RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 PALB2Q86YC2 1186 aa14.94□□□□□ -0.02
VPS9D1-204ENST00000565023 RNF135Q8IUD6 432 aa14.94□□□□□ -0.02
VPS9D1-204ENST00000565023 MYCT1Q8N699 235 aa14.94□□□□□ -0.02
VPS9D1-204ENST00000565023 RIN2Q8WYP3 895 aaPredicted RBP14.94□□□□□ -0.02
VPS9D1-204ENST00000565023 SUSD6Q92537 303 aa14.94□□□□□ -0.02
VPS9D1-204ENST00000565023 LARP4BQ92615 738 aaKnown RBP14.94□□□□□ -0.02
VPS9D1-204ENST00000565023 FBXL18Q96ME1 805 aa14.94□□□□□ -0.02
VPS9D1-204ENST00000565023 C17orf75Q9HAS0 396 aa14.94□□□□□ -0.02
VPS9D1-204ENST00000565023 GOLGA2P5Q9HBQ8 144 aa14.94□□□□□ -0.02
VPS9D1-204ENST00000565023 LARSQ9P2J5 1176 aaKnown RBP14.94□□□□□ -0.02
VPS9D1-204ENST00000565023 FBXO2Q9UK22 296 aaPredicted RBP14.94□□□□□ -0.02
VPS9D1-204ENST00000565023 C2orf16Q68DN1 1984 aa14.94□□□□□ -0.02
VPS9D1-204ENST00000565023 K7ENM7 598 aa14.93□□□□□ -0.02
VPS9D1-204ENST00000565023 TEX28O15482 410 aa14.93□□□□□ -0.02
VPS9D1-204ENST00000565023 LILRB3O75022 631 aa14.93□□□□□ -0.02
VPS9D1-204ENST00000565023 TBCAO75347 108 aaKnown RBP14.93□□□□□ -0.02
VPS9D1-204ENST00000565023 ALADP13716 330 aa14.93□□□□□ -0.02
VPS9D1-204ENST00000565023 GRM5P41594 1212 aa14.93□□□□□ -0.02
VPS9D1-204ENST00000565023 NASPP49321 788 aaPredicted RBP14.93□□□□□ -0.02
VPS9D1-204ENST00000565023 CLCN4P51793 760 aa14.93□□□□□ -0.02
VPS9D1-204ENST00000565023 SLC39A14Q15043 492 aa14.93□□□□□ -0.02
VPS9D1-204ENST00000565023 USP41Q3LFD5 358 aa14.93□□□□□ -0.02
VPS9D1-204ENST00000565023 FAM171A1Q5VUB5 890 aa14.93□□□□□ -0.02
VPS9D1-204ENST00000565023 PRSS55Q6UWB4 352 aaPredicted RBP14.93□□□□□ -0.02
VPS9D1-204ENST00000565023 MPZL3Q6UWV2 235 aa14.93□□□□□ -0.02
VPS9D1-204ENST00000565023 HAUS6Q7Z4H7 955 aa14.93□□□□□ -0.02
VPS9D1-204ENST00000565023 PPFIBP1Q86W92 1011 aa14.93□□□□□ -0.02
VPS9D1-204ENST00000565023 KCTD17Q8N5Z5 321 aa14.93□□□□□ -0.02
VPS9D1-204ENST00000565023 TMEM161BQ8NDZ6 487 aa14.93□□□□□ -0.02
VPS9D1-204ENST00000565023 SPIRE2Q8WWL2 714 aa14.93□□□□□ -0.02
VPS9D1-204ENST00000565023 SNX27Q96L92 541 aa14.93□□□□□ -0.02
VPS9D1-204ENST00000565023 ZNF396Q96N95 335 aaPredicted RBP14.93□□□□□ -0.02
VPS9D1-204ENST00000565023 PANK2Q9BZ23 570 aa14.93□□□□□ -0.02
VPS9D1-204ENST00000565023 ADAM7Q9H2U9 754 aa14.93□□□□□ -0.02
VPS9D1-204ENST00000565023 POMKQ9H5K3 350 aa14.93□□□□□ -0.02
VPS9D1-204ENST00000565023 DZANK1Q9NVP4 752 aa14.93□□□□□ -0.02
VPS9D1-204ENST00000565023 STK39Q9UEW8 545 aa14.93□□□□□ -0.02
VPS9D1-204ENST00000565023 CCDC39Q9UFE4 941 aa14.93□□□□□ -0.02
VPS9D1-204ENST00000565023 SSX2IPQ9Y2D8 614 aa14.93□□□□□ -0.02
VPS9D1-204ENST00000565023 ZDHHC9Q9Y397 364 aa14.93□□□□□ -0.02
VPS9D1-204ENST00000565023 HCN4Q9Y3Q4 1203 aa14.93□□□□□ -0.02
VPS9D1-204ENST00000565023 VWA8A3KMH1 1905 aa14.93□□□□□ -0.02
VPS9D1-204ENST00000565023 ZMYM2Q9UBW7 1377 aa14.93□□□□□ -0.02
VPS9D1-204ENST00000565023 MTCL1Q9Y4B5 1905 aaKnown RBP14.92□□□□□ -0.02
VPS9D1-204ENST00000565023 SLC26A4O43511 780 aa14.92□□□□□ -0.02
VPS9D1-204ENST00000565023 ADH1AP07327 375 aa14.92□□□□□ -0.02
VPS9D1-204ENST00000565023 MAPTP10636 758 aaKnown RBP14.92□□□□□ -0.02
VPS9D1-204ENST00000565023 IGFBP6P24592 240 aaPredicted RBP14.92□□□□□ -0.02
VPS9D1-204ENST00000565023 TXLNAP40222 546 aa14.92□□□□□ -0.02
VPS9D1-204ENST00000565023 DSG1Q02413 1049 aa14.92□□□□□ -0.02
VPS9D1-204ENST00000565023 STK38Q15208 465 aa14.92□□□□□ -0.02
VPS9D1-204ENST00000565023 NAB2Q15742 525 aa14.92□□□□□ -0.02
VPS9D1-204ENST00000565023 KIAA0319Q5VV43 1072 aa14.92□□□□□ -0.02
VPS9D1-204ENST00000565023 DYMQ7RTS9 669 aa14.92□□□□□ -0.02
VPS9D1-204ENST00000565023 RNF168Q8IYW5 571 aaPredicted RBP14.92□□□□□ -0.02
VPS9D1-204ENST00000565023 RIPOR3Q96MK2 946 aa14.92□□□□□ -0.02
VPS9D1-204ENST00000565023 ACAP3Q96P50 834 aa14.92□□□□□ -0.02
VPS9D1-204ENST00000565023 CCSER1Q9C0I3 900 aa14.92□□□□□ -0.02
VPS9D1-204ENST00000565023 PTPRHQ9HD43 1115 aa14.92□□□□□ -0.02
VPS9D1-204ENST00000565023 C11orf16Q9NQ32 467 aa14.92□□□□□ -0.02
VPS9D1-204ENST00000565023 MAN1C1Q9NR34 630 aa14.92□□□□□ -0.02
VPS9D1-204ENST00000565023 KCND2Q9NZV8 630 aa14.92□□□□□ -0.02
VPS9D1-204ENST00000565023 TFIP11Q9UBB9 837 aaKnown RBP14.92□□□□□ -0.02
VPS9D1-204ENST00000565023 ODF2LQ9ULJ1 636 aa14.92□□□□□ -0.02
VPS9D1-204ENST00000565023 SRPRBQ9Y5M8 271 aaKnown RBP14.92□□□□□ -0.02
VPS9D1-204ENST00000565023 PDCD11Q14690 1871 aaKnown RBP14.92□□□□□ -0.02
VPS9D1-204ENST00000565023 SF3B1O75533 1304 aaKnown RBP eCLIP14.92□□□□□ -0.02
VPS9D1-204ENST00000565023 MYO10Q9HD67 2058 aa14.91□□□□□ -0.02
VPS9D1-204ENST00000565023 LOC730098B7Z3J9 87 aa14.91□□□□□ -0.02
VPS9D1-204ENST00000565023 I3L4J1 428 aa14.91□□□□□ -0.02
VPS9D1-204ENST00000565023 GLUD1P00367 558 aa14.91□□□□□ -0.02
VPS9D1-204ENST00000565023 MCF2P10911 925 aa14.91□□□□□ -0.02
VPS9D1-204ENST00000565023 NMT1P30419 496 aaKnown RBP14.91□□□□□ -0.02
VPS9D1-204ENST00000565023 LIG4P49917 911 aa14.91□□□□□ -0.02
VPS9D1-204ENST00000565023 CLCNKBP51801 687 aa14.91□□□□□ -0.02
VPS9D1-204ENST00000565023 NCKAP1LP55160 1127 aa14.91□□□□□ -0.02
VPS9D1-204ENST00000565023 ITIH3Q06033 890 aa14.91□□□□□ -0.02
VPS9D1-204ENST00000565023 NOLC1Q14978 699 aaKnown RBP eCLIP14.91□□□□□ -0.02
VPS9D1-204ENST00000565023 RTP2Q5QGT7 225 aa14.91□□□□□ -0.02
VPS9D1-204ENST00000565023 ATAT1Q5SQI0 421 aa14.91□□□□□ -0.02
VPS9D1-204ENST00000565023 RRAGBQ5VZM2 374 aa14.91□□□□□ -0.02
VPS9D1-204ENST00000565023 ATL3Q6DD88 541 aa14.91□□□□□ -0.02
VPS9D1-204ENST00000565023 LINC00301Q8NCQ3 95 aa14.91□□□□□ -0.02
VPS9D1-204ENST00000565023 PPP1R10Q96QC0 940 aaKnown RBP14.91□□□□□ -0.02
VPS9D1-204ENST00000565023 NTPCRQ9BSD7 190 aaKnown RBP14.91□□□□□ -0.02
VPS9D1-204ENST00000565023 SFXN1Q9H9B4 322 aa14.91□□□□□ -0.02
VPS9D1-204ENST00000565023 PARVGQ9HBI0 331 aa14.91□□□□□ -0.02
VPS9D1-204ENST00000565023 TOPORSQ9NS56 1045 aaPredicted RBP14.91□□□□□ -0.02
VPS9D1-204ENST00000565023 CHST7Q9NS84 486 aa14.91□□□□□ -0.02
VPS9D1-204ENST00000565023 KCNG1Q9UIX4 513 aa14.91□□□□□ -0.02
VPS9D1-204ENST00000565023 C5orf42Q9H799 3197 aa14.91□□□□□ -0.02
VPS9D1-204ENST00000565023 SMIM28A0A1B0GU29 152 aa14.9□□□□□ -0.02
VPS9D1-204ENST00000565023 TULP1O00294 542 aaPredicted RBP14.9□□□□□ -0.02
VPS9D1-204ENST00000565023 ABLIM1O14639 778 aa14.9□□□□□ -0.02
VPS9D1-204ENST00000565023 TRAK2O60296 914 aa14.9□□□□□ -0.02
VPS9D1-204ENST00000565023 TOM1L1O75674 476 aa14.9□□□□□ -0.02
VPS9D1-204ENST00000565023 B3GAT3O94766 335 aa14.9□□□□□ -0.02
VPS9D1-204ENST00000565023 YEATS4O95619 227 aa14.9□□□□□ -0.02
VPS9D1-204ENST00000565023 EFEMP2O95967 443 aa14.9□□□□□ -0.02
VPS9D1-204ENST00000565023 PROZP22891 400 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms