RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 TRMT1LQ7Z2T5 733 aaKnown RBP17.38■□□□□ 0.37
LINC00554-201ENST00000564841 CEP63Q96MT8 703 aa17.38■□□□□ 0.37
LINC00554-201ENST00000564841 FAM210AQ96ND0 272 aa17.38■□□□□ 0.37
LINC00554-201ENST00000564841 CARD9Q9H257 536 aa17.38■□□□□ 0.37
LINC00554-201ENST00000564841 TMEM165Q9HC07 324 aa17.38■□□□□ 0.37
LINC00554-201ENST00000564841 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.38■□□□□ 0.37
LINC00554-201ENST00000564841 DDX25Q9UHL0 483 aaKnown RBP17.38■□□□□ 0.37
LINC00554-201ENST00000564841 TTC7AQ9ULT0 858 aaPredicted RBP17.38■□□□□ 0.37
LINC00554-201ENST00000564841 PCDHA2Q9Y5H9 948 aa17.38■□□□□ 0.37
LINC00554-201ENST00000564841 POLGP54098 1239 aaPredicted RBP17.37■□□□□ 0.37
LINC00554-201ENST00000564841 SETDB1Q15047 1291 aa17.37■□□□□ 0.37
LINC00554-201ENST00000564841 KBTBD2Q8IY47 623 aa17.37■□□□□ 0.37
LINC00554-201ENST00000564841 CTNNBL1Q8WYA6 563 aaPredicted RBP17.37■□□□□ 0.37
LINC00554-201ENST00000564841 NAP1L3Q99457 506 aaPredicted RBP17.37■□□□□ 0.37
LINC00554-201ENST00000564841 TMEM109Q9BVC6 243 aa17.37■□□□□ 0.37
LINC00554-201ENST00000564841 VCXQ9H320 206 aa17.37■□□□□ 0.37
LINC00554-201ENST00000564841 PCDHB13Q9Y5F0 798 aa17.37■□□□□ 0.37
LINC00554-201ENST00000564841 POTEFA5A3E0 1075 aa17.37■□□□□ 0.37
LINC00554-201ENST00000564841 ATMINO43313 823 aaPredicted RBP17.37■□□□□ 0.37
LINC00554-201ENST00000564841 GH2P01242 217 aa17.37■□□□□ 0.37
LINC00554-201ENST00000564841 POTEIP0CG38 1075 aa17.37■□□□□ 0.37
LINC00554-201ENST00000564841 PYGMP11217 842 aa17.37■□□□□ 0.37
LINC00554-201ENST00000564841 BAG6P46379 1132 aa17.37■□□□□ 0.37
LINC00554-201ENST00000564841 CYP4A11Q02928 519 aa17.37■□□□□ 0.37
LINC00554-201ENST00000564841 TAF1BQ53T94 588 aaPredicted RBP17.37■□□□□ 0.37
LINC00554-201ENST00000564841 POTEGQ6S5H5 508 aa17.37■□□□□ 0.37
LINC00554-201ENST00000564841 POTEEQ6S8J3 1075 aa17.37■□□□□ 0.37
LINC00554-201ENST00000564841 ENDOVQ8N8Q3 282 aaKnown RBP17.37■□□□□ 0.37
LINC00554-201ENST00000564841 C1orf54Q8WWF1 131 aa17.37■□□□□ 0.37
LINC00554-201ENST00000564841 RFFLQ8WZ73 363 aa17.37■□□□□ 0.37
LINC00554-201ENST00000564841 NDNQ99608 321 aa17.37■□□□□ 0.37
LINC00554-201ENST00000564841 SPZ1Q9BXG8 430 aa17.37■□□□□ 0.37
LINC00554-201ENST00000564841 CDK5RAP2Q96SN8 1893 aa17.37■□□□□ 0.37
LINC00554-201ENST00000564841 NEK3P51956 506 aa17.37■□□□□ 0.37
LINC00554-201ENST00000564841 PSMC6P62333 389 aa17.37■□□□□ 0.37
LINC00554-201ENST00000564841 JAG1P78504 1218 aa17.37■□□□□ 0.37
LINC00554-201ENST00000564841 AGGF1Q8N302 714 aaeCLIP17.37■□□□□ 0.37
LINC00554-201ENST00000564841 HAS1Q92839 578 aa17.37■□□□□ 0.37
LINC00554-201ENST00000564841 JMJD4Q9H9V9 463 aa17.37■□□□□ 0.37
LINC00554-201ENST00000564841 PREBQ9HCU5 417 aa17.37■□□□□ 0.37
LINC00554-201ENST00000564841 PI4KBQ9UBF8 816 aa17.37■□□□□ 0.37
LINC00554-201ENST00000564841 BZW2Q9Y6E2 419 aaKnown RBP17.37■□□□□ 0.37
LINC00554-201ENST00000564841 PCNTO95613 3336 aa17.36■□□□□ 0.37
LINC00554-201ENST00000564841 PRKCIP41743 596 aa17.36■□□□□ 0.37
LINC00554-201ENST00000564841 EPHA7Q15375 998 aa17.36■□□□□ 0.37
LINC00554-201ENST00000564841 TMEM63BQ5T3F8 832 aa17.36■□□□□ 0.37
LINC00554-201ENST00000564841 VPS36Q86VN1 386 aa17.36■□□□□ 0.37
LINC00554-201ENST00000564841 GPBP1Q86WP2 473 aa17.36■□□□□ 0.37
LINC00554-201ENST00000564841 ART4Q93070 314 aa17.36■□□□□ 0.37
LINC00554-201ENST00000564841 MAGEB18Q96M61 343 aa17.36■□□□□ 0.37
LINC00554-201ENST00000564841 GRID1Q9ULK0 1009 aa17.36■□□□□ 0.37
LINC00554-201ENST00000564841 PHTF1Q9UMS5 762 aa17.36■□□□□ 0.37
LINC00554-201ENST00000564841 NAALADL1Q9UQQ1 740 aa17.36■□□□□ 0.37
LINC00554-201ENST00000564841 LRRN2O75325 713 aa17.36■□□□□ 0.37
LINC00554-201ENST00000564841 SKIV2L2P42285 1042 aaKnown RBP17.36■□□□□ 0.37
LINC00554-201ENST00000564841 DRG2P55039 364 aaKnown RBP17.36■□□□□ 0.37
LINC00554-201ENST00000564841 MESDQ14696 234 aa17.36■□□□□ 0.37
LINC00554-201ENST00000564841 KPNB1Q14974 876 aaKnown RBP17.36■□□□□ 0.37
LINC00554-201ENST00000564841 ARHGAP44Q17R89 818 aa17.36■□□□□ 0.37
LINC00554-201ENST00000564841 HP1BP3Q5SSJ5 553 aaPredicted RBP17.36■□□□□ 0.37
LINC00554-201ENST00000564841 RASIP1Q5U651 963 aa17.36■□□□□ 0.37
LINC00554-201ENST00000564841 ZNF746Q6NUN9 644 aaPredicted RBP17.36■□□□□ 0.37
LINC00554-201ENST00000564841 IRGCQ6NXR0 463 aa17.36■□□□□ 0.37
LINC00554-201ENST00000564841 C7orf43Q8WVR3 580 aa17.36■□□□□ 0.37
LINC00554-201ENST00000564841 FAM118BQ9BPY3 351 aa17.36■□□□□ 0.37
LINC00554-201ENST00000564841 PCDHA12Q9UN75 941 aa17.36■□□□□ 0.37
LINC00554-201ENST00000564841 PITPNM2Q9BZ72 1349 aa17.35■□□□□ 0.37
LINC00554-201ENST00000564841 CAPN9O14815 690 aa17.35■□□□□ 0.37
LINC00554-201ENST00000564841 TBX10O75333 385 aa17.35■□□□□ 0.37
LINC00554-201ENST00000564841 XRCC5P13010 732 aaKnown RBP17.35■□□□□ 0.37
LINC00554-201ENST00000564841 HOXD13P35453 343 aa17.35■□□□□ 0.37
LINC00554-201ENST00000564841 CCNFP41002 786 aa17.35■□□□□ 0.37
LINC00554-201ENST00000564841 MCL1Q07820 350 aa17.35■□□□□ 0.37
LINC00554-201ENST00000564841 ZNF543Q08ER8 600 aa17.35■□□□□ 0.37
LINC00554-201ENST00000564841 PABPC4Q13310 644 aaKnown RBP eCLIP17.35■□□□□ 0.37
LINC00554-201ENST00000564841 ACSBG2Q5FVE4 666 aa17.35■□□□□ 0.37
LINC00554-201ENST00000564841 ATL2Q8NHH9 583 aa17.35■□□□□ 0.37
LINC00554-201ENST00000564841 C9orf72Q96LT7 481 aa17.35■□□□□ 0.37
LINC00554-201ENST00000564841 LZTS2Q9BRK4 669 aa17.35■□□□□ 0.37
LINC00554-201ENST00000564841 LNPEPQ9UIQ6 1025 aa17.35■□□□□ 0.37
LINC00554-201ENST00000564841 USP20Q9Y2K6 914 aa17.35■□□□□ 0.37
LINC00554-201ENST00000564841 WASF2Q9Y6W5 498 aa17.35■□□□□ 0.37
LINC00554-201ENST00000564841 A0A0A6YYK5 440 aaPredicted RBP17.35■□□□□ 0.37
LINC00554-201ENST00000564841 JAM2P57087 298 aa17.35■□□□□ 0.37
LINC00554-201ENST00000564841 GIT2Q14161 759 aa17.35■□□□□ 0.37
LINC00554-201ENST00000564841 SLFN13Q68D06 897 aa17.35■□□□□ 0.37
LINC00554-201ENST00000564841 SLC30A5Q8TAD4 765 aa17.35■□□□□ 0.37
LINC00554-201ENST00000564841 ATG4AQ8WYN0 398 aa17.35■□□□□ 0.37
LINC00554-201ENST00000564841 ANKRD27Q96NW4 1050 aa17.35■□□□□ 0.37
LINC00554-201ENST00000564841 NKIRAS1Q9NYS0 192 aa17.35■□□□□ 0.37
LINC00554-201ENST00000564841 FAM163BP0C2L3 166 aa17.34■□□□□ 0.37
LINC00554-201ENST00000564841 DLATP10515 647 aaKnown RBP17.34■□□□□ 0.37
LINC00554-201ENST00000564841 OGFOD1Q8N543 542 aa17.34■□□□□ 0.37
LINC00554-201ENST00000564841 WDR60Q8WVS4 1066 aa17.34■□□□□ 0.37
LINC00554-201ENST00000564841 CHCHD3Q9NX63 227 aaKnown RBP17.34■□□□□ 0.37
LINC00554-201ENST00000564841 DCTN4Q9UJW0 460 aa17.34■□□□□ 0.37
LINC00554-201ENST00000564841 USH1CQ9Y6N9 552 aa17.34■□□□□ 0.37
LINC00554-201ENST00000564841 TJP3O95049 919 aa17.34■□□□□ 0.37
LINC00554-201ENST00000564841 GNA14O95837 355 aa17.34■□□□□ 0.37
LINC00554-201ENST00000564841 FGFR1P11362 822 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms