa		13.43	□□□□□ -0.26
SCAPER-219	ENST00000568382	SMC2	O95347	1197 aa		13.43	□□□□□ -0.26
SCAPER-219	ENST00000568382	SOD2	P04179	222 aa		13.43	□□□□□ -0.26
SCAPER-219	ENST00000568382	IGFBP6	P24592	240 aa	Predicted RBP	13.43	□□□□□ -0.26
SCAPER-219	ENST00000568382	ABCD1	P33897	745 aa		13.43	□□□□□ -0.26
SCAPER-219	ENST00000568382	CA8	P35219	290 aa		13.43	□□□□□ -0.26
SCAPER-219	ENST00000568382	MATR3	P43243	847 aa	Known RBP eCLIP	13.43	□□□□□ -0.26
SCAPER-219	ENST00000568382	KCNA1	Q09470	495 aa		13.43	□□□□□ -0.26
SCAPER-219	ENST00000568382	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.43	□□□□□ -0.26
SCAPER-219	ENST00000568382	BMS1	Q14692	1282 aa	Known RBP	13.43	□□□□□ -0.26
SCAPER-219	ENST00000568382	MAP4K3	Q8IVH8	894 aa		13.43	□□□□□ -0.26
SCAPER-219	ENST00000568382	ELOA2	Q8IYF1	753 aa	Predicted RBP	13.43	□□□□□ -0.26
SCAPER-219	ENST00000568382	C7orf25	Q9BPX7	421 aa		13.43	□□□□□ -0.26
SCAPER-219	ENST00000568382	GPR62	Q9BZJ7	368 aa		13.43	□□□□□ -0.26
SCAPER-219	ENST00000568382	TRIM9	Q9C026	710 aa		13.43	□□□□□ -0.26
SCAPER-219	ENST00000568382	TOPORS	Q9NS56	1045 aa	Predicted RBP	13.43	□□□□□ -0.26
SCAPER-219	ENST00000568382	HPSE	Q9Y251	543 aa		13.43	□□□□□ -0.26
SCAPER-219	ENST00000568382	IRAK3	Q9Y616	596 aa		13.43	□□□□□ -0.26
SCAPER-219	ENST00000568382	PDCD11	Q14690	1871 aa	Known RBP	13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms