RNA–Protein interactions for RNA: ENST00000565821.1

CYCSP39-201, Transcript of cytochrome c, somatic pseudogene 39, humanhuman

BASIC

Gene CYCSP39, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP39-201ENST00000565821 GPSM2P81274 684 aa3.71□□□□□ -1.82
CYCSP39-201ENST00000565821 SRSF3P84103 164 aaKnown RBP3.71□□□□□ -1.82
CYCSP39-201ENST00000565821 SRSF2Q01130 221 aaKnown RBP3.71□□□□□ -1.82
CYCSP39-201ENST00000565821 PFKPQ01813 784 aa3.71□□□□□ -1.82
CYCSP39-201ENST00000565821 ODF1Q14990 250 aa3.71□□□□□ -1.82
CYCSP39-201ENST00000565821 FSCN1Q16658 493 aaKnown RBP3.71□□□□□ -1.82
CYCSP39-201ENST00000565821 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.71□□□□□ -1.82
CYCSP39-201ENST00000565821 GFOD2Q3B7J2 385 aa3.71□□□□□ -1.82
CYCSP39-201ENST00000565821 CD276Q5ZPR3 534 aa3.71□□□□□ -1.82
CYCSP39-201ENST00000565821 PPP4R4Q6NUP7 873 aa3.71□□□□□ -1.82
CYCSP39-201ENST00000565821 ATG4DQ86TL0 474 aaPredicted RBP3.71□□□□□ -1.82
CYCSP39-201ENST00000565821 RTN4RL1Q86UN2 441 aaPredicted RBP3.71□□□□□ -1.82
CYCSP39-201ENST00000565821 ZSWIM9Q86XI8 627 aa3.71□□□□□ -1.82
CYCSP39-201ENST00000565821 TCEAL8Q8IYN2 117 aa3.71□□□□□ -1.82
CYCSP39-201ENST00000565821 MIER2Q8N344 545 aa3.71□□□□□ -1.82
CYCSP39-201ENST00000565821 PPM1NQ8N819 430 aa3.71□□□□□ -1.82
CYCSP39-201ENST00000565821 PI4KAP1Q8N8J0 262 aa3.71□□□□□ -1.82
CYCSP39-201ENST00000565821 TTC8Q8TAM2 541 aa3.71□□□□□ -1.82
CYCSP39-201ENST00000565821 CLIP3Q96DZ5 547 aa3.71□□□□□ -1.82
CYCSP39-201ENST00000565821 MASTLQ96GX5 879 aa3.71□□□□□ -1.82
CYCSP39-201ENST00000565821 RAX2Q96IS3 184 aa3.71□□□□□ -1.82
CYCSP39-201ENST00000565821 TEKT5Q96M29 485 aa3.71□□□□□ -1.82
CYCSP39-201ENST00000565821 UTP14AQ9BVJ6 771 aaKnown RBP3.71□□□□□ -1.82
CYCSP39-201ENST00000565821 CSRNP2Q9H175 543 aa3.71□□□□□ -1.82
CYCSP39-201ENST00000565821 INCENPQ9NQS7 918 aa3.71□□□□□ -1.82
CYCSP39-201ENST00000565821 TRMT112Q9UI30 125 aaKnown RBP3.71□□□□□ -1.82
CYCSP39-201ENST00000565821 RCAN3Q9UKA8 241 aa3.71□□□□□ -1.82
CYCSP39-201ENST00000565821 USP18Q9UMW8 372 aa3.71□□□□□ -1.82
CYCSP39-201ENST00000565821 MAP3K2Q9Y2U5 619 aa3.71□□□□□ -1.82
CYCSP39-201ENST00000565821 PPP2R3BQ9Y5P8 575 aa3.71□□□□□ -1.82
CYCSP39-201ENST00000565821 GPR45Q9Y5Y3 372 aa3.71□□□□□ -1.82
CYCSP39-201ENST00000565821 ARFGEF1Q9Y6D6 1849 aa3.71□□□□□ -1.82
CYCSP39-201ENST00000565821 LAMB2P55268 1798 aa3.71□□□□□ -1.82
CYCSP39-201ENST00000565821 FER1L6Q2WGJ9 1857 aa3.71□□□□□ -1.82
CYCSP39-201ENST00000565821 CCDC88AQ3V6T2 1871 aa3.71□□□□□ -1.82
CYCSP39-201ENST00000565821 RNF123Q5XPI4 1314 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 CENPFP49454 3210 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 DDX60Q8IY21 1712 aaKnown RBP3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 CCDC194A0A1B0GVG4 234 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 GLTPD2A6NH11 291 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 NFIBO00712 420 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 PLIN1O60240 522 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 PCDHGA12O60330 932 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 PRLP01236 227 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 ASGR2P07307 311 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 NCAM1P13591 858 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 VIPR1P32241 457 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 GLRBP48167 497 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 RGS3P49796 1198 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 SLC5A3P53794 718 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 MANFP55145 182 aaKnown RBP3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 LGALS4P56470 323 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 CCT2P78371 535 aaKnown RBP3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 KRT85P78386 507 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 CDK17Q00537 523 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 ALDH6A1Q02252 535 aaKnown RBP3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 CXCL9Q07325 125 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 TARBP2Q15633 366 aaKnown RBP3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 TWISTNBQ3B726 338 aaPredicted RBP3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 MINDY4Q4G0A6 757 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 ARHGAP29Q52LW3 1261 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 TMEM240Q5SV17 173 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 IFIT1BQ5T764 474 aaKnown RBP3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 NXNQ6DKJ4 435 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 CXorf57Q6NSI4 855 aaKnown RBP3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 KIAA1841Q6NSI8 718 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 KIF6Q6ZMV9 814 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 MIB1Q86YT6 1006 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 IRF2BP1Q8IU81 584 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 CMTR2Q8IYT2 770 aaKnown RBP3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 FAM26EQ8N5C1 309 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 MAGEB6Q8N7X4 407 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 PLBD2Q8NHP8 589 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 IGDCC4Q8TDY8 1250 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 AUTS2Q8WXX7 1259 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 JADE3Q92613 823 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 RELTQ969Z4 430 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 FOXRED1Q96CU9 486 aaPredicted RBP3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 SLC2A13Q96QE2 648 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 FOXB1Q99853 325 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 TAOK3Q9H2K8 898 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 GREM2Q9H772 168 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 GALNT8Q9NY28 637 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 BTBD7Q9P203 1132 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 ARHGAP20Q9P2F6 1191 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 RBPJLQ9UBG7 517 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 DPP7Q9UHL4 492 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 PNMA8BQ9ULN7 279 aaPredicted RBP3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 PCDHGA9Q9Y5G4 932 aaKnown RBP3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 PCDHGA8Q9Y5G5 932 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 PCDHGA7Q9Y5G6 932 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 PCDHGA6Q9Y5G7 932 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 PCDHGA3Q9Y5H0 932 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 PCDHGA2Q9Y5H1 932 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 PCDHAC2Q9Y5I4 1007 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 RTL9Q8NET4 1388 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 BRCA2P51587 3418 aa3.7□□□□□ -1.82
CYCSP39-201ENST00000565821 HTTP42858 3142 aa3.69□□□□□ -1.82
CYCSP39-201ENST00000565821 ZNF839A8K0R7 811 aa3.69□□□□□ -1.82
CYCSP39-201ENST00000565821 VSTM5A8MXK1 200 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms