RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 PVALEFA0A1B0GWK0 134 aa6.83□□□□□ -1.32
CAPN3-218ENST00000568153 MAFGO15525 162 aa6.83□□□□□ -1.32
CAPN3-218ENST00000568153 ADAMTS4O75173 837 aa6.83□□□□□ -1.32
CAPN3-218ENST00000568153 SLITRK5O94991 958 aa6.83□□□□□ -1.32
CAPN3-218ENST00000568153 CST3P01034 146 aaPredicted RBP6.83□□□□□ -1.32
CAPN3-218ENST00000568153 PTMAP06454 111 aaKnown RBP6.83□□□□□ -1.32
CAPN3-218ENST00000568153 TPM3P06753 285 aa6.83□□□□□ -1.32
CAPN3-218ENST00000568153 FOSL1P15407 271 aa6.83□□□□□ -1.32
CAPN3-218ENST00000568153 CDK11BP21127 795 aaKnown RBP6.83□□□□□ -1.32
CAPN3-218ENST00000568153 RPA1P27694 616 aa6.83□□□□□ -1.32
CAPN3-218ENST00000568153 CASP1P29466 404 aa6.83□□□□□ -1.32
CAPN3-218ENST00000568153 FKBP1BP68106 108 aa6.83□□□□□ -1.32
CAPN3-218ENST00000568153 UBXN2AP68543 259 aa6.83□□□□□ -1.32
CAPN3-218ENST00000568153 IRX3P78415 501 aaPredicted RBP6.83□□□□□ -1.32
CAPN3-218ENST00000568153 SETQ01105 290 aaPredicted RBP6.83□□□□□ -1.32
CAPN3-218ENST00000568153 MYL5Q02045 173 aa6.83□□□□□ -1.32
CAPN3-218ENST00000568153 SNAPC2Q13487 334 aa6.83□□□□□ -1.32
CAPN3-218ENST00000568153 DHX8Q14562 1220 aaKnown RBP6.83□□□□□ -1.32
CAPN3-218ENST00000568153 KCNB1Q14721 858 aa6.83□□□□□ -1.32
CAPN3-218ENST00000568153 MSMPQ1L6U9 139 aa6.83□□□□□ -1.32
CAPN3-218ENST00000568153 TMEM119Q4V9L6 283 aa6.83□□□□□ -1.32
CAPN3-218ENST00000568153 TREML2Q5T2D2 321 aa6.83□□□□□ -1.32
CAPN3-218ENST00000568153 ZNF658Q5TYW1 1059 aaPredicted RBP6.83□□□□□ -1.32
CAPN3-218ENST00000568153 NCAPH2Q6IBW4 605 aa6.83□□□□□ -1.32
CAPN3-218ENST00000568153 SARM1Q6SZW1 724 aa6.83□□□□□ -1.32
CAPN3-218ENST00000568153 LBX2Q6XYB7 198 aa6.83□□□□□ -1.32
CAPN3-218ENST00000568153 OTOP1Q7RTM1 612 aa6.83□□□□□ -1.32
CAPN3-218ENST00000568153 VSIG10LQ86VR7 867 aa6.83□□□□□ -1.32
CAPN3-218ENST00000568153 DRC7Q8IY82 874 aa6.83□□□□□ -1.32
CAPN3-218ENST00000568153 C2orf69Q8N8R5 385 aa6.83□□□□□ -1.32
CAPN3-218ENST00000568153 NSUN6Q8TEA1 469 aaKnown RBP6.83□□□□□ -1.32
CAPN3-218ENST00000568153 RAD54LQ92698 747 aa6.83□□□□□ -1.32
CAPN3-218ENST00000568153 SLC5A5Q92911 643 aa6.83□□□□□ -1.32
CAPN3-218ENST00000568153 GJA10Q969M2 543 aa6.83□□□□□ -1.32
CAPN3-218ENST00000568153 LENG9Q96B70 501 aa6.83□□□□□ -1.32
CAPN3-218ENST00000568153 OPTNQ96CV9 577 aa6.83□□□□□ -1.32
CAPN3-218ENST00000568153 WNK4Q96J92 1243 aa6.83□□□□□ -1.32
CAPN3-218ENST00000568153 RIT2Q99578 217 aa6.83□□□□□ -1.32
CAPN3-218ENST00000568153 ZNF577Q9BSK1 485 aa6.83□□□□□ -1.32
CAPN3-218ENST00000568153 POLR3CQ9BUI4 534 aaPredicted RBP6.83□□□□□ -1.32
CAPN3-218ENST00000568153 WDR11Q9BZH6 1224 aa6.83□□□□□ -1.32
CAPN3-218ENST00000568153 ACAD9Q9H845 621 aa6.83□□□□□ -1.32
CAPN3-218ENST00000568153 JADE2Q9NQC1 790 aa6.83□□□□□ -1.32
CAPN3-218ENST00000568153 FBXO40Q9UH90 709 aa6.83□□□□□ -1.32
CAPN3-218ENST00000568153 INPP5FQ9Y2H2 1132 aa6.83□□□□□ -1.32
CAPN3-218ENST00000568153 UBIAD1Q9Y5Z9 338 aa6.83□□□□□ -1.32
CAPN3-218ENST00000568153 RPTORQ8N122 1335 aa6.82□□□□□ -1.32
CAPN3-218ENST00000568153 KDM3AQ9Y4C1 1321 aa6.82□□□□□ -1.32
CAPN3-218ENST00000568153 GOLGA6L6A8MZA4 724 aa6.82□□□□□ -1.32
CAPN3-218ENST00000568153 CHURC1-FNTBB4DL54 471 aa6.82□□□□□ -1.32
CAPN3-218ENST00000568153 IPO5O00410 1097 aaKnown RBP6.82□□□□□ -1.32
CAPN3-218ENST00000568153 AP5Z1O43299 807 aa6.82□□□□□ -1.32
CAPN3-218ENST00000568153 GAS7O60861 476 aa6.82□□□□□ -1.32
CAPN3-218ENST00000568153 PSMD10O75832 226 aa6.82□□□□□ -1.32
CAPN3-218ENST00000568153 RHOBTB3O94955 611 aa6.82□□□□□ -1.32
CAPN3-218ENST00000568153 SLC25A27O95847 323 aa6.82□□□□□ -1.32
CAPN3-218ENST00000568153 ARP10275 920 aa6.82□□□□□ -1.32
CAPN3-218ENST00000568153 MYCLP12524 364 aaPredicted RBP6.82□□□□□ -1.32
CAPN3-218ENST00000568153 ITGB5P18084 799 aa6.82□□□□□ -1.32
CAPN3-218ENST00000568153 MUTP22033 750 aa6.82□□□□□ -1.32
CAPN3-218ENST00000568153 CCND2P30279 289 aa6.82□□□□□ -1.32
CAPN3-218ENST00000568153 PPP1R2P41236 205 aa6.82□□□□□ -1.32
CAPN3-218ENST00000568153 ZNF75DP51815 510 aa6.82□□□□□ -1.32
CAPN3-218ENST00000568153 PPP2R5CQ13362 524 aa6.82□□□□□ -1.32
CAPN3-218ENST00000568153 STIM1Q13586 685 aa6.82□□□□□ -1.32
CAPN3-218ENST00000568153 NCAPHQ15003 741 aa6.82□□□□□ -1.32
CAPN3-218ENST00000568153 EPHA7Q15375 998 aa6.82□□□□□ -1.32
CAPN3-218ENST00000568153 TPD52L1Q16890 204 aaPredicted RBP6.82□□□□□ -1.32
CAPN3-218ENST00000568153 LRCH2Q5VUJ6 765 aa6.82□□□□□ -1.32
CAPN3-218ENST00000568153 SPATA1Q5VX52 437 aa6.82□□□□□ -1.32
CAPN3-218ENST00000568153 HAUS3Q68CZ6 603 aa6.82□□□□□ -1.32
CAPN3-218ENST00000568153 CNNM4Q6P4Q7 775 aa6.82□□□□□ -1.32
CAPN3-218ENST00000568153 NLRX1Q86UT6 975 aa6.82□□□□□ -1.32
CAPN3-218ENST00000568153 CATSPER3Q86XQ3 398 aa6.82□□□□□ -1.32
CAPN3-218ENST00000568153 RIOX2Q8IUF8 465 aa6.82□□□□□ -1.32
CAPN3-218ENST00000568153 ANKRD35Q8N283 1001 aa6.82□□□□□ -1.32
CAPN3-218ENST00000568153 MFSD2AQ8NA29 543 aa6.82□□□□□ -1.32
CAPN3-218ENST00000568153 FAM13CQ8NE31 585 aa6.82□□□□□ -1.32
CAPN3-218ENST00000568153 RIN3Q8TB24 985 aa6.82□□□□□ -1.32
CAPN3-218ENST00000568153 LARP4BQ92615 738 aaKnown RBP6.82□□□□□ -1.32
CAPN3-218ENST00000568153 IWS1Q96ST2 819 aa6.82□□□□□ -1.32
CAPN3-218ENST00000568153 HSD17B14Q9BPX1 270 aa6.82□□□□□ -1.32
CAPN3-218ENST00000568153 EIF2AK1Q9BQI3 630 aaKnown RBP6.82□□□□□ -1.32
CAPN3-218ENST00000568153 PDCD2LQ9BRP1 358 aa6.82□□□□□ -1.32
CAPN3-218ENST00000568153 ASCC2Q9H1I8 757 aaPredicted RBP6.82□□□□□ -1.32
CAPN3-218ENST00000568153 ZNF408Q9H9D4 720 aa6.82□□□□□ -1.32
CAPN3-218ENST00000568153 PXMP2Q9NR77 195 aa6.82□□□□□ -1.32
CAPN3-218ENST00000568153 TBC1D22BQ9NU19 505 aa6.82□□□□□ -1.32
CAPN3-218ENST00000568153 BLOC1S4Q9NUP1 217 aa6.82□□□□□ -1.32
CAPN3-218ENST00000568153 FANCLQ9NW38 375 aa6.82□□□□□ -1.32
CAPN3-218ENST00000568153 COL20A1Q9P218 1284 aa6.82□□□□□ -1.32
CAPN3-218ENST00000568153 KLHL3Q9UH77 587 aa6.82□□□□□ -1.32
CAPN3-218ENST00000568153 ZNF214Q9UL59 606 aaPredicted RBP6.82□□□□□ -1.32
CAPN3-218ENST00000568153 AGTPBP1Q9UPW5 1226 aa6.82□□□□□ -1.32
CAPN3-218ENST00000568153 MYMKA6NI61 221 aa6.81□□□□□ -1.32
CAPN3-218ENST00000568153 B4DLN1 442 aa6.81□□□□□ -1.32
CAPN3-218ENST00000568153 E9PMD0 336 aa6.81□□□□□ -1.32
CAPN3-218ENST00000568153 TRAF5O00463 557 aa6.81□□□□□ -1.32
CAPN3-218ENST00000568153 CBFA2T2O43439 604 aa6.81□□□□□ -1.32
CAPN3-218ENST00000568153 KLRC4O43908 158 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms