RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 LOC102724428A0A0B4J2F2 783 aa11.58□□□□□ -0.56
PALB2-206ENST00000568219 NUDT17P0C025 328 aa11.58□□□□□ -0.56
PALB2-206ENST00000568219 RPS6KA3P51812 740 aa11.58□□□□□ -0.56
PALB2-206ENST00000568219 CACNB3P54284 484 aa11.58□□□□□ -0.56
PALB2-206ENST00000568219 SIK1P57059 783 aa11.58□□□□□ -0.56
PALB2-206ENST00000568219 PKN2Q16513 984 aaKnown RBP11.58□□□□□ -0.56
PALB2-206ENST00000568219 ZCWPW2Q504Y3 356 aa11.58□□□□□ -0.56
PALB2-206ENST00000568219 CENPUQ71F23 418 aa11.58□□□□□ -0.56
PALB2-206ENST00000568219 MFN1Q8IWA4 741 aa11.58□□□□□ -0.56
PALB2-206ENST00000568219 LRRC57Q8N9N7 239 aa11.58□□□□□ -0.56
PALB2-206ENST00000568219 SLC35C1Q96A29 364 aa11.58□□□□□ -0.56
PALB2-206ENST00000568219 C12orf65Q9H3J6 166 aaKnown RBP11.58□□□□□ -0.56
PALB2-206ENST00000568219 PRM3Q9NNZ6 103 aa11.58□□□□□ -0.56
PALB2-206ENST00000568219 ANKFY1Q9P2R3 1169 aa11.58□□□□□ -0.56
PALB2-206ENST00000568219 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.58□□□□□ -0.56
PALB2-206ENST00000568219 LOC100653049A0A140TA62 436 aa11.57□□□□□ -0.56
PALB2-206ENST00000568219 MAGEA13PA6NCF6 341 aa11.57□□□□□ -0.56
PALB2-206ENST00000568219 KRT34O76011 436 aa11.57□□□□□ -0.56
PALB2-206ENST00000568219 KRT1P04264 644 aa11.57□□□□□ -0.56
PALB2-206ENST00000568219 BMP3P12645 472 aa11.57□□□□□ -0.56
PALB2-206ENST00000568219 AKR1B1P15121 316 aa11.57□□□□□ -0.56
PALB2-206ENST00000568219 ATP6V1C1P21283 382 aa11.57□□□□□ -0.56
PALB2-206ENST00000568219 USP37Q86T82 979 aa11.57□□□□□ -0.56
PALB2-206ENST00000568219 FBXO11Q86XK2 927 aa11.57□□□□□ -0.56
PALB2-206ENST00000568219 OGFOD1Q8N543 542 aa11.57□□□□□ -0.56
PALB2-206ENST00000568219 C1orf131Q8NDD1 294 aaKnown RBP11.57□□□□□ -0.56
PALB2-206ENST00000568219 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.57□□□□□ -0.56
PALB2-206ENST00000568219 EZH1Q92800 747 aaPredicted RBP11.57□□□□□ -0.56
PALB2-206ENST00000568219 DNAJC19Q96DA6 116 aa11.57□□□□□ -0.56
PALB2-206ENST00000568219 HES6Q96HZ4 224 aa11.57□□□□□ -0.56
PALB2-206ENST00000568219 SYT15Q9BQS2 421 aa11.57□□□□□ -0.56
PALB2-206ENST00000568219 TSSK1BQ9BXA7 367 aa11.57□□□□□ -0.56
PALB2-206ENST00000568219 DDX18Q9NVP1 670 aaKnown RBP11.57□□□□□ -0.56
PALB2-206ENST00000568219 IGSF9BQ9UPX0 1349 aa11.57□□□□□ -0.56
PALB2-206ENST00000568219 ZBTB39O15060 712 aa11.57□□□□□ -0.56
PALB2-206ENST00000568219 GNPATO15228 680 aa11.57□□□□□ -0.56
PALB2-206ENST00000568219 CD19P15391 556 aa11.57□□□□□ -0.56
PALB2-206ENST00000568219 TAL1P17542 331 aaPredicted RBP11.57□□□□□ -0.56
PALB2-206ENST00000568219 MTMR2Q13614 643 aa11.57□□□□□ -0.56
PALB2-206ENST00000568219 LMBRD2Q68DH5 695 aaPredicted RBP11.57□□□□□ -0.56
PALB2-206ENST00000568219 TLDC1Q6P9B6 456 aa11.57□□□□□ -0.56
PALB2-206ENST00000568219 CPXCR1Q8N123 301 aa11.57□□□□□ -0.56
PALB2-206ENST00000568219 EIF1ADQ8N9N8 165 aaKnown RBP11.57□□□□□ -0.56
PALB2-206ENST00000568219 MTBPQ96DY7 904 aa11.57□□□□□ -0.56
PALB2-206ENST00000568219 MOV10L1Q9BXT6 1211 aaKnown RBP11.57□□□□□ -0.56
PALB2-206ENST00000568219 MAK16Q9BXY0 300 aaKnown RBP11.57□□□□□ -0.56
PALB2-206ENST00000568219 DENND2DQ9H6A0 471 aaPredicted RBP11.57□□□□□ -0.56
PALB2-206ENST00000568219 BCAS3Q9H6U6 928 aa11.57□□□□□ -0.56
PALB2-206ENST00000568219 TMEM165Q9HC07 324 aa11.57□□□□□ -0.56
PALB2-206ENST00000568219 SPECC1L-ADORA2AF8WAN1 911 aa11.57□□□□□ -0.56
PALB2-206ENST00000568219 LPXNO60711 386 aa11.57□□□□□ -0.56
PALB2-206ENST00000568219 STK10O94804 968 aaKnown RBP11.57□□□□□ -0.56
PALB2-206ENST00000568219 KRT10P13645 584 aa11.57□□□□□ -0.56
PALB2-206ENST00000568219 AP2B1P63010 937 aa11.57□□□□□ -0.56
PALB2-206ENST00000568219 KLRC3Q07444 240 aa11.57□□□□□ -0.56
PALB2-206ENST00000568219 GRIK3Q13003 919 aa11.57□□□□□ -0.56
PALB2-206ENST00000568219 MMEL1Q495T6 779 aa11.57□□□□□ -0.56
PALB2-206ENST00000568219 CPNE8Q86YQ8 564 aa11.57□□□□□ -0.56
PALB2-206ENST00000568219 KAT5Q92993 513 aa11.57□□□□□ -0.56
PALB2-206ENST00000568219 NSL1Q96IY1 281 aa11.57□□□□□ -0.56
PALB2-206ENST00000568219 L3MBTL3Q96JM7 780 aaPredicted RBP11.57□□□□□ -0.56
PALB2-206ENST00000568219 NMRK1Q9NWW6 199 aa11.57□□□□□ -0.56
PALB2-206ENST00000568219 TRAF3IP3Q9Y228 551 aa11.57□□□□□ -0.56
PALB2-206ENST00000568219 LRCH1Q9Y2L9 728 aa11.57□□□□□ -0.56
PALB2-206ENST00000568219 RBAK-RBAKDNI3L0D1 243 aa11.56□□□□□ -0.56
PALB2-206ENST00000568219 RTN2O75298 545 aa11.56□□□□□ -0.56
PALB2-206ENST00000568219 PAEPP09466 180 aa11.56□□□□□ -0.56
PALB2-206ENST00000568219 PTPN4P29074 926 aa11.56□□□□□ -0.56
PALB2-206ENST00000568219 ECHS1P30084 290 aa11.56□□□□□ -0.56
PALB2-206ENST00000568219 MAN1A1P33908 653 aa11.56□□□□□ -0.56
PALB2-206ENST00000568219 MED21Q13503 144 aa11.56□□□□□ -0.56
PALB2-206ENST00000568219 MTFR1Q15390 333 aa11.56□□□□□ -0.56
PALB2-206ENST00000568219 QRICH1Q2TAL8 776 aa11.56□□□□□ -0.56
PALB2-206ENST00000568219 KHDC1Q4VXA5 237 aaKnown RBP11.56□□□□□ -0.56
PALB2-206ENST00000568219 ANO7Q6IWH7 933 aa11.56□□□□□ -0.56
PALB2-206ENST00000568219 POMGNT1Q8WZA1 660 aa11.56□□□□□ -0.56
PALB2-206ENST00000568219 CFAP36Q96G28 342 aa11.56□□□□□ -0.56
PALB2-206ENST00000568219 DNAJC18Q9H819 358 aa11.56□□□□□ -0.56
PALB2-206ENST00000568219 LINGO3P0C6S8 592 aa11.56□□□□□ -0.56
PALB2-206ENST00000568219 RPA3P35244 121 aaPredicted RBP11.56□□□□□ -0.56
PALB2-206ENST00000568219 VAMP7P51809 220 aa11.56□□□□□ -0.56
PALB2-206ENST00000568219 TRIP10Q15642 601 aa11.56□□□□□ -0.56
PALB2-206ENST00000568219 CWF19L1Q69YN2 538 aaKnown RBP11.56□□□□□ -0.56
PALB2-206ENST00000568219 TTC27Q6P3X3 843 aa11.56□□□□□ -0.56
PALB2-206ENST00000568219 LRRC74BQ6ZQY2 392 aa11.56□□□□□ -0.56
PALB2-206ENST00000568219 RHPN2Q8IUC4 686 aa11.56□□□□□ -0.56
PALB2-206ENST00000568219 NEDD1Q8NHV4 660 aa11.56□□□□□ -0.56
PALB2-206ENST00000568219 AGR3Q8TD06 166 aa11.56□□□□□ -0.56
PALB2-206ENST00000568219 TXNDC16Q9P2K2 825 aa11.56□□□□□ -0.56
PALB2-206ENST00000568219 RIC1Q4ADV7 1423 aa11.56□□□□□ -0.56
PALB2-206ENST00000568219 ZBTB5O15062 677 aa11.56□□□□□ -0.56
PALB2-206ENST00000568219 GIT2Q14161 759 aa11.56□□□□□ -0.56
PALB2-206ENST00000568219 CBWD6Q4V339 395 aa11.56□□□□□ -0.56
PALB2-206ENST00000568219 CBWD3Q5JTY5 395 aa11.56□□□□□ -0.56
PALB2-206ENST00000568219 CBWD5Q5RIA9 395 aa11.56□□□□□ -0.56
PALB2-206ENST00000568219 MAP7D3Q8IWC1 876 aa11.56□□□□□ -0.56
PALB2-206ENST00000568219 ZNF34Q8IZ26 560 aa11.56□□□□□ -0.56
PALB2-206ENST00000568219 CYP4X1Q8N118 509 aa11.56□□□□□ -0.56
PALB2-206ENST00000568219 PPM1NQ8N819 430 aa11.56□□□□□ -0.56
PALB2-206ENST00000568219 EIF2AK1Q9BQI3 630 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms