RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 C6orf222P0C671 652 aaPredicted RBP16.79■□□□□ 0.28
COMMD4-210ENST00000564587 HARSP12081 509 aaKnown RBP16.79■□□□□ 0.28
COMMD4-210ENST00000564587 AXLP30530 894 aa16.79■□□□□ 0.28
COMMD4-210ENST00000564587 PTK2Q05397 1052 aa16.79■□□□□ 0.28
COMMD4-210ENST00000564587 BIRC3Q13489 604 aa16.79■□□□□ 0.28
COMMD4-210ENST00000564587 ZNF569Q5MCW4 686 aa16.79■□□□□ 0.28
COMMD4-210ENST00000564587 TAF2Q6P1X5 1199 aa16.79■□□□□ 0.28
COMMD4-210ENST00000564587 GJB7Q6PEY0 223 aa16.79■□□□□ 0.28
COMMD4-210ENST00000564587 RNF10Q8N5U6 811 aaKnown RBP16.79■□□□□ 0.28
COMMD4-210ENST00000564587 C7orf31Q8N865 590 aa16.79■□□□□ 0.28
COMMD4-210ENST00000564587 TAS1R2Q8TE23 839 aa16.79■□□□□ 0.28
COMMD4-210ENST00000564587 DHX38Q92620 1227 aaKnown RBP16.79■□□□□ 0.28
COMMD4-210ENST00000564587 IMPG2Q9BZV3 1241 aa16.79■□□□□ 0.28
COMMD4-210ENST00000564587 RPF1Q9H9Y2 349 aaKnown RBP16.79■□□□□ 0.28
COMMD4-210ENST00000564587 RNF186Q9NXI6 227 aa16.79■□□□□ 0.28
COMMD4-210ENST00000564587 INTUQ9ULD6 942 aa16.79■□□□□ 0.28
COMMD4-210ENST00000564587 GUCA1BQ9UMX6 200 aa16.79■□□□□ 0.28
COMMD4-210ENST00000564587 CTAGE9A4FU28 777 aa16.78■□□□□ 0.28
COMMD4-210ENST00000564587 ZNF263O14978 683 aa16.78■□□□□ 0.28
COMMD4-210ENST00000564587 B4GALT4O60513 344 aa16.78■□□□□ 0.28
COMMD4-210ENST00000564587 PHACTR2O75167 634 aa16.78■□□□□ 0.28
COMMD4-210ENST00000564587 HLA-DRAP01903 254 aa16.78■□□□□ 0.28
COMMD4-210ENST00000564587 TBXAS1P24557 533 aaPredicted RBP16.78■□□□□ 0.28
COMMD4-210ENST00000564587 HOXC8P31273 242 aa16.78■□□□□ 0.28
COMMD4-210ENST00000564587 PIK3CAP42336 1068 aa16.78■□□□□ 0.28
COMMD4-210ENST00000564587 PRMT2P55345 433 aa16.78■□□□□ 0.28
COMMD4-210ENST00000564587 BEX3Q00994 111 aa16.78■□□□□ 0.28
COMMD4-210ENST00000564587 CYP27A1Q02318 531 aa16.78■□□□□ 0.28
COMMD4-210ENST00000564587 GFPT1Q06210 699 aaPredicted RBP16.78■□□□□ 0.28
COMMD4-210ENST00000564587 NAB2Q15742 525 aa16.78■□□□□ 0.28
COMMD4-210ENST00000564587 AMHR2Q16671 573 aa16.78■□□□□ 0.28
COMMD4-210ENST00000564587 ARHGAP44Q17R89 818 aa16.78■□□□□ 0.28
COMMD4-210ENST00000564587 DUOXA2Q1HG44 320 aa16.78■□□□□ 0.28
COMMD4-210ENST00000564587 DCAF4L1Q3SXM0 396 aa16.78■□□□□ 0.28
COMMD4-210ENST00000564587 GNASQ5JWF2 1037 aa16.78■□□□□ 0.28
COMMD4-210ENST00000564587 ZNF571Q7Z3V5 609 aaPredicted RBP16.78■□□□□ 0.28
COMMD4-210ENST00000564587 CD302Q8IX05 232 aa16.78■□□□□ 0.28
COMMD4-210ENST00000564587 PPM1KQ8N3J5 372 aa16.78■□□□□ 0.28
COMMD4-210ENST00000564587 SHC3Q92529 594 aa16.78■□□□□ 0.28
COMMD4-210ENST00000564587 ZNF516Q92618 1163 aa16.78■□□□□ 0.28
COMMD4-210ENST00000564587 SEMA4DQ92854 862 aa16.78■□□□□ 0.28
COMMD4-210ENST00000564587 ERO1AQ96HE7 468 aa16.78■□□□□ 0.28
COMMD4-210ENST00000564587 GPR88Q9GZN0 384 aa16.78■□□□□ 0.28
COMMD4-210ENST00000564587 CDT1Q9H211 546 aa16.78■□□□□ 0.28
COMMD4-210ENST00000564587 ADAMTS10Q9H324 1103 aa16.78■□□□□ 0.28
COMMD4-210ENST00000564587 MINDY3Q9H8M7 445 aa16.78■□□□□ 0.28
COMMD4-210ENST00000564587 L2HGDHQ9H9P8 463 aa16.78■□□□□ 0.28
COMMD4-210ENST00000564587 TOPORSQ9NS56 1045 aaPredicted RBP16.78■□□□□ 0.28
COMMD4-210ENST00000564587 ADAMTS1Q9UHI8 967 aa16.78■□□□□ 0.28
COMMD4-210ENST00000564587 AJAP1Q9UKB5 411 aaPredicted RBP16.78■□□□□ 0.28
COMMD4-210ENST00000564587 A0A1B0GUA9 196 aa16.77■□□□□ 0.28
COMMD4-210ENST00000564587 TTLL13PA6NNM8 815 aa16.77■□□□□ 0.28
COMMD4-210ENST00000564587 BTNL10A8MVZ5 291 aa16.77■□□□□ 0.28
COMMD4-210ENST00000564587 TULP1O00294 542 aaPredicted RBP16.77■□□□□ 0.28
COMMD4-210ENST00000564587 FOXN3O00409 490 aaPredicted RBP16.77■□□□□ 0.28
COMMD4-210ENST00000564587 TACC1O75410 805 aa16.77■□□□□ 0.28
COMMD4-210ENST00000564587 HMGCRP04035 888 aa16.77■□□□□ 0.28
COMMD4-210ENST00000564587 BPIFB4P59827 614 aa16.77■□□□□ 0.28
COMMD4-210ENST00000564587 CACNB2Q08289 660 aaPredicted RBP16.77■□□□□ 0.28
COMMD4-210ENST00000564587 NT5DC4Q86YG4 428 aa16.77■□□□□ 0.28
COMMD4-210ENST00000564587 ARHGEF19Q8IW93 802 aa16.77■□□□□ 0.28
COMMD4-210ENST00000564587 FAM71AQ8IYT1 594 aa16.77■□□□□ 0.28
COMMD4-210ENST00000564587 TRIM58Q8NG06 486 aa16.77■□□□□ 0.28
COMMD4-210ENST00000564587 HELQQ8TDG4 1101 aa16.77■□□□□ 0.28
COMMD4-210ENST00000564587 PXYLP1Q8TE99 480 aa16.77■□□□□ 0.28
COMMD4-210ENST00000564587 SECISBP2LQ93073 1101 aaKnown RBP16.77■□□□□ 0.28
COMMD4-210ENST00000564587 LENG1Q96BZ8 264 aaPredicted RBP16.77■□□□□ 0.28
COMMD4-210ENST00000564587 ZBTB10Q96DT7 871 aa16.77■□□□□ 0.28
COMMD4-210ENST00000564587 FAXDC2Q96IV6 333 aa16.77■□□□□ 0.28
COMMD4-210ENST00000564587 ANKRD36BP1Q96IX9 119 aa16.77■□□□□ 0.28
COMMD4-210ENST00000564587 ASB7Q9H672 318 aa16.77■□□□□ 0.28
COMMD4-210ENST00000564587 WBP1LQ9NX94 342 aa16.77■□□□□ 0.28
COMMD4-210ENST00000564587 A0A087X0T9 212 aa16.76■□□□□ 0.27
COMMD4-210ENST00000564587 B4GALT5O43286 388 aa16.76■□□□□ 0.27
COMMD4-210ENST00000564587 TSPAN1O60635 241 aa16.76■□□□□ 0.27
COMMD4-210ENST00000564587 GPR32O75388 356 aa16.76■□□□□ 0.27
COMMD4-210ENST00000564587 TRPA1O75762 1119 aa16.76■□□□□ 0.27
COMMD4-210ENST00000564587 TNNC2P02585 160 aa16.76■□□□□ 0.27
COMMD4-210ENST00000564587 IQCF3P0C7M6 154 aa16.76■□□□□ 0.27
COMMD4-210ENST00000564587 FAM228BP0C875 321 aa16.76■□□□□ 0.27
COMMD4-210ENST00000564587 ARF4P18085 180 aaPredicted RBP16.76■□□□□ 0.27
COMMD4-210ENST00000564587 TNFAIP3P21580 790 aa16.76■□□□□ 0.27
COMMD4-210ENST00000564587 CST5P28325 142 aaPredicted RBP16.76■□□□□ 0.27
COMMD4-210ENST00000564587 CHMP4BP1P59074 171 aa16.76■□□□□ 0.27
COMMD4-210ENST00000564587 IFI16Q16666 785 aaKnown RBP16.76■□□□□ 0.27
COMMD4-210ENST00000564587 ZBTB41Q5SVQ8 909 aa16.76■□□□□ 0.27
COMMD4-210ENST00000564587 TDRD10Q5VZ19 366 aaKnown RBP16.76■□□□□ 0.27
COMMD4-210ENST00000564587 EEF1DP3Q658K8 133 aa16.76■□□□□ 0.27
COMMD4-210ENST00000564587 ALKBH5Q6P6C2 394 aaKnown RBP16.76■□□□□ 0.27
COMMD4-210ENST00000564587 RSPH3Q86UC2 560 aa16.76■□□□□ 0.27
COMMD4-210ENST00000564587 THNSL1Q8IYQ7 743 aa16.76■□□□□ 0.27
COMMD4-210ENST00000564587 PCSK9Q8NBP7 692 aaKnown RBP16.76■□□□□ 0.27
COMMD4-210ENST00000564587 TAF4BQ92750 862 aa16.76■□□□□ 0.27
COMMD4-210ENST00000564587 ZNF668Q96K58 619 aaPredicted RBP16.76■□□□□ 0.27
COMMD4-210ENST00000564587 ALS2CR12Q96Q35 445 aa16.76■□□□□ 0.27
COMMD4-210ENST00000564587 WDR24Q96S15 920 aa16.76■□□□□ 0.27
COMMD4-210ENST00000564587 NAPGQ99747 312 aaPredicted RBP16.76■□□□□ 0.27
COMMD4-210ENST00000564587 FAM49AQ9H0Q0 323 aaPredicted RBP16.76■□□□□ 0.27
COMMD4-210ENST00000564587 PDZD7Q9H5P4 517 aa16.76■□□□□ 0.27
COMMD4-210ENST00000564587 SAGE1Q9NXZ1 904 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms