RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 C2orf42Q9NWW7 574 aa10.88□□□□□ -0.67
CAPN3-216ENST00000567071 ADAM28Q9UKQ2 775 aa10.88□□□□□ -0.67
CAPN3-216ENST00000567071 SPTAN1Q13813 2472 aaKnown RBP10.87□□□□□ -0.67
CAPN3-216ENST00000567071 SF3B1O75533 1304 aaKnown RBP eCLIP10.87□□□□□ -0.67
CAPN3-216ENST00000567071 SLC38A8A6NNN8 435 aa10.87□□□□□ -0.67
CAPN3-216ENST00000567071 UPK3BL1B0FP48 263 aa10.87□□□□□ -0.67
CAPN3-216ENST00000567071 UPK3BL2E5RIL1 263 aa10.87□□□□□ -0.67
CAPN3-216ENST00000567071 ZNF197O14709 1029 aa10.87□□□□□ -0.67
CAPN3-216ENST00000567071 EFEMP2O95967 443 aa10.87□□□□□ -0.67
CAPN3-216ENST00000567071 FCARP24071 287 aa10.87□□□□□ -0.67
CAPN3-216ENST00000567071 CHMLP26374 656 aa10.87□□□□□ -0.67
CAPN3-216ENST00000567071 DNM2P50570 870 aa10.87□□□□□ -0.67
CAPN3-216ENST00000567071 NMIQ13287 307 aaPredicted RBP10.87□□□□□ -0.67
CAPN3-216ENST00000567071 ITGB3BPQ13352 177 aaPredicted RBP10.87□□□□□ -0.67
CAPN3-216ENST00000567071 GRM4Q14833 912 aa10.87□□□□□ -0.67
CAPN3-216ENST00000567071 FAM78AQ5JUQ0 283 aa10.87□□□□□ -0.67
CAPN3-216ENST00000567071 PDXDC1Q6P996 788 aa10.87□□□□□ -0.67
CAPN3-216ENST00000567071 CASC1Q6TDU7 716 aa10.87□□□□□ -0.67
CAPN3-216ENST00000567071 PRSS55Q6UWB4 352 aaPredicted RBP10.87□□□□□ -0.67
CAPN3-216ENST00000567071 VITQ6UXI7 678 aa10.87□□□□□ -0.67
CAPN3-216ENST00000567071 RALGPS2Q86X27 583 aaPredicted RBP10.87□□□□□ -0.67
CAPN3-216ENST00000567071 LINC01465Q8N7H1 131 aa10.87□□□□□ -0.67
CAPN3-216ENST00000567071 KRT23Q9C075 422 aa10.87□□□□□ -0.67
CAPN3-216ENST00000567071 CNNM2Q9H8M5 875 aa10.87□□□□□ -0.67
CAPN3-216ENST00000567071 AGO4Q9HCK5 861 aaKnown RBP10.87□□□□□ -0.67
CAPN3-216ENST00000567071 AVENQ9NQS1 362 aaPredicted RBP10.87□□□□□ -0.67
CAPN3-216ENST00000567071 ZSWIM5Q9P217 1185 aa10.87□□□□□ -0.67
CAPN3-216ENST00000567071 THADAQ6YHU6 1953 aa10.86□□□□□ -0.67
CAPN3-216ENST00000567071 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.86□□□□□ -0.67
CAPN3-216ENST00000567071 A0A0D9SFI3 127 aa10.86□□□□□ -0.67
CAPN3-216ENST00000567071 CCDC194A0A1B0GVG4 234 aa10.86□□□□□ -0.67
CAPN3-216ENST00000567071 SPECC1L-ADORA2AF8WAN1 911 aa10.86□□□□□ -0.67
CAPN3-216ENST00000567071 CYTH3O43739 400 aa10.86□□□□□ -0.67
CAPN3-216ENST00000567071 ZNF862O60290 1169 aa10.86□□□□□ -0.67
CAPN3-216ENST00000567071 TADA2AO75478 443 aa10.86□□□□□ -0.67
CAPN3-216ENST00000567071 CCNE2O96020 404 aa10.86□□□□□ -0.67
CAPN3-216ENST00000567071 ITGA4P13612 1032 aa10.86□□□□□ -0.67
CAPN3-216ENST00000567071 PTPN2P17706 415 aa10.86□□□□□ -0.67
CAPN3-216ENST00000567071 ATP4AP20648 1035 aa10.86□□□□□ -0.67
CAPN3-216ENST00000567071 MAPK8P45983 427 aa10.86□□□□□ -0.67
CAPN3-216ENST00000567071 AFF1P51825 1210 aaKnown RBP10.86□□□□□ -0.67
CAPN3-216ENST00000567071 ATXN3P54252 364 aaPredicted RBP10.86□□□□□ -0.67
CAPN3-216ENST00000567071 IRX4P78413 519 aa10.86□□□□□ -0.67
CAPN3-216ENST00000567071 PSMD5Q16401 504 aa10.86□□□□□ -0.67
CAPN3-216ENST00000567071 CWC27Q6UX04 472 aaKnown RBP10.86□□□□□ -0.67
CAPN3-216ENST00000567071 CCNI2Q6ZMN8 369 aaPredicted RBP10.86□□□□□ -0.67
CAPN3-216ENST00000567071 MRPL10Q7Z7H8 261 aaKnown RBP10.86□□□□□ -0.67
CAPN3-216ENST00000567071 PIP4P1Q86T03 277 aa10.86□□□□□ -0.67
CAPN3-216ENST00000567071 MFSD6LQ8IWD5 586 aa10.86□□□□□ -0.67
CAPN3-216ENST00000567071 SCUBE3Q8IX30 993 aa10.86□□□□□ -0.67
CAPN3-216ENST00000567071 CNNM3Q8NE01 707 aa10.86□□□□□ -0.67
CAPN3-216ENST00000567071 SMARCD2Q92925 531 aa10.86□□□□□ -0.67
CAPN3-216ENST00000567071 E2F7Q96AV8 911 aa10.86□□□□□ -0.67
CAPN3-216ENST00000567071 FAM227BQ96M60 508 aa10.86□□□□□ -0.67
CAPN3-216ENST00000567071 ASB16Q96NS5 453 aa10.86□□□□□ -0.67
CAPN3-216ENST00000567071 BACH2Q9BYV9 841 aa10.86□□□□□ -0.67
CAPN3-216ENST00000567071 GPR62Q9BZJ7 368 aa10.86□□□□□ -0.67
CAPN3-216ENST00000567071 NRBP2Q9NSY0 501 aa10.86□□□□□ -0.67
CAPN3-216ENST00000567071 PCDHA6Q9UN73 950 aa10.86□□□□□ -0.67
CAPN3-216ENST00000567071 PCDHA8Q9Y5H6 950 aa10.86□□□□□ -0.67
CAPN3-216ENST00000567071 COL6A6A6NMZ7 2263 aa10.85□□□□□ -0.67
CAPN3-216ENST00000567071 LRG1P02750 347 aa10.85□□□□□ -0.67
CAPN3-216ENST00000567071 PSAPP07602 524 aa10.85□□□□□ -0.67
CAPN3-216ENST00000567071 ZNF76P36508 570 aa10.85□□□□□ -0.67
CAPN3-216ENST00000567071 DSC1Q08554 894 aa10.85□□□□□ -0.67
CAPN3-216ENST00000567071 CCINQ13939 588 aa10.85□□□□□ -0.67
CAPN3-216ENST00000567071 PON2Q15165 354 aa10.85□□□□□ -0.67
CAPN3-216ENST00000567071 SLC5A9Q2M3M2 681 aa10.85□□□□□ -0.67
CAPN3-216ENST00000567071 SLC35G1Q2M3R5 365 aa10.85□□□□□ -0.67
CAPN3-216ENST00000567071 CEP55Q53EZ4 464 aa10.85□□□□□ -0.67
CAPN3-216ENST00000567071 HAUS6Q7Z4H7 955 aa10.85□□□□□ -0.67
CAPN3-216ENST00000567071 ZNF410Q86VK4 478 aa10.85□□□□□ -0.67
CAPN3-216ENST00000567071 CEP57Q86XR8 500 aa10.85□□□□□ -0.67
CAPN3-216ENST00000567071 CLSTN3Q9BQT9 956 aa10.85□□□□□ -0.67
CAPN3-216ENST00000567071 TTPALQ9BTX7 342 aa10.85□□□□□ -0.67
CAPN3-216ENST00000567071 IL25Q9H293 177 aa10.85□□□□□ -0.67
CAPN3-216ENST00000567071 DKK4Q9UBT3 224 aa10.85□□□□□ -0.67
CAPN3-216ENST00000567071 EVLQ9UI08 416 aaPredicted RBP10.85□□□□□ -0.67
CAPN3-216ENST00000567071 MAFBQ9Y5Q3 323 aaPredicted RBP10.85□□□□□ -0.67
CAPN3-216ENST00000567071 PI4KAP42356 2102 aa10.84□□□□□ -0.67
CAPN3-216ENST00000567071 ABCA7Q8IZY2 2146 aa10.84□□□□□ -0.67
CAPN3-216ENST00000567071 A0A087WV48 116 aa10.84□□□□□ -0.67
CAPN3-216ENST00000567071 A0A087WZ62 844 aa10.84□□□□□ -0.67
CAPN3-216ENST00000567071 MYBPHLA2RUH7 354 aa10.84□□□□□ -0.67
CAPN3-216ENST00000567071 PATE3B3GLJ2 98 aa10.84□□□□□ -0.67
CAPN3-216ENST00000567071 F8W810 466 aa10.84□□□□□ -0.67
CAPN3-216ENST00000567071 HIP1O00291 1037 aa10.84□□□□□ -0.67
CAPN3-216ENST00000567071 CHADO15335 359 aa10.84□□□□□ -0.67
CAPN3-216ENST00000567071 MEFVO15553 781 aaPredicted RBP10.84□□□□□ -0.67
CAPN3-216ENST00000567071 HOXC13P31276 330 aa10.84□□□□□ -0.67
CAPN3-216ENST00000567071 CTHP32929 405 aa10.84□□□□□ -0.67
CAPN3-216ENST00000567071 SOX9P48436 509 aa10.84□□□□□ -0.67
CAPN3-216ENST00000567071 SEMA3BQ13214 749 aa10.84□□□□□ -0.67
CAPN3-216ENST00000567071 UBE2SQ16763 222 aa10.84□□□□□ -0.67
CAPN3-216ENST00000567071 TRIM61Q5EBN2 209 aa10.84□□□□□ -0.67
CAPN3-216ENST00000567071 PDZD4Q76G19 769 aaPredicted RBP10.84□□□□□ -0.67
CAPN3-216ENST00000567071 ADAMTS14Q8WXS8 1223 aa10.84□□□□□ -0.67
CAPN3-216ENST00000567071 CORO1BQ9BR76 489 aa10.84□□□□□ -0.67
CAPN3-216ENST00000567071 FDXACB1Q9BRP7 624 aaPredicted RBP10.84□□□□□ -0.67
CAPN3-216ENST00000567071 ESYT1Q9BSJ8 1104 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms