RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 GET4Q7L5D6 327 aaPredicted RBP10.5□□□□□ -0.73
CLN6-203ENST00000563917 PIK3R5Q8WYR1 880 aa10.5□□□□□ -0.73
CLN6-203ENST00000563917 BSNDQ8WZ55 320 aa10.5□□□□□ -0.73
CLN6-203ENST00000563917 DDX27Q96GQ7 796 aaKnown RBP10.5□□□□□ -0.73
CLN6-203ENST00000563917 KIFC3Q9BVG8 833 aa10.5□□□□□ -0.73
CLN6-203ENST00000563917 TIPINQ9BVW5 301 aa10.5□□□□□ -0.73
CLN6-203ENST00000563917 CCDC113Q9H0I3 377 aa10.5□□□□□ -0.73
CLN6-203ENST00000563917 C17orf75Q9HAS0 396 aa10.5□□□□□ -0.73
CLN6-203ENST00000563917 KMT5AQ9NQR1 393 aa10.5□□□□□ -0.73
CLN6-203ENST00000563917 POLIQ9UNA4 740 aa10.5□□□□□ -0.73
CLN6-203ENST00000563917 TNFSF13BQ9Y275 285 aa10.5□□□□□ -0.73
CLN6-203ENST00000563917 ZFP37Q9Y6Q3 630 aaPredicted RBP10.5□□□□□ -0.73
CLN6-203ENST00000563917 PTGESO14684 152 aa10.49□□□□□ -0.73
CLN6-203ENST00000563917 GFRA3O60609 400 aa10.49□□□□□ -0.73
CLN6-203ENST00000563917 EFEMP2O95967 443 aa10.49□□□□□ -0.73
CLN6-203ENST00000563917 C8AP07357 584 aa10.49□□□□□ -0.73
CLN6-203ENST00000563917 CFHP08603 1231 aa10.49□□□□□ -0.73
CLN6-203ENST00000563917 FSHRP23945 695 aa10.49□□□□□ -0.73
CLN6-203ENST00000563917 PRPHP41219 470 aa10.49□□□□□ -0.73
CLN6-203ENST00000563917 STRN3Q13033 797 aa10.49□□□□□ -0.73
CLN6-203ENST00000563917 NBR1Q14596 966 aa10.49□□□□□ -0.73
CLN6-203ENST00000563917 ZNF568Q3ZCX4 644 aa10.49□□□□□ -0.73
CLN6-203ENST00000563917 LILRA6Q6PI73 481 aa10.49□□□□□ -0.73
CLN6-203ENST00000563917 DCLRE1AQ6PJP8 1040 aa10.49□□□□□ -0.73
CLN6-203ENST00000563917 RTL10Q7L3V2 364 aa10.49□□□□□ -0.73
CLN6-203ENST00000563917 SIX5Q8N196 739 aa10.49□□□□□ -0.73
CLN6-203ENST00000563917 KCTD17Q8N5Z5 321 aa10.49□□□□□ -0.73
CLN6-203ENST00000563917 IGSF22Q8N9C0 903 aa10.49□□□□□ -0.73
CLN6-203ENST00000563917 SMOC2Q9H3U7 446 aa10.49□□□□□ -0.73
CLN6-203ENST00000563917 TMEM134Q9H6X4 195 aa10.49□□□□□ -0.73
CLN6-203ENST00000563917 FAM86C1Q9NVL1 165 aa10.49□□□□□ -0.73
CLN6-203ENST00000563917 EPS15L1Q9UBC2 864 aa10.49□□□□□ -0.73
CLN6-203ENST00000563917 WNT16Q9UBV4 365 aa10.49□□□□□ -0.73
CLN6-203ENST00000563917 KMT2EQ8IZD2 1858 aa10.49□□□□□ -0.73
CLN6-203ENST00000563917 TTLL13PA6NNM8 815 aa10.48□□□□□ -0.73
CLN6-203ENST00000563917 E9PMD0 336 aa10.48□□□□□ -0.73
CLN6-203ENST00000563917 H0YCG3 227 aa10.48□□□□□ -0.73
CLN6-203ENST00000563917 TMEM189-UBE2V1I3L0A0 370 aa10.48□□□□□ -0.73
CLN6-203ENST00000563917 HIP1RO75146 1068 aa10.48□□□□□ -0.73
CLN6-203ENST00000563917 SRFP11831 508 aa10.48□□□□□ -0.73
CLN6-203ENST00000563917 LAMP2P13473 410 aa10.48□□□□□ -0.73
CLN6-203ENST00000563917 AOC1P19801 751 aa10.48□□□□□ -0.73
CLN6-203ENST00000563917 HOXA9P31269 272 aa10.48□□□□□ -0.73
CLN6-203ENST00000563917 ELF1P32519 619 aa10.48□□□□□ -0.73
CLN6-203ENST00000563917 OR1D2P34982 312 aa10.48□□□□□ -0.73
CLN6-203ENST00000563917 GRM5P41594 1212 aa10.48□□□□□ -0.73
CLN6-203ENST00000563917 MATR3P43243 847 aaKnown RBP eCLIP10.48□□□□□ -0.73
CLN6-203ENST00000563917 NPTX2P47972 431 aa10.48□□□□□ -0.73
CLN6-203ENST00000563917 OSTNP61366 133 aa10.48□□□□□ -0.73
CLN6-203ENST00000563917 ECM1Q16610 540 aa10.48□□□□□ -0.73
CLN6-203ENST00000563917 UVSSAQ2YD98 709 aa10.48□□□□□ -0.73
CLN6-203ENST00000563917 GLRA4Q5JXX5 417 aa10.48□□□□□ -0.73
CLN6-203ENST00000563917 RTP2Q5QGT7 225 aa10.48□□□□□ -0.73
CLN6-203ENST00000563917 NT5DC1Q5TFE4 455 aa10.48□□□□□ -0.73
CLN6-203ENST00000563917 EEF1DP3Q658K8 133 aa10.48□□□□□ -0.73
CLN6-203ENST00000563917 ANKS3Q6ZW76 656 aa10.48□□□□□ -0.73
CLN6-203ENST00000563917 MTSS1LQ765P7 747 aa10.48□□□□□ -0.73
CLN6-203ENST00000563917 C4orf32Q8N8J7 132 aa10.48□□□□□ -0.73
CLN6-203ENST00000563917 TMEM105Q8N8V8 129 aa10.48□□□□□ -0.73
CLN6-203ENST00000563917 LNX1Q8TBB1 728 aaPredicted RBP10.48□□□□□ -0.73
CLN6-203ENST00000563917 ZNF707Q96C28 371 aaPredicted RBP10.48□□□□□ -0.73
CLN6-203ENST00000563917 ACAP3Q96P50 834 aa10.48□□□□□ -0.73
CLN6-203ENST00000563917 CLSTN3Q9BQT9 956 aa10.48□□□□□ -0.73
CLN6-203ENST00000563917 PAAF1Q9BRP4 392 aa10.48□□□□□ -0.73
CLN6-203ENST00000563917 POLD4Q9HCU8 107 aa10.48□□□□□ -0.73
CLN6-203ENST00000563917 CACNG4Q9UBN1 327 aa10.48□□□□□ -0.73
CLN6-203ENST00000563917 FBXW11Q9UKB1 542 aa10.48□□□□□ -0.73
CLN6-203ENST00000563917 USP20Q9Y2K6 914 aa10.48□□□□□ -0.73
CLN6-203ENST00000563917 NUB1Q9Y5A7 615 aa10.48□□□□□ -0.73
CLN6-203ENST00000563917 PCDHB6Q9Y5E3 794 aa10.48□□□□□ -0.73
CLN6-203ENST00000563917 DENND4AQ7Z401 1863 aa10.48□□□□□ -0.73
CLN6-203ENST00000563917 PLXNA3P51805 1871 aa10.47□□□□□ -0.73
CLN6-203ENST00000563917 C2orf16Q68DN1 1984 aa10.47□□□□□ -0.73
CLN6-203ENST00000563917 H7C4K7 107 aa10.47□□□□□ -0.73
CLN6-203ENST00000563917 MCF2P10911 925 aa10.47□□□□□ -0.73
CLN6-203ENST00000563917 HARSP12081 509 aaKnown RBP10.47□□□□□ -0.73
CLN6-203ENST00000563917 MCM2P49736 904 aa10.47□□□□□ -0.73
CLN6-203ENST00000563917 CLCNKBP51801 687 aa10.47□□□□□ -0.73
CLN6-203ENST00000563917 AXDND1Q5T1B0 1012 aaPredicted RBP10.47□□□□□ -0.73
CLN6-203ENST00000563917 GRASPQ7Z6J2 395 aaPredicted RBP10.47□□□□□ -0.73
CLN6-203ENST00000563917 SLC44A3Q8N4M1 653 aa10.47□□□□□ -0.73
CLN6-203ENST00000563917 RASSF8Q8NHQ8 419 aa10.47□□□□□ -0.73
CLN6-203ENST00000563917 SLC7A14Q8TBB6 771 aa10.47□□□□□ -0.73
CLN6-203ENST00000563917 SHDQ96IW2 340 aa10.47□□□□□ -0.73
CLN6-203ENST00000563917 PPP1R10Q96QC0 940 aaKnown RBP10.47□□□□□ -0.73
CLN6-203ENST00000563917 MYADMQ96S97 322 aa10.47□□□□□ -0.73
CLN6-203ENST00000563917 PHOX2BQ99453 314 aa10.47□□□□□ -0.73
CLN6-203ENST00000563917 ACO2Q99798 780 aaKnown RBP10.47□□□□□ -0.73
CLN6-203ENST00000563917 TARS2Q9BW92 718 aaKnown RBP10.47□□□□□ -0.73
CLN6-203ENST00000563917 KCND2Q9NZV8 630 aa10.47□□□□□ -0.73
CLN6-203ENST00000563917 LARSQ9P2J5 1176 aaKnown RBP10.47□□□□□ -0.73
CLN6-203ENST00000563917 MTRRQ9UBK8 725 aa10.47□□□□□ -0.73
CLN6-203ENST00000563917 CDH7Q9ULB5 785 aa10.47□□□□□ -0.73
CLN6-203ENST00000563917 CA14Q9ULX7 337 aa10.47□□□□□ -0.73
CLN6-203ENST00000563917 SMIM28A0A1B0GU29 152 aa10.46□□□□□ -0.73
CLN6-203ENST00000563917 VWA3AA6NCI4 1184 aa10.46□□□□□ -0.73
CLN6-203ENST00000563917 PRRG1O14668 218 aa10.46□□□□□ -0.73
CLN6-203ENST00000563917 SLC16A4O15374 487 aa10.46□□□□□ -0.73
CLN6-203ENST00000563917 CCL16O15467 120 aa10.46□□□□□ -0.73
CLN6-203ENST00000563917 NARSO43776 548 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms