RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 CACNG4Q9UBN1 327 aa14.16□□□□□ -0.14
TSC2-220ENST00000568238 DPP7Q9UHL4 492 aa14.16□□□□□ -0.14
TSC2-220ENST00000568238 CFAP45Q9UL16 551 aa14.16□□□□□ -0.14
TSC2-220ENST00000568238 USTQ9Y2C2 406 aa14.16□□□□□ -0.14
TSC2-220ENST00000568238 GDAQ9Y2T3 454 aa14.16□□□□□ -0.14
TSC2-220ENST00000568238 PDCD11Q14690 1871 aaKnown RBP14.16□□□□□ -0.14
TSC2-220ENST00000568238 CASTOR2A6NHX0 329 aa14.15□□□□□ -0.14
TSC2-220ENST00000568238 K7ERI5 159 aa14.15□□□□□ -0.14
TSC2-220ENST00000568238 HIP1RO75146 1068 aa14.15□□□□□ -0.14
TSC2-220ENST00000568238 TADA2AO75478 443 aa14.15□□□□□ -0.14
TSC2-220ENST00000568238 KIF4AO95239 1232 aa14.15□□□□□ -0.14
TSC2-220ENST00000568238 LONP1P36776 959 aaKnown RBP14.15□□□□□ -0.14
TSC2-220ENST00000568238 NPTX2P47972 431 aa14.15□□□□□ -0.14
TSC2-220ENST00000568238 ME1P48163 572 aa14.15□□□□□ -0.14
TSC2-220ENST00000568238 CREMQ03060 361 aa14.15□□□□□ -0.14
TSC2-220ENST00000568238 MTMR3Q13615 1198 aa14.15□□□□□ -0.14
TSC2-220ENST00000568238 SPECC1Q5M775 1068 aa14.15□□□□□ -0.14
TSC2-220ENST00000568238 NT5DC1Q5TFE4 455 aa14.15□□□□□ -0.14
TSC2-220ENST00000568238 RINT1Q6NUQ1 792 aa14.15□□□□□ -0.14
TSC2-220ENST00000568238 C15orf39Q6ZRI6 1047 aa14.15□□□□□ -0.14
TSC2-220ENST00000568238 CCDC149Q6ZUS6 474 aa14.15□□□□□ -0.14
TSC2-220ENST00000568238 SUGP1Q8IWZ8 645 aaKnown RBP14.15□□□□□ -0.14
TSC2-220ENST00000568238 GPR65Q8IYL9 337 aa14.15□□□□□ -0.14
TSC2-220ENST00000568238 DAW1Q8N136 415 aa14.15□□□□□ -0.14
TSC2-220ENST00000568238 KREMEN2Q8NCW0 462 aa14.15□□□□□ -0.14
TSC2-220ENST00000568238 CMASQ8NFW8 434 aaPredicted RBP14.15□□□□□ -0.14
TSC2-220ENST00000568238 FEZF2Q8TBJ5 459 aa14.15□□□□□ -0.14
TSC2-220ENST00000568238 HASPINQ8TF76 798 aa14.15□□□□□ -0.14
TSC2-220ENST00000568238 PAAF1Q9BRP4 392 aa14.15□□□□□ -0.14
TSC2-220ENST00000568238 TIPINQ9BVW5 301 aa14.15□□□□□ -0.14
TSC2-220ENST00000568238 SORCS3Q9UPU3 1222 aa14.15□□□□□ -0.14
TSC2-220ENST00000568238 SRPRBQ9Y5M8 271 aaKnown RBP14.15□□□□□ -0.14
TSC2-220ENST00000568238 USP34Q70CQ2 3546 aa14.15□□□□□ -0.14
TSC2-220ENST00000568238 MYO15AQ9UKN7 3530 aa14.14□□□□□ -0.15
TSC2-220ENST00000568238 HYIQ5T013 277 aa14.14□□□□□ -0.15
TSC2-220ENST00000568238 KCNK18Q7Z418 384 aa14.14□□□□□ -0.15
TSC2-220ENST00000568238 UBALD2Q8IYN6 164 aa14.14□□□□□ -0.15
TSC2-220ENST00000568238 ZDHHC14Q8IZN3 488 aa14.14□□□□□ -0.15
TSC2-220ENST00000568238 PLCD3Q8N3E9 789 aa14.14□□□□□ -0.15
TSC2-220ENST00000568238 KCNG4Q8TDN1 519 aa14.14□□□□□ -0.15
TSC2-220ENST00000568238 RIN2Q8WYP3 895 aaPredicted RBP14.14□□□□□ -0.15
TSC2-220ENST00000568238 ACSF2Q96CM8 615 aaPredicted RBP14.14□□□□□ -0.15
TSC2-220ENST00000568238 ASIC4Q96FT7 647 aa14.14□□□□□ -0.15
TSC2-220ENST00000568238 MRPL4Q9BYD3 311 aaKnown RBP14.14□□□□□ -0.15
TSC2-220ENST00000568238 NT5C3AQ9H0P0 336 aa14.14□□□□□ -0.15
TSC2-220ENST00000568238 CXCL16Q9H2A7 254 aa14.14□□□□□ -0.15
TSC2-220ENST00000568238 KMT5AQ9NQR1 393 aa14.14□□□□□ -0.15
TSC2-220ENST00000568238 FNIP2Q9P278 1114 aa14.14□□□□□ -0.15
TSC2-220ENST00000568238 ARHGAP28Q9P2N2 729 aa14.14□□□□□ -0.15
TSC2-220ENST00000568238 TNFSF13BQ9Y275 285 aa14.14□□□□□ -0.15
TSC2-220ENST00000568238 MORC2Q9Y6X9 1032 aaPredicted RBP14.14□□□□□ -0.15
TSC2-220ENST00000568238 DOCK8Q8NF50 2099 aa14.14□□□□□ -0.15
TSC2-220ENST00000568238 DMDP11532 3685 aa14.13□□□□□ -0.15
TSC2-220ENST00000568238 PPP6R2O75170 966 aa14.13□□□□□ -0.15
TSC2-220ENST00000568238 C1RP00736 705 aa14.13□□□□□ -0.15
TSC2-220ENST00000568238 GUCY2CP25092 1073 aa14.13□□□□□ -0.15
TSC2-220ENST00000568238 UBA7P41226 1012 aa14.13□□□□□ -0.15
TSC2-220ENST00000568238 MAPK7Q13164 816 aa14.13□□□□□ -0.15
TSC2-220ENST00000568238 NAB2Q15742 525 aa14.13□□□□□ -0.15
TSC2-220ENST00000568238 ZNF568Q3ZCX4 644 aa14.13□□□□□ -0.15
TSC2-220ENST00000568238 RTP2Q5QGT7 225 aa14.13□□□□□ -0.15
TSC2-220ENST00000568238 C1orf186Q6ZWK4 172 aa14.13□□□□□ -0.15
TSC2-220ENST00000568238 OTOP3Q7RTS5 596 aa14.13□□□□□ -0.15
TSC2-220ENST00000568238 FBXL6Q8N531 539 aa14.13□□□□□ -0.15
TSC2-220ENST00000568238 KCTD17Q8N5Z5 321 aa14.13□□□□□ -0.15
TSC2-220ENST00000568238 RASSF8Q8NHQ8 419 aa14.13□□□□□ -0.15
TSC2-220ENST00000568238 HDAC7Q8WUI4 952 aa14.13□□□□□ -0.15
TSC2-220ENST00000568238 LEO1Q8WVC0 666 aaPredicted RBP14.13□□□□□ -0.15
TSC2-220ENST00000568238 CDK5RAP3Q96JB5 506 aa14.13□□□□□ -0.15
TSC2-220ENST00000568238 SPATA32Q96LK8 384 aa14.13□□□□□ -0.15
TSC2-220ENST00000568238 AK8Q96MA6 479 aa14.13□□□□□ -0.15
TSC2-220ENST00000568238 PLIN2Q99541 437 aa14.13□□□□□ -0.15
TSC2-220ENST00000568238 ACO2Q99798 780 aaKnown RBP14.13□□□□□ -0.15
TSC2-220ENST00000568238 TTPALQ9BTX7 342 aa14.13□□□□□ -0.15
TSC2-220ENST00000568238 TMEM134Q9H6X4 195 aa14.13□□□□□ -0.15
TSC2-220ENST00000568238 C17orf75Q9HAS0 396 aa14.13□□□□□ -0.15
TSC2-220ENST00000568238 GDPD2Q9HCC8 539 aa14.13□□□□□ -0.15
TSC2-220ENST00000568238 VPS13AQ96RL7 3174 aa14.12□□□□□ -0.15
TSC2-220ENST00000568238 CCDC195A0A1B0GUA6 201 aa14.12□□□□□ -0.15
TSC2-220ENST00000568238 TGM5O43548 720 aa14.12□□□□□ -0.15
TSC2-220ENST00000568238 RFPL2O75678 378 aa14.12□□□□□ -0.15
TSC2-220ENST00000568238 ASGR2P07307 311 aa14.12□□□□□ -0.15
TSC2-220ENST00000568238 MYBP10242 640 aa14.12□□□□□ -0.15
TSC2-220ENST00000568238 RPL17P18621 184 aaKnown RBP14.12□□□□□ -0.15
TSC2-220ENST00000568238 GRM5P41594 1212 aa14.12□□□□□ -0.15
TSC2-220ENST00000568238 YARSP54577 528 aaKnown RBP14.12□□□□□ -0.15
TSC2-220ENST00000568238 RAD51AP2Q09MP3 1159 aa14.12□□□□□ -0.15
TSC2-220ENST00000568238 ELAVL2Q12926 359 aaKnown RBP14.12□□□□□ -0.15
TSC2-220ENST00000568238 GLRA4Q5JXX5 417 aa14.12□□□□□ -0.15
TSC2-220ENST00000568238 FAM171A1Q5VUB5 890 aa14.12□□□□□ -0.15
TSC2-220ENST00000568238 CYP26C1Q6V0L0 522 aa14.12□□□□□ -0.15
TSC2-220ENST00000568238 USP49Q70CQ1 688 aa14.12□□□□□ -0.15
TSC2-220ENST00000568238 TAS1R3Q7RTX0 852 aa14.12□□□□□ -0.15
TSC2-220ENST00000568238 PALB2Q86YC2 1186 aa14.12□□□□□ -0.15
TSC2-220ENST00000568238 GLYCTKQ8IVS8 523 aa14.12□□□□□ -0.15
TSC2-220ENST00000568238 EPSTI1Q96J88 318 aa14.12□□□□□ -0.15
TSC2-220ENST00000568238 PNMA5Q96PV4 448 aa14.12□□□□□ -0.15
TSC2-220ENST00000568238 PPP1R10Q96QC0 940 aaKnown RBP14.12□□□□□ -0.15
TSC2-220ENST00000568238 CCDC94Q9BW85 323 aaPredicted RBP14.12□□□□□ -0.15
TSC2-220ENST00000568238 RHOBTB2Q9BYZ6 727 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms