RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 PCDHA11Q9Y5I1 949 aa12.07□□□□□ -0.48
SF3B3-205ENST00000564899 SLC4A7Q9Y6M7 1214 aa12.07□□□□□ -0.48
SF3B3-205ENST00000564899 USP34Q70CQ2 3546 aa12.06□□□□□ -0.48
SF3B3-205ENST00000564899 A0A0B4J269 797 aa12.06□□□□□ -0.48
SF3B3-205ENST00000564899 LRRC10BA6NIK2 292 aa12.06□□□□□ -0.48
SF3B3-205ENST00000564899 LGALS16A8MUM7 142 aa12.06□□□□□ -0.48
SF3B3-205ENST00000564899 ABLIM1O14639 778 aa12.06□□□□□ -0.48
SF3B3-205ENST00000564899 MAPK13O15264 365 aa12.06□□□□□ -0.48
SF3B3-205ENST00000564899 LDHAP00338 332 aaKnown RBP12.06□□□□□ -0.48
SF3B3-205ENST00000564899 CHRNA1P02708 482 aa12.06□□□□□ -0.48
SF3B3-205ENST00000564899 KRT13P13646 458 aa12.06□□□□□ -0.48
SF3B3-205ENST00000564899 ATP2A2P16615 1042 aaKnown RBP12.06□□□□□ -0.48
SF3B3-205ENST00000564899 PROZP22891 400 aa12.06□□□□□ -0.48
SF3B3-205ENST00000564899 MCL1Q07820 350 aa12.06□□□□□ -0.48
SF3B3-205ENST00000564899 SNRNP35Q16560 246 aaKnown RBP12.06□□□□□ -0.48
SF3B3-205ENST00000564899 VWA3BQ502W6 1294 aa12.06□□□□□ -0.48
SF3B3-205ENST00000564899 DCAF17Q5H9S7 520 aaPredicted RBP12.06□□□□□ -0.48
SF3B3-205ENST00000564899 EEF1DP3Q658K8 133 aa12.06□□□□□ -0.48
SF3B3-205ENST00000564899 INTS8Q75QN2 995 aaKnown RBP12.06□□□□□ -0.48
SF3B3-205ENST00000564899 TMCO2Q7Z6W1 182 aaPredicted RBP12.06□□□□□ -0.48
SF3B3-205ENST00000564899 DEFB128Q7Z7B8 93 aa12.06□□□□□ -0.48
SF3B3-205ENST00000564899 CDR2LQ86X02 465 aaPredicted RBP12.06□□□□□ -0.48
SF3B3-205ENST00000564899 CBWD2Q8IUF1 395 aa12.06□□□□□ -0.48
SF3B3-205ENST00000564899 TRIM59Q8IWR1 403 aa12.06□□□□□ -0.48
SF3B3-205ENST00000564899 CCDC155Q8N6L0 562 aa12.06□□□□□ -0.48
SF3B3-205ENST00000564899 RDH13Q8NBN7 331 aa12.06□□□□□ -0.48
SF3B3-205ENST00000564899 MRFAP1L1Q96HT8 127 aa12.06□□□□□ -0.48
SF3B3-205ENST00000564899 FBXL18Q96ME1 805 aa12.06□□□□□ -0.48
SF3B3-205ENST00000564899 FAM213AQ9BRX8 229 aa12.06□□□□□ -0.48
SF3B3-205ENST00000564899 HAPLN2Q9GZV7 340 aa12.06□□□□□ -0.48
SF3B3-205ENST00000564899 CDT1Q9H211 546 aa12.06□□□□□ -0.48
SF3B3-205ENST00000564899 KIAA1586Q9HCI6 787 aa12.06□□□□□ -0.48
SF3B3-205ENST00000564899 PTPRHQ9HD43 1115 aa12.06□□□□□ -0.48
SF3B3-205ENST00000564899 RTN4Q9NQC3 1192 aaKnown RBP12.06□□□□□ -0.48
SF3B3-205ENST00000564899 NOC2LQ9Y3T9 749 aaKnown RBP12.06□□□□□ -0.48
SF3B3-205ENST00000564899 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.06□□□□□ -0.48
SF3B3-205ENST00000564899 ZNF233A6NK53 670 aa12.05□□□□□ -0.48
SF3B3-205ENST00000564899 LPXNO60711 386 aa12.05□□□□□ -0.48
SF3B3-205ENST00000564899 RPS6KA5O75582 802 aa12.05□□□□□ -0.48
SF3B3-205ENST00000564899 ADRB2P07550 413 aa12.05□□□□□ -0.48
SF3B3-205ENST00000564899 MCF2P10911 925 aa12.05□□□□□ -0.48
SF3B3-205ENST00000564899 CKBP12277 381 aa12.05□□□□□ -0.48
SF3B3-205ENST00000564899 AXLP30530 894 aa12.05□□□□□ -0.48
SF3B3-205ENST00000564899 PPP2R3AQ06190 1150 aa12.05□□□□□ -0.48
SF3B3-205ENST00000564899 BFSP1Q12934 665 aa12.05□□□□□ -0.48
SF3B3-205ENST00000564899 DCAF4L1Q3SXM0 396 aa12.05□□□□□ -0.48
SF3B3-205ENST00000564899 FAM26DQ5JW98 314 aa12.05□□□□□ -0.48
SF3B3-205ENST00000564899 MIIPQ5JXC2 388 aa12.05□□□□□ -0.48
SF3B3-205ENST00000564899 TMEM31Q5JXX7 168 aa12.05□□□□□ -0.48
SF3B3-205ENST00000564899 ZNF618Q5T7W0 954 aa12.05□□□□□ -0.48
SF3B3-205ENST00000564899 TCERG1LQ5VWI1 586 aa12.05□□□□□ -0.48
SF3B3-205ENST00000564899 NOTUMQ6P988 496 aa12.05□□□□□ -0.48
SF3B3-205ENST00000564899 APBB1IPQ7Z5R6 666 aaPredicted RBP12.05□□□□□ -0.48
SF3B3-205ENST00000564899 FAM228AQ86W67 206 aa12.05□□□□□ -0.48
SF3B3-205ENST00000564899 CAGE1Q8TC20 777 aa12.05□□□□□ -0.48
SF3B3-205ENST00000564899 BORCS6Q96GS4 357 aa12.05□□□□□ -0.48
SF3B3-205ENST00000564899 ADPGKQ9BRR6 497 aa12.05□□□□□ -0.48
SF3B3-205ENST00000564899 AGPAT5Q9NUQ2 364 aa12.05□□□□□ -0.48
SF3B3-205ENST00000564899 INTS13Q9NVM9 706 aa12.05□□□□□ -0.48
SF3B3-205ENST00000564899 PIN4Q9Y237 131 aaKnown RBP12.05□□□□□ -0.48
SF3B3-205ENST00000564899 A0A1B0GUA9 196 aa12.04□□□□□ -0.48
SF3B3-205ENST00000564899 LCHNA4D1U4 455 aa12.04□□□□□ -0.48
SF3B3-205ENST00000564899 TULP1O00294 542 aaPredicted RBP12.04□□□□□ -0.48
SF3B3-205ENST00000564899 OGTO15294 1046 aa12.04□□□□□ -0.48
SF3B3-205ENST00000564899 TEX33O43247 280 aa12.04□□□□□ -0.48
SF3B3-205ENST00000564899 GHRP10912 638 aa12.04□□□□□ -0.48
SF3B3-205ENST00000564899 CDC25BP30305 580 aa12.04□□□□□ -0.48
SF3B3-205ENST00000564899 HOXA11P31270 313 aaPredicted RBP12.04□□□□□ -0.48
SF3B3-205ENST00000564899 ACOT2P49753 483 aa12.04□□□□□ -0.48
SF3B3-205ENST00000564899 VAMP7P51809 220 aa12.04□□□□□ -0.48
SF3B3-205ENST00000564899 TAP1Q03518 808 aa12.04□□□□□ -0.48
SF3B3-205ENST00000564899 UBXN1Q04323 297 aa12.04□□□□□ -0.48
SF3B3-205ENST00000564899 RBL2Q08999 1139 aa12.04□□□□□ -0.48
SF3B3-205ENST00000564899 CCDC173Q0VFZ6 552 aa12.04□□□□□ -0.48
SF3B3-205ENST00000564899 BFSP2Q13515 415 aa12.04□□□□□ -0.48
SF3B3-205ENST00000564899 NR1I3Q14994 352 aa12.04□□□□□ -0.48
SF3B3-205ENST00000564899 FBXO47Q5MNV8 452 aa12.04□□□□□ -0.48
SF3B3-205ENST00000564899 ZBTB41Q5SVQ8 909 aa12.04□□□□□ -0.48
SF3B3-205ENST00000564899 FKBP15Q5T1M5 1219 aa12.04□□□□□ -0.48
SF3B3-205ENST00000564899 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.04□□□□□ -0.48
SF3B3-205ENST00000564899 ALYREFQ86V81 257 aaKnown RBP12.04□□□□□ -0.48
SF3B3-205ENST00000564899 ARNTL2Q8WYA1 636 aa12.04□□□□□ -0.48
SF3B3-205ENST00000564899 SLC35C1Q96A29 364 aa12.04□□□□□ -0.48
SF3B3-205ENST00000564899 CCDC51Q96ER9 411 aa12.04□□□□□ -0.48
SF3B3-205ENST00000564899 NDST4Q9H3R1 872 aa12.04□□□□□ -0.48
SF3B3-205ENST00000564899 RBAKQ9NYW8 714 aaPredicted RBP12.04□□□□□ -0.48
SF3B3-205ENST00000564899 HCN4Q9Y3Q4 1203 aa12.04□□□□□ -0.48
SF3B3-205ENST00000564899 TRIP12Q14669 1992 aaPredicted RBP12.04□□□□□ -0.48
SF3B3-205ENST00000564899 GPR182O15218 404 aa12.03□□□□□ -0.48
SF3B3-205ENST00000564899 FAM189A1O60320 539 aa12.03□□□□□ -0.48
SF3B3-205ENST00000564899 NPTXRO95502 500 aa12.03□□□□□ -0.48
SF3B3-205ENST00000564899 AFPP02771 609 aaKnown RBP12.03□□□□□ -0.48
SF3B3-205ENST00000564899 TRIM49P0CI25 452 aa12.03□□□□□ -0.48
SF3B3-205ENST00000564899 TRIM49CP0CI26 452 aa12.03□□□□□ -0.48
SF3B3-205ENST00000564899 SELPP16109 830 aa12.03□□□□□ -0.48
SF3B3-205ENST00000564899 POU3F3P20264 500 aaPredicted RBP12.03□□□□□ -0.48
SF3B3-205ENST00000564899 CYP24A1Q07973 514 aa12.03□□□□□ -0.48
SF3B3-205ENST00000564899 KCNH2Q12809 1159 aa12.03□□□□□ -0.48
SF3B3-205ENST00000564899 NFX1Q12986 1120 aaKnown RBP12.03□□□□□ -0.48
SF3B3-205ENST00000564899 PAK2Q13177 524 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms