RNA–Protein interactions for RNA: ENST00000565503.5

RPUSD1-206, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 3

Gene RPUSD1, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-206ENST00000565503 FAM187BQ17R55 369 aa23.62■■□□□ 1.37
RPUSD1-206ENST00000565503 CEP57Q86XR8 500 aa23.62■■□□□ 1.37
RPUSD1-206ENST00000565503 HASPINQ8TF76 798 aa23.62■■□□□ 1.37
RPUSD1-206ENST00000565503 GJB4Q9NTQ9 266 aa23.62■■□□□ 1.37
RPUSD1-206ENST00000565503 CASTOR2A6NHX0 329 aa23.61■■□□□ 1.37
RPUSD1-206ENST00000565503 LRRIQ4A6NIV6 560 aa23.61■■□□□ 1.37
RPUSD1-206ENST00000565503 LAMTOR5O43504 91 aa23.61■■□□□ 1.37
RPUSD1-206ENST00000565503 LRRN2O75325 713 aa23.61■■□□□ 1.37
RPUSD1-206ENST00000565503 THP07101 528 aa23.61■■□□□ 1.37
RPUSD1-206ENST00000565503 CALCRLQ16602 461 aa23.61■■□□□ 1.37
RPUSD1-206ENST00000565503 UVSSAQ2YD98 709 aa23.61■■□□□ 1.37
RPUSD1-206ENST00000565503 SLC44A4Q53GD3 710 aa23.61■■□□□ 1.37
RPUSD1-206ENST00000565503 CDCA2Q69YH5 1023 aaPredicted RBP23.61■■□□□ 1.37
RPUSD1-206ENST00000565503 RTL10Q7L3V2 364 aa23.61■■□□□ 1.37
RPUSD1-206ENST00000565503 WASF1Q92558 559 aa23.61■■□□□ 1.37
RPUSD1-206ENST00000565503 FZD8Q9H461 694 aa23.61■■□□□ 1.37
RPUSD1-206ENST00000565503 SPATA6Q9NWH7 488 aaPredicted RBP23.61■■□□□ 1.37
RPUSD1-206ENST00000565503 KCNH3Q9ULD8 1083 aa23.61■■□□□ 1.37
RPUSD1-206ENST00000565503 SPTBN2O15020 2390 aa23.6■■□□□ 1.37
RPUSD1-206ENST00000565503 COL4A3Q01955 1670 aa23.6■■□□□ 1.37
RPUSD1-206ENST00000565503 EPG5Q9HCE0 2579 aa23.6■■□□□ 1.37
RPUSD1-206ENST00000565503 FAM205CA6NFA0 338 aa23.6■■□□□ 1.37
RPUSD1-206ENST00000565503 PTGESO14684 152 aa23.6■■□□□ 1.37
RPUSD1-206ENST00000565503 N4BP3O15049 544 aa23.6■■□□□ 1.37
RPUSD1-206ENST00000565503 CCL16O15467 120 aa23.6■■□□□ 1.37
RPUSD1-206ENST00000565503 KRT2P35908 639 aa23.6■■□□□ 1.37
RPUSD1-206ENST00000565503 ZBTB8OSQ8IWT0 167 aa23.6■■□□□ 1.37
RPUSD1-206ENST00000565503 DCLK2Q8N568 766 aa23.6■■□□□ 1.37
RPUSD1-206ENST00000565503 TNFRSF25Q93038 417 aa23.6■■□□□ 1.37
RPUSD1-206ENST00000565503 TTC12Q9H892 705 aaPredicted RBP23.6■■□□□ 1.37
RPUSD1-206ENST00000565503 BRMS1Q9HCU9 246 aa23.6■■□□□ 1.37
RPUSD1-206ENST00000565503 DAXXQ9UER7 740 aaPredicted RBP23.6■■□□□ 1.37
RPUSD1-206ENST00000565503 POLIQ9UNA4 740 aa23.6■■□□□ 1.37
RPUSD1-206ENST00000565503 PCDHGA2Q9Y5H1 932 aa23.6■■□□□ 1.37
RPUSD1-206ENST00000565503 USO1O60763 962 aaKnown RBP23.59■■□□□ 1.37
RPUSD1-206ENST00000565503 PFKFB2O60825 505 aa23.59■■□□□ 1.37
RPUSD1-206ENST00000565503 NR5A1Q13285 461 aa23.59■■□□□ 1.37
RPUSD1-206ENST00000565503 RAB33AQ14088 237 aa23.59■■□□□ 1.37
RPUSD1-206ENST00000565503 UBXN2BQ14CS0 331 aa23.59■■□□□ 1.37
RPUSD1-206ENST00000565503 NAB2Q15742 525 aa23.59■■□□□ 1.37
RPUSD1-206ENST00000565503 AXDND1Q5T1B0 1012 aaPredicted RBP23.59■■□□□ 1.37
RPUSD1-206ENST00000565503 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.59■■□□□ 1.37
RPUSD1-206ENST00000565503 MCPH1Q8NEM0 835 aa23.59■■□□□ 1.37
RPUSD1-206ENST00000565503 ITFG1Q8TB96 612 aa23.59■■□□□ 1.37
RPUSD1-206ENST00000565503 SLC7A14Q8TBB6 771 aa23.59■■□□□ 1.37
RPUSD1-206ENST00000565503 PIGOQ8TEQ8 1089 aa23.59■■□□□ 1.37
RPUSD1-206ENST00000565503 PDZD7Q9H5P4 517 aa23.59■■□□□ 1.37
RPUSD1-206ENST00000565503 F5P12259 2224 aa23.58■■□□□ 1.37
RPUSD1-206ENST00000565503 FAM170BA6NMN3 283 aa23.58■■□□□ 1.37
RPUSD1-206ENST00000565503 GPR161Q8N6U8 529 aaKnown RBP23.58■■□□□ 1.37
RPUSD1-206ENST00000565503 C2orf40Q9H1Z8 148 aa23.58■■□□□ 1.37
RPUSD1-206ENST00000565503 LTB4R2Q9NPC1 389 aa23.58■■□□□ 1.37
RPUSD1-206ENST00000565503 SNTG2Q9NY99 539 aa23.58■■□□□ 1.37
RPUSD1-206ENST00000565503 ORC3Q9UBD5 711 aaPredicted RBP23.58■■□□□ 1.37
RPUSD1-206ENST00000565503 ADAM12O43184 909 aa23.57■■□□□ 1.36
RPUSD1-206ENST00000565503 NEMFO60524 1076 aa23.57■■□□□ 1.36
RPUSD1-206ENST00000565503 RECQL4O94761 1208 aa23.57■■□□□ 1.36
RPUSD1-206ENST00000565503 FGFR3P22607 806 aa23.57■■□□□ 1.36
RPUSD1-206ENST00000565503 PABPC1LQ4VXU2 614 aaKnown RBP23.57■■□□□ 1.36
RPUSD1-206ENST00000565503 VARS2Q5ST30 1063 aaKnown RBP23.57■■□□□ 1.36
RPUSD1-206ENST00000565503 ZBTB41Q5SVQ8 909 aa23.57■■□□□ 1.36
RPUSD1-206ENST00000565503 NPAS3Q8IXF0 933 aa23.57■■□□□ 1.36
RPUSD1-206ENST00000565503 NELL2Q99435 816 aa23.57■■□□□ 1.36
RPUSD1-206ENST00000565503 KXD1Q9BQD3 176 aa23.57■■□□□ 1.36
RPUSD1-206ENST00000565503 ADPGKQ9BRR6 497 aa23.57■■□□□ 1.36
RPUSD1-206ENST00000565503 GPRC5CQ9NQ84 441 aa23.57■■□□□ 1.36
RPUSD1-206ENST00000565503 MTF2Q9Y483 593 aaPredicted RBP23.57■■□□□ 1.36
RPUSD1-206ENST00000565503 TMEM189-UBE2V1I3L0A0 370 aa23.56■■□□□ 1.36
RPUSD1-206ENST00000565503 OR1D2P34982 312 aa23.56■■□□□ 1.36
RPUSD1-206ENST00000565503 TXKP42681 527 aa23.56■■□□□ 1.36
RPUSD1-206ENST00000565503 RBM25P49756 843 aaKnown RBP23.56■■□□□ 1.36
RPUSD1-206ENST00000565503 CSTF1Q05048 431 aaKnown RBP23.56■■□□□ 1.36
RPUSD1-206ENST00000565503 PRPF4BQ13523 1007 aaKnown RBP23.56■■□□□ 1.36
RPUSD1-206ENST00000565503 RSPO4Q2I0M5 234 aaPredicted RBP23.56■■□□□ 1.36
RPUSD1-206ENST00000565503 ATRIPQ8WXE1 791 aa23.56■■□□□ 1.36
RPUSD1-206ENST00000565503 CLDN23Q96B33 292 aa23.56■■□□□ 1.36
RPUSD1-206ENST00000565503 MTMR9Q96QG7 549 aa23.56■■□□□ 1.36
RPUSD1-206ENST00000565503 NCDNQ9UBB6 729 aa23.56■■□□□ 1.36
RPUSD1-206ENST00000565503 DNMT3BQ9UBC3 853 aaKnown RBP23.56■■□□□ 1.36
RPUSD1-206ENST00000565503 MTRRQ9UBK8 725 aa23.56■■□□□ 1.36
RPUSD1-206ENST00000565503 ACACBO00763 2458 aa23.55■■□□□ 1.36
RPUSD1-206ENST00000565503 TTLL13PA6NNM8 815 aa23.55■■□□□ 1.36
RPUSD1-206ENST00000565503 NCAM2O15394 837 aa23.55■■□□□ 1.36
RPUSD1-206ENST00000565503 ECI2O75521 394 aa23.55■■□□□ 1.36
RPUSD1-206ENST00000565503 CTDNEP1O95476 244 aa23.55■■□□□ 1.36
RPUSD1-206ENST00000565503 SDHBP21912 280 aa23.55■■□□□ 1.36
RPUSD1-206ENST00000565503 RPS9P46781 194 aaKnown RBP23.55■■□□□ 1.36
RPUSD1-206ENST00000565503 MAPK6Q16659 721 aa23.55■■□□□ 1.36
RPUSD1-206ENST00000565503 TMEM132AQ24JP5 1023 aa23.55■■□□□ 1.36
RPUSD1-206ENST00000565503 MAEAQ7L5Y9 396 aa23.55■■□□□ 1.36
RPUSD1-206ENST00000565503 ZBTB44Q8NCP5 570 aa23.55■■□□□ 1.36
RPUSD1-206ENST00000565503 HCFC1R1Q9NWW0 138 aa23.55■■□□□ 1.36
RPUSD1-206ENST00000565503 ZSCAN32Q9NX65 697 aa23.55■■□□□ 1.36
RPUSD1-206ENST00000565503 GDE1Q9NZC3 331 aa23.55■■□□□ 1.36
RPUSD1-206ENST00000565503 TPCN1Q9ULQ1 816 aa23.55■■□□□ 1.36
RPUSD1-206ENST00000565503 ACKR2O00590 384 aa23.54■■□□□ 1.36
RPUSD1-206ENST00000565503 PRKCBP05771 671 aa23.54■■□□□ 1.36
RPUSD1-206ENST00000565503 SPATA31C1P0DKV0 1188 aa23.54■■□□□ 1.36
RPUSD1-206ENST00000565503 ATP2B1P20020 1258 aa23.54■■□□□ 1.36
RPUSD1-206ENST00000565503 NELL1Q92832 810 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms