RNA–Protein interactions for RNA: ENST00000563783.5

SPG7-208, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-208ENST00000563783 CDC25AP30304 524 aa27.65■■■□□ 2.02
SPG7-208ENST00000563783 GRM5P41594 1212 aa27.65■■■□□ 2.02
SPG7-208ENST00000563783 XKR4Q5GH76 650 aa27.65■■■□□ 2.02
SPG7-208ENST00000563783 LILRA6Q6PI73 481 aa27.65■■■□□ 2.02
SPG7-208ENST00000563783 KCNK18Q7Z418 384 aa27.65■■■□□ 2.02
SPG7-208ENST00000563783 RIN2Q8WYP3 895 aaPredicted RBP27.65■■■□□ 2.02
SPG7-208ENST00000563783 PPP1R10Q96QC0 940 aaKnown RBP27.65■■■□□ 2.02
SPG7-208ENST00000563783 TTPALQ9BTX7 342 aa27.65■■■□□ 2.02
SPG7-208ENST00000563783 KMT5AQ9NQR1 393 aa27.65■■■□□ 2.02
SPG7-208ENST00000563783 PROZP22891 400 aa27.64■■■□□ 2.02
SPG7-208ENST00000563783 LARP1BQ659C4 914 aaKnown RBP27.64■■■□□ 2.02
SPG7-208ENST00000563783 KANK3Q6NY19 840 aa27.64■■■□□ 2.02
SPG7-208ENST00000563783 STAMQ92783 540 aa27.64■■■□□ 2.02
SPG7-208ENST00000563783 CCDC94Q9BW85 323 aaPredicted RBP27.64■■■□□ 2.02
SPG7-208ENST00000563783 WDR6Q9NNW5 1121 aaKnown RBP27.64■■■□□ 2.02
SPG7-208ENST00000563783 VWA3AA6NCI4 1184 aa27.63■■■□□ 2.01
SPG7-208ENST00000563783 CASTOR2A6NHX0 329 aa27.63■■■□□ 2.01
SPG7-208ENST00000563783 KIF4AO95239 1232 aa27.63■■■□□ 2.01
SPG7-208ENST00000563783 MCF2P10911 925 aa27.63■■■□□ 2.01
SPG7-208ENST00000563783 SP100P23497 879 aaPredicted RBP27.63■■■□□ 2.01
SPG7-208ENST00000563783 NUBP1P53384 320 aa27.63■■■□□ 2.01
SPG7-208ENST00000563783 TMEM119Q4V9L6 283 aa27.63■■■□□ 2.01
SPG7-208ENST00000563783 CDK5RAP3Q96JB5 506 aa27.63■■■□□ 2.01
SPG7-208ENST00000563783 PNMA5Q96PV4 448 aa27.63■■■□□ 2.01
SPG7-208ENST00000563783 PAAF1Q9BRP4 392 aa27.63■■■□□ 2.01
SPG7-208ENST00000563783 GDAQ9Y2T3 454 aa27.63■■■□□ 2.01
SPG7-208ENST00000563783 WDFY4Q6ZS81 3184 aa27.62■■■□□ 2.01
SPG7-208ENST00000563783 CCDC195A0A1B0GUA6 201 aa27.62■■■□□ 2.01
SPG7-208ENST00000563783 H0YCG3 227 aa27.62■■■□□ 2.01
SPG7-208ENST00000563783 PLS3P13797 630 aa27.62■■■□□ 2.01
SPG7-208ENST00000563783 SMTNP53814 917 aa27.62■■■□□ 2.01
SPG7-208ENST00000563783 YARSP54577 528 aaKnown RBP27.62■■■□□ 2.01
SPG7-208ENST00000563783 RTP2Q5QGT7 225 aa27.62■■■□□ 2.01
SPG7-208ENST00000563783 DCLRE1AQ6PJP8 1040 aa27.62■■■□□ 2.01
SPG7-208ENST00000563783 ALKAL1Q6UXT8 129 aa27.62■■■□□ 2.01
SPG7-208ENST00000563783 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.62■■■□□ 2.01
SPG7-208ENST00000563783 TAS1R3Q7RTX0 852 aa27.62■■■□□ 2.01
SPG7-208ENST00000563783 CDT1Q9H211 546 aa27.62■■■□□ 2.01
SPG7-208ENST00000563783 POLD4Q9HCU8 107 aa27.62■■■□□ 2.01
SPG7-208ENST00000563783 SLC38A7Q9NVC3 462 aa27.62■■■□□ 2.01
SPG7-208ENST00000563783 USP20Q9Y2K6 914 aa27.62■■■□□ 2.01
SPG7-208ENST00000563783 TGM5O43548 720 aa27.61■■■□□ 2.01
SPG7-208ENST00000563783 SLC12A3P55017 1021 aa27.61■■■□□ 2.01
SPG7-208ENST00000563783 CUL4AQ13619 759 aa27.61■■■□□ 2.01
SPG7-208ENST00000563783 ZNF568Q3ZCX4 644 aa27.61■■■□□ 2.01
SPG7-208ENST00000563783 FAM171A1Q5VUB5 890 aa27.61■■■□□ 2.01
SPG7-208ENST00000563783 RTL10Q7L3V2 364 aa27.61■■■□□ 2.01
SPG7-208ENST00000563783 DDX27Q96GQ7 796 aaKnown RBP27.61■■■□□ 2.01
SPG7-208ENST00000563783 B3GALT6Q96L58 329 aa27.61■■■□□ 2.01
SPG7-208ENST00000563783 GTF3C5Q9Y5Q8 519 aaPredicted RBP27.61■■■□□ 2.01
SPG7-208ENST00000563783 ABLIM1O14639 778 aa27.6■■■□□ 2.01
SPG7-208ENST00000563783 TRAPPC3O43617 180 aa27.6■■■□□ 2.01
SPG7-208ENST00000563783 PDCP20941 246 aa27.6■■■□□ 2.01
SPG7-208ENST00000563783 MPZL3Q6UWV2 235 aa27.6■■■□□ 2.01
SPG7-208ENST00000563783 ZPBP2Q6X784 338 aa27.6■■■□□ 2.01
SPG7-208ENST00000563783 LNX1Q8TBB1 728 aaPredicted RBP27.6■■■□□ 2.01
SPG7-208ENST00000563783 ZNF707Q96C28 371 aaPredicted RBP27.6■■■□□ 2.01
SPG7-208ENST00000563783 IGSF9Q9P2J2 1179 aa27.6■■■□□ 2.01
SPG7-208ENST00000563783 LARSQ9P2J5 1176 aaKnown RBP27.6■■■□□ 2.01
SPG7-208ENST00000563783 LIMD1Q9UGP4 676 aa27.6■■■□□ 2.01
SPG7-208ENST00000563783 FBXW11Q9UKB1 542 aa27.6■■■□□ 2.01
SPG7-208ENST00000563783 ODF2LQ9ULJ1 636 aa27.6■■■□□ 2.01
SPG7-208ENST00000563783 CLUHO75153 1309 aa27.6■■■□□ 2.01
SPG7-208ENST00000563783 SMIM28A0A1B0GU29 152 aa27.59■■■□□ 2.01
SPG7-208ENST00000563783 TOM1L1O75674 476 aa27.59■■■□□ 2.01
SPG7-208ENST00000563783 ZMYND10O75800 440 aa27.59■■■□□ 2.01
SPG7-208ENST00000563783 KCNE1P15382 129 aa27.59■■■□□ 2.01
SPG7-208ENST00000563783 FGFR3P22607 806 aa27.59■■■□□ 2.01
SPG7-208ENST00000563783 HOXA9P31269 272 aa27.59■■■□□ 2.01
SPG7-208ENST00000563783 STRN3Q13033 797 aa27.59■■■□□ 2.01
SPG7-208ENST00000563783 PSMD5Q16401 504 aa27.59■■■□□ 2.01
SPG7-208ENST00000563783 UPP1Q16831 310 aa27.59■■■□□ 2.01
SPG7-208ENST00000563783 TMEM161BQ8NDZ6 487 aa27.59■■■□□ 2.01
SPG7-208ENST00000563783 SMG7Q92540 1137 aaKnown RBP27.59■■■□□ 2.01
SPG7-208ENST00000563783 TARS2Q9BW92 718 aaKnown RBP27.59■■■□□ 2.01
SPG7-208ENST00000563783 PRKD2Q9BZL6 878 aa27.59■■■□□ 2.01
SPG7-208ENST00000563783 CXCL16Q9H2A7 254 aa27.59■■■□□ 2.01
SPG7-208ENST00000563783 POU2F2P09086 479 aa27.58■■■□□ 2.01
SPG7-208ENST00000563783 HNRNPA1P09651 372 aaKnown RBP eCLIP27.58■■■□□ 2.01
SPG7-208ENST00000563783 PLA2G4BP0C869 781 aa27.58■■■□□ 2.01
SPG7-208ENST00000563783 LONP1P36776 959 aaKnown RBP27.58■■■□□ 2.01
SPG7-208ENST00000563783 PALB2Q86YC2 1186 aa27.58■■■□□ 2.01
SPG7-208ENST00000563783 RABGGTAQ92696 567 aa27.58■■■□□ 2.01
SPG7-208ENST00000563783 NXPE3Q969Y0 559 aa27.58■■■□□ 2.01
SPG7-208ENST00000563783 CALML4Q96GE6 196 aa27.58■■■□□ 2.01
SPG7-208ENST00000563783 SNX27Q96L92 541 aa27.58■■■□□ 2.01
SPG7-208ENST00000563783 CLSTN3Q9BQT9 956 aa27.58■■■□□ 2.01
SPG7-208ENST00000563783 EPS15L1Q9UBC2 864 aa27.58■■■□□ 2.01
SPG7-208ENST00000563783 CACNG4Q9UBN1 327 aa27.58■■■□□ 2.01
SPG7-208ENST00000563783 DOCK6Q96HP0 2047 aa27.57■■■□□ 2
SPG7-208ENST00000563783 SLC16A4O15374 487 aa27.57■■■□□ 2
SPG7-208ENST00000563783 MAPTP10636 758 aaKnown RBP27.57■■■□□ 2
SPG7-208ENST00000563783 UBA7P41226 1012 aa27.57■■■□□ 2
SPG7-208ENST00000563783 NHLH1Q02575 133 aa27.57■■■□□ 2
SPG7-208ENST00000563783 PRSS55Q6UWB4 352 aaPredicted RBP27.57■■■□□ 2
SPG7-208ENST00000563783 ACAP3Q96P50 834 aa27.57■■■□□ 2
SPG7-208ENST00000563783 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.57■■■□□ 2
SPG7-208ENST00000563783 CNTN3Q9P232 1028 aa27.57■■■□□ 2
SPG7-208ENST00000563783 ZFP37Q9Y6Q3 630 aaPredicted RBP27.57■■■□□ 2
SPG7-208ENST00000563783 RFPL2O75678 378 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms