RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 CCDC94Q9BW85 323 aaPredicted RBP21.9■■□□□ 1.1
SHCBP1-203ENST00000564272 CCSER1Q9C0I3 900 aa21.9■■□□□ 1.1
SHCBP1-203ENST00000564272 RXFP1Q9HBX9 757 aa21.9■■□□□ 1.1
SHCBP1-203ENST00000564272 ANKFY1Q9P2R3 1169 aa21.9■■□□□ 1.1
SHCBP1-203ENST00000564272 ODF2LQ9ULJ1 636 aa21.9■■□□□ 1.1
SHCBP1-203ENST00000564272 SPDYE4A6NLX3 237 aa21.89■■□□□ 1.09
SHCBP1-203ENST00000564272 NCKAP1LP55160 1127 aa21.89■■□□□ 1.09
SHCBP1-203ENST00000564272 USP41Q3LFD5 358 aa21.89■■□□□ 1.09
SHCBP1-203ENST00000564272 HERC4Q5GLZ8 1057 aaPredicted RBP21.89■■□□□ 1.09
SHCBP1-203ENST00000564272 TMC5Q6UXY8 1006 aa21.89■■□□□ 1.09
SHCBP1-203ENST00000564272 RIN2Q8WYP3 895 aaPredicted RBP21.89■■□□□ 1.09
SHCBP1-203ENST00000564272 NECTIN4Q96NY8 510 aa21.89■■□□□ 1.09
SHCBP1-203ENST00000564272 USP28Q96RU2 1077 aa21.89■■□□□ 1.09
SHCBP1-203ENST00000564272 SFXN1Q9H9B4 322 aa21.89■■□□□ 1.09
SHCBP1-203ENST00000564272 GOLGA2P5Q9HBQ8 144 aa21.89■■□□□ 1.09
SHCBP1-203ENST00000564272 TSHZ2Q9NRE2 1034 aa21.89■■□□□ 1.09
SHCBP1-203ENST00000564272 LARSQ9P2J5 1176 aaKnown RBP21.89■■□□□ 1.09
SHCBP1-203ENST00000564272 FAM13AO94988 1023 aa21.88■■□□□ 1.09
SHCBP1-203ENST00000564272 BRD1O95696 1058 aa21.88■■□□□ 1.09
SHCBP1-203ENST00000564272 MYBP10242 640 aa21.88■■□□□ 1.09
SHCBP1-203ENST00000564272 RPL17P18621 184 aaKnown RBP21.88■■□□□ 1.09
SHCBP1-203ENST00000564272 IGFBP6P24592 240 aaPredicted RBP21.88■■□□□ 1.09
SHCBP1-203ENST00000564272 MTHFRP42898 656 aa21.88■■□□□ 1.09
SHCBP1-203ENST00000564272 YARSP54577 528 aaKnown RBP21.88■■□□□ 1.09
SHCBP1-203ENST00000564272 NOLC1Q14978 699 aaKnown RBP eCLIP21.88■■□□□ 1.09
SHCBP1-203ENST00000564272 RTP2Q5QGT7 225 aa21.88■■□□□ 1.09
SHCBP1-203ENST00000564272 PRSS55Q6UWB4 352 aaPredicted RBP21.88■■□□□ 1.09
SHCBP1-203ENST00000564272 GLYCTKQ8IVS8 523 aa21.88■■□□□ 1.09
SHCBP1-203ENST00000564272 LARP4BQ92615 738 aaKnown RBP21.88■■□□□ 1.09
SHCBP1-203ENST00000564272 SNX27Q96L92 541 aa21.88■■□□□ 1.09
SHCBP1-203ENST00000564272 RIPOR3Q96MK2 946 aa21.88■■□□□ 1.09
SHCBP1-203ENST00000564272 MAN1C1Q9NR34 630 aa21.88■■□□□ 1.09
SHCBP1-203ENST00000564272 TOPORSQ9NS56 1045 aaPredicted RBP21.88■■□□□ 1.09
SHCBP1-203ENST00000564272 DAXXQ9UER7 740 aaPredicted RBP21.88■■□□□ 1.09
SHCBP1-203ENST00000564272 KCNG1Q9UIX4 513 aa21.88■■□□□ 1.09
SHCBP1-203ENST00000564272 SRPRBQ9Y5M8 271 aaKnown RBP21.88■■□□□ 1.09
SHCBP1-203ENST00000564272 MYH15Q9Y2K3 1946 aa21.88■■□□□ 1.09
SHCBP1-203ENST00000564272 SMIM28A0A1B0GU29 152 aa21.87■■□□□ 1.09
SHCBP1-203ENST00000564272 K7ENM7 598 aa21.87■■□□□ 1.09
SHCBP1-203ENST00000564272 MEFVO15553 781 aaPredicted RBP21.87■■□□□ 1.09
SHCBP1-203ENST00000564272 TOM1L1O75674 476 aa21.87■■□□□ 1.09
SHCBP1-203ENST00000564272 GLUD1P00367 558 aa21.87■■□□□ 1.09
SHCBP1-203ENST00000564272 KRT18P05783 430 aaKnown RBP21.87■■□□□ 1.09
SHCBP1-203ENST00000564272 SOX4Q06945 474 aaPredicted RBP21.87■■□□□ 1.09
SHCBP1-203ENST00000564272 SEZ6Q53EL9 994 aa21.87■■□□□ 1.09
SHCBP1-203ENST00000564272 HSCBQ8IWL3 235 aa21.87■■□□□ 1.09
SHCBP1-203ENST00000564272 MYCT1Q8N699 235 aa21.87■■□□□ 1.09
SHCBP1-203ENST00000564272 ZHX3Q9H4I2 956 aa21.87■■□□□ 1.09
SHCBP1-203ENST00000564272 VWA8A3KMH1 1905 aa21.86■■□□□ 1.09
SHCBP1-203ENST00000564272 DENND4AQ7Z401 1863 aa21.86■■□□□ 1.09
SHCBP1-203ENST00000564272 CITO14578 2027 aa21.86■■□□□ 1.09
SHCBP1-203ENST00000564272 H0YCG3 227 aa21.86■■□□□ 1.09
SHCBP1-203ENST00000564272 TBCAO75347 108 aaKnown RBP21.86■■□□□ 1.09
SHCBP1-203ENST00000564272 CLCNKBP51801 687 aa21.86■■□□□ 1.09
SHCBP1-203ENST00000564272 ZNF131P52739 623 aa21.86■■□□□ 1.09
SHCBP1-203ENST00000564272 XKR4Q5GH76 650 aa21.86■■□□□ 1.09
SHCBP1-203ENST00000564272 FAM171A1Q5VUB5 890 aa21.86■■□□□ 1.09
SHCBP1-203ENST00000564272 ALKAL1Q6UXT8 129 aa21.86■■□□□ 1.09
SHCBP1-203ENST00000564272 HAUS6Q7Z4H7 955 aa21.86■■□□□ 1.09
SHCBP1-203ENST00000564272 CEP57Q86XR8 500 aa21.86■■□□□ 1.09
SHCBP1-203ENST00000564272 PALB2Q86YC2 1186 aa21.86■■□□□ 1.09
SHCBP1-203ENST00000564272 BICD1Q96G01 975 aa21.86■■□□□ 1.09
SHCBP1-203ENST00000564272 ZMAT2Q96NC0 199 aaKnown RBP21.86■■□□□ 1.09
SHCBP1-203ENST00000564272 ACAP3Q96P50 834 aa21.86■■□□□ 1.09
SHCBP1-203ENST00000564272 TTPALQ9BTX7 342 aa21.86■■□□□ 1.09
SHCBP1-203ENST00000564272 ZSCAN16Q9H4T2 348 aaPredicted RBP21.86■■□□□ 1.09
SHCBP1-203ENST00000564272 PARVGQ9HBI0 331 aa21.86■■□□□ 1.09
SHCBP1-203ENST00000564272 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.86■■□□□ 1.09
SHCBP1-203ENST00000564272 C2orf16Q68DN1 1984 aa21.86■■□□□ 1.09
SHCBP1-203ENST00000564272 C2CD4DB7Z1M9 353 aa21.85■■□□□ 1.09
SHCBP1-203ENST00000564272 SPATA31D3P0C874 917 aa21.85■■□□□ 1.09
SHCBP1-203ENST00000564272 ATAT1Q5SQI0 421 aa21.85■■□□□ 1.09
SHCBP1-203ENST00000564272 CD300LGQ6UXG3 332 aa21.85■■□□□ 1.09
SHCBP1-203ENST00000564272 ZPBP2Q6X784 338 aa21.85■■□□□ 1.09
SHCBP1-203ENST00000564272 SPATA31D4Q6ZUB0 917 aa21.85■■□□□ 1.09
SHCBP1-203ENST00000564272 GPR149Q86SP6 731 aa21.85■■□□□ 1.09
SHCBP1-203ENST00000564272 GPR65Q8IYL9 337 aa21.85■■□□□ 1.09
SHCBP1-203ENST00000564272 HAPLN2Q9GZV7 340 aa21.85■■□□□ 1.09
SHCBP1-203ENST00000564272 FNIP2Q9P278 1114 aa21.85■■□□□ 1.09
SHCBP1-203ENST00000564272 CCDC39Q9UFE4 941 aa21.85■■□□□ 1.09
SHCBP1-203ENST00000564272 NR2E1Q9Y466 385 aa21.85■■□□□ 1.09
SHCBP1-203ENST00000564272 PRR33A8MZF0 331 aa21.84■■□□□ 1.09
SHCBP1-203ENST00000564272 TMEM189-UBE2V1I3L0A0 370 aa21.84■■□□□ 1.09
SHCBP1-203ENST00000564272 B3GAT3O94766 335 aa21.84■■□□□ 1.09
SHCBP1-203ENST00000564272 DDIT3P35638 169 aa21.84■■□□□ 1.09
SHCBP1-203ENST00000564272 MATR3P43243 847 aaKnown RBP eCLIP21.84■■□□□ 1.09
SHCBP1-203ENST00000564272 CREMQ03060 361 aa21.84■■□□□ 1.09
SHCBP1-203ENST00000564272 MCL1Q07820 350 aa21.84■■□□□ 1.09
SHCBP1-203ENST00000564272 SLC39A14Q15043 492 aa21.84■■□□□ 1.09
SHCBP1-203ENST00000564272 UPP1Q16831 310 aa21.84■■□□□ 1.09
SHCBP1-203ENST00000564272 FOXD4L5Q5VV16 416 aaPredicted RBP21.84■■□□□ 1.09
SHCBP1-203ENST00000564272 C3orf58Q8NDZ4 430 aa21.84■■□□□ 1.09
SHCBP1-203ENST00000564272 FOXD4L4Q8WXT5 416 aaPredicted RBP21.84■■□□□ 1.09
SHCBP1-203ENST00000564272 UROC1Q96N76 676 aa21.84■■□□□ 1.09
SHCBP1-203ENST00000564272 CNTN3Q9P232 1028 aa21.84■■□□□ 1.09
SHCBP1-203ENST00000564272 STK17AQ9UEE5 414 aa21.84■■□□□ 1.09
SHCBP1-203ENST00000564272 TBX20Q9UMR3 447 aa21.84■■□□□ 1.09
SHCBP1-203ENST00000564272 PDCD11Q14690 1871 aaKnown RBP21.83■■□□□ 1.09
SHCBP1-203ENST00000564272 CLDN3O15551 220 aa21.83■■□□□ 1.09
SHCBP1-203ENST00000564272 TGM5O43548 720 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms