RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 RTL10Q7L3V2 364 aa16.48■□□□□ 0.23
SPG7-210ENST00000564409 PALB2Q86YC2 1186 aa16.48■□□□□ 0.23
SPG7-210ENST00000564409 SMG7Q92540 1137 aaKnown RBP16.48■□□□□ 0.23
SPG7-210ENST00000564409 AK8Q96MA6 479 aa16.48■□□□□ 0.23
SPG7-210ENST00000564409 ACO2Q99798 780 aaKnown RBP16.48■□□□□ 0.23
SPG7-210ENST00000564409 MMTAG2Q9BU76 263 aaKnown RBP16.48■□□□□ 0.23
SPG7-210ENST00000564409 KIFC3Q9BVG8 833 aa16.48■□□□□ 0.23
SPG7-210ENST00000564409 CCDC94Q9BW85 323 aaPredicted RBP16.48■□□□□ 0.23
SPG7-210ENST00000564409 KMT5AQ9NQR1 393 aa16.48■□□□□ 0.23
SPG7-210ENST00000564409 SLC38A7Q9NVC3 462 aa16.48■□□□□ 0.23
SPG7-210ENST00000564409 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.48■□□□□ 0.23
SPG7-210ENST00000564409 GDAQ9Y2T3 454 aa16.48■□□□□ 0.23
SPG7-210ENST00000564409 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.48■□□□□ 0.23
SPG7-210ENST00000564409 ZFP37Q9Y6Q3 630 aaPredicted RBP16.48■□□□□ 0.23
SPG7-210ENST00000564409 CLUHO75153 1309 aa16.47■□□□□ 0.23
SPG7-210ENST00000564409 VWA8A3KMH1 1905 aa16.47■□□□□ 0.23
SPG7-210ENST00000564409 CASTOR2A6NHX0 329 aa16.47■□□□□ 0.23
SPG7-210ENST00000564409 ZMYND10O75800 440 aa16.47■□□□□ 0.23
SPG7-210ENST00000564409 KIF4AO95239 1232 aa16.47■□□□□ 0.23
SPG7-210ENST00000564409 BMP15O95972 392 aa16.47■□□□□ 0.23
SPG7-210ENST00000564409 EDN1P05305 212 aa16.47■□□□□ 0.23
SPG7-210ENST00000564409 ASGR2P07307 311 aa16.47■□□□□ 0.23
SPG7-210ENST00000564409 HNRNPA1P09651 372 aaKnown RBP eCLIP16.47■□□□□ 0.23
SPG7-210ENST00000564409 SCP2P22307 547 aa16.47■□□□□ 0.23
SPG7-210ENST00000564409 GJB2P29033 226 aa16.47■□□□□ 0.23
SPG7-210ENST00000564409 SMTNP53814 917 aa16.47■□□□□ 0.23
SPG7-210ENST00000564409 RTP2Q5QGT7 225 aa16.47■□□□□ 0.23
SPG7-210ENST00000564409 DAW1Q8N136 415 aa16.47■□□□□ 0.23
SPG7-210ENST00000564409 SPIRE2Q8WWL2 714 aa16.47■□□□□ 0.23
SPG7-210ENST00000564409 DDX27Q96GQ7 796 aaKnown RBP16.47■□□□□ 0.23
SPG7-210ENST00000564409 CDK5RAP3Q96JB5 506 aa16.47■□□□□ 0.23
SPG7-210ENST00000564409 B3GALT6Q96L58 329 aa16.47■□□□□ 0.23
SPG7-210ENST00000564409 PPP1R10Q96QC0 940 aaKnown RBP16.47■□□□□ 0.23
SPG7-210ENST00000564409 PAAF1Q9BRP4 392 aa16.47■□□□□ 0.23
SPG7-210ENST00000564409 PRKD2Q9BZL6 878 aa16.47■□□□□ 0.23
SPG7-210ENST00000564409 PIDD1Q9HB75 910 aa16.47■□□□□ 0.23
SPG7-210ENST00000564409 PTPRHQ9HD43 1115 aa16.47■□□□□ 0.23
SPG7-210ENST00000564409 EPS15L1Q9UBC2 864 aa16.47■□□□□ 0.23
SPG7-210ENST00000564409 SMC3Q9UQE7 1217 aa16.47■□□□□ 0.23
SPG7-210ENST00000564409 PP2D1A8MPX8 630 aa16.46■□□□□ 0.23
SPG7-210ENST00000564409 H0YCG3 227 aa16.46■□□□□ 0.23
SPG7-210ENST00000564409 RFPL2O75678 378 aa16.46■□□□□ 0.23
SPG7-210ENST00000564409 MCF2P10911 925 aa16.46■□□□□ 0.23
SPG7-210ENST00000564409 CDC25AP30304 524 aa16.46■□□□□ 0.23
SPG7-210ENST00000564409 HOXA9P31269 272 aa16.46■□□□□ 0.23
SPG7-210ENST00000564409 MAPK7Q13164 816 aa16.46■□□□□ 0.23
SPG7-210ENST00000564409 PSMD5Q16401 504 aa16.46■□□□□ 0.23
SPG7-210ENST00000564409 ZNF568Q3ZCX4 644 aa16.46■□□□□ 0.23
SPG7-210ENST00000564409 XKR4Q5GH76 650 aa16.46■□□□□ 0.23
SPG7-210ENST00000564409 IER5LQ5T953 404 aa16.46■□□□□ 0.23
SPG7-210ENST00000564409 ALKAL1Q6UXT8 129 aa16.46■□□□□ 0.23
SPG7-210ENST00000564409 SYT2Q8N9I0 419 aaPredicted RBP16.46■□□□□ 0.23
SPG7-210ENST00000564409 LNX1Q8TBB1 728 aaPredicted RBP16.46■□□□□ 0.23
SPG7-210ENST00000564409 RABGGTAQ92696 567 aa16.46■□□□□ 0.23
SPG7-210ENST00000564409 ZNF707Q96C28 371 aaPredicted RBP16.46■□□□□ 0.23
SPG7-210ENST00000564409 CLSTN3Q9BQT9 956 aa16.46■□□□□ 0.23
SPG7-210ENST00000564409 RUSC1Q9BVN2 902 aa16.46■□□□□ 0.23
SPG7-210ENST00000564409 KCNK12Q9HB15 430 aa16.46■□□□□ 0.23
SPG7-210ENST00000564409 POLD4Q9HCU8 107 aa16.46■□□□□ 0.23
SPG7-210ENST00000564409 FBXW11Q9UKB1 542 aa16.46■□□□□ 0.23
SPG7-210ENST00000564409 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.46■□□□□ 0.23
SPG7-210ENST00000564409 CACNA1HO95180 2353 aa16.45■□□□□ 0.22
SPG7-210ENST00000564409 SMIM28A0A1B0GU29 152 aa16.45■□□□□ 0.22
SPG7-210ENST00000564409 B3GAT3O94766 335 aa16.45■□□□□ 0.22
SPG7-210ENST00000564409 POU2F2P09086 479 aa16.45■□□□□ 0.22
SPG7-210ENST00000564409 SPATA31D3P0C874 917 aa16.45■□□□□ 0.22
SPG7-210ENST00000564409 PLS3P13797 630 aa16.45■□□□□ 0.22
SPG7-210ENST00000564409 FGFR3P22607 806 aa16.45■□□□□ 0.22
SPG7-210ENST00000564409 PROZP22891 400 aa16.45■□□□□ 0.22
SPG7-210ENST00000564409 GBP2P32456 591 aaPredicted RBP16.45■□□□□ 0.22
SPG7-210ENST00000564409 MRE11P49959 708 aa16.45■□□□□ 0.22
SPG7-210ENST00000564409 CLCN5P51795 746 aa16.45■□□□□ 0.22
SPG7-210ENST00000564409 STRN3Q13033 797 aa16.45■□□□□ 0.22
SPG7-210ENST00000564409 UPP1Q16831 310 aa16.45■□□□□ 0.22
SPG7-210ENST00000564409 UVSSAQ2YD98 709 aa16.45■□□□□ 0.22
SPG7-210ENST00000564409 LIN9Q5TKA1 542 aa16.45■□□□□ 0.22
SPG7-210ENST00000564409 PRSS55Q6UWB4 352 aaPredicted RBP16.45■□□□□ 0.22
SPG7-210ENST00000564409 MPZL3Q6UWV2 235 aa16.45■□□□□ 0.22
SPG7-210ENST00000564409 SPATA31D4Q6ZUB0 917 aa16.45■□□□□ 0.22
SPG7-210ENST00000564409 BRAPQ7Z569 592 aa16.45■□□□□ 0.22
SPG7-210ENST00000564409 ALYREFQ86V81 257 aaKnown RBP16.45■□□□□ 0.22
SPG7-210ENST00000564409 CEP57Q86XR8 500 aa16.45■□□□□ 0.22
SPG7-210ENST00000564409 PRSS33Q8NF86 280 aa16.45■□□□□ 0.22
SPG7-210ENST00000564409 KCNN1Q92952 543 aa16.45■□□□□ 0.22
SPG7-210ENST00000564409 ACAP3Q96P50 834 aa16.45■□□□□ 0.22
SPG7-210ENST00000564409 TCHPQ9BT92 498 aa16.45■□□□□ 0.22
SPG7-210ENST00000564409 CDT1Q9H211 546 aa16.45■□□□□ 0.22
SPG7-210ENST00000564409 MFSD1Q9H3U5 465 aa16.45■□□□□ 0.22
SPG7-210ENST00000564409 DUSP12Q9UNI6 340 aa16.45■□□□□ 0.22
SPG7-210ENST00000564409 USP20Q9Y2K6 914 aa16.45■□□□□ 0.22
SPG7-210ENST00000564409 VWA3AA6NCI4 1184 aa16.44■□□□□ 0.22
SPG7-210ENST00000564409 TOM1L1O75674 476 aa16.44■□□□□ 0.22
SPG7-210ENST00000564409 KCNE1P15382 129 aa16.44■□□□□ 0.22
SPG7-210ENST00000564409 RPL17P18621 184 aaKnown RBP16.44■□□□□ 0.22
SPG7-210ENST00000564409 RPL9P32969 192 aaKnown RBP16.44■□□□□ 0.22
SPG7-210ENST00000564409 VCPP55072 806 aaKnown RBP16.44■□□□□ 0.22
SPG7-210ENST00000564409 RAB33AQ14088 237 aa16.44■□□□□ 0.22
SPG7-210ENST00000564409 LARP1BQ659C4 914 aaKnown RBP16.44■□□□□ 0.22
SPG7-210ENST00000564409 ASTLQ6HA08 431 aaPredicted RBP16.44■□□□□ 0.22
SPG7-210ENST00000564409 ZPBP2Q6X784 338 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms