RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 ACTRT1Q8TDG2 376 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 DPF3Q92784 378 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 PRICKLE1Q96MT3 831 aaPredicted RBP3.09□□□□□ -1.91
CHD9-218ENST00000566029 NFAT5O94916 1531 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 MICAL3Q7RTP6 2002 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 XPO1O14980 1071 aaKnown RBP3.09□□□□□ -1.91
CHD9-218ENST00000566029 GSC2O15499 205 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 ADRA2BP18089 450 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 DRG2P55039 364 aaKnown RBP3.09□□□□□ -1.91
CHD9-218ENST00000566029 CREB5Q02930 508 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 CAMK2BQ13554 666 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 AKIRIN2Q53H80 203 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 GRAMD4Q6IC98 578 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 NLRP9Q7RTR0 991 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 PALB2Q86YC2 1186 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 TAGAPQ8N103 731 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 MS4A14Q96JA4 679 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 PACSIN1Q9BY11 444 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 NUF2Q9BZD4 464 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 ANKRD2Q9GZV1 360 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 DDX28Q9NUL7 540 aaKnown RBP3.09□□□□□ -1.91
CHD9-218ENST00000566029 BTBD7Q9P203 1132 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 RASAL2Q9UJF2 1139 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 PLA2G4CQ9UP65 541 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 AGTPBP1Q9UPW5 1226 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 CCDC169A6NNP5 214 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 ZBTB43O43298 467 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 ZNF862O60290 1169 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 OR6B1O95007 311 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 TFAP2AP05549 437 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 ETS2P15036 469 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 ANPEPP15144 967 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 RGS2P41220 211 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 UBA7P41226 1012 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 HAND2P61296 217 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 ZNF568Q3ZCX4 644 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 VSIG1Q86XK7 387 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 CGREF1Q99674 301 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 CCSER1Q9C0I3 900 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 AASDHPPTQ9NRN7 309 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 A0A087X0T9 212 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 POTEFA5A3E0 1075 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 GNAT3A8MTJ3 354 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 EIF3FO00303 357 aaPredicted RBP3.09□□□□□ -1.91
CHD9-218ENST00000566029 RASGRF2O14827 1237 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 PEX1O43933 1283 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 CBFA2T3O75081 653 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 CSF1RP07333 972 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 FAM228BP0C875 321 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 POTEIP0CG38 1075 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 SMIM18P0DKX4 95 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 CYP11B2P19099 503 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 MUTP22033 750 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 RFX1P22670 979 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 TUFMP49411 452 aaKnown RBP3.09□□□□□ -1.91
CHD9-218ENST00000566029 WDR4P57081 412 aaKnown RBP3.09□□□□□ -1.91
CHD9-218ENST00000566029 C1orf141Q5JVX7 400 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 NXNQ6DKJ4 435 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 POTEEQ6S8J3 1075 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 NME8Q8N427 588 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 PLEKHO2Q8TD55 490 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 EPS8L3Q8TE67 593 aaKnown RBP3.09□□□□□ -1.91
CHD9-218ENST00000566029 LRRC15Q8TF66 581 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 ATP6V0A1Q93050 837 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 EURLQ9NYK6 297 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 C9orf78Q9NZ63 289 aaPredicted RBP3.09□□□□□ -1.91
CHD9-218ENST00000566029 CROTQ9UKG9 612 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 MAD1L1Q9Y6D9 718 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 E9PBE3 544 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 TCEA3O75764 348 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 PRCPP42785 496 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 DAB2P98082 770 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 APOFQ13790 326 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 ASIC2Q16515 512 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 MUM1Q2TAK8 710 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 RABL6Q3YEC7 729 aaPredicted RBP3.09□□□□□ -1.92
CHD9-218ENST00000566029 ANKRD40Q6AI12 368 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 RHBDF2Q6PJF5 856 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 ZBED8Q8IZ13 594 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 BBS5Q8N3I7 341 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 CRACR2BQ8N4Y2 399 aaPredicted RBP3.09□□□□□ -1.92
CHD9-218ENST00000566029 CERKQ8TCT0 537 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 ZNF398Q8TD17 642 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 DDX50Q9BQ39 737 aaKnown RBP3.09□□□□□ -1.92
CHD9-218ENST00000566029 FADS3Q9Y5Q0 445 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 SH3PXD2BA1X283 911 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 BTBD11A6QL63 1104 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 STK25O00506 426 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 TMEM253P0C7T8 217 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 KRT3P12035 628 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 EPHB2P29323 1055 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 ATP6V1E1P36543 226 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 ALDH3B2P48448 385 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 POLGP54098 1239 aaPredicted RBP3.09□□□□□ -1.92
CHD9-218ENST00000566029 PLIN5Q00G26 463 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 DHX34Q14147 1143 aaKnown RBP3.09□□□□□ -1.92
CHD9-218ENST00000566029 IL17AQ16552 155 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 THOC7Q6I9Y2 204 aaKnown RBP3.09□□□□□ -1.92
CHD9-218ENST00000566029 CEP70Q8NHQ1 597 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 U2AF1L4Q8WU68 220 aaKnown RBP3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms