RNA–Protein interactions for RNA: ENST00000563643.1

E4F1-203, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-203ENST00000563643 PAPSS2O95340 614 aaPredicted RBP20.17■□□□□ 0.82
E4F1-203ENST00000563643 CHRNB1P11230 501 aa20.17■□□□□ 0.82
E4F1-203ENST00000563643 IFNAR1P17181 557 aa20.17■□□□□ 0.82
E4F1-203ENST00000563643 CCT2P78371 535 aaKnown RBP20.17■□□□□ 0.82
E4F1-203ENST00000563643 ANKRD1Q15327 319 aa20.17■□□□□ 0.82
E4F1-203ENST00000563643 CLSTN3Q9BQT9 956 aa20.17■□□□□ 0.82
E4F1-203ENST00000563643 SH2D3AQ9BRG2 576 aa20.17■□□□□ 0.82
E4F1-203ENST00000563643 LARP6Q9BRS8 491 aaKnown RBP20.17■□□□□ 0.82
E4F1-203ENST00000563643 NCOA5Q9HCD5 579 aaKnown RBP20.17■□□□□ 0.82
E4F1-203ENST00000563643 PIAS3Q9Y6X2 628 aa20.17■□□□□ 0.82
E4F1-203ENST00000563643 FREM2Q5SZK8 3169 aa20.17■□□□□ 0.82
E4F1-203ENST00000563643 GIPC1O14908 333 aa20.16■□□□□ 0.82
E4F1-203ENST00000563643 PRPF3O43395 683 aaKnown RBP20.16■□□□□ 0.82
E4F1-203ENST00000563643 PFKFB3Q16875 520 aaPredicted RBP20.16■□□□□ 0.82
E4F1-203ENST00000563643 PRR16Q569H4 304 aa20.16■□□□□ 0.82
E4F1-203ENST00000563643 JAKMIP3Q5VZ66 844 aa20.16■□□□□ 0.82
E4F1-203ENST00000563643 POTEHQ6S545 545 aa20.16■□□□□ 0.82
E4F1-203ENST00000563643 CNNM3Q8NE01 707 aa20.16■□□□□ 0.82
E4F1-203ENST00000563643 LOXL4Q96JB6 756 aa20.16■□□□□ 0.82
E4F1-203ENST00000563643 NIFKQ9BYG3 293 aaKnown RBP20.16■□□□□ 0.82
E4F1-203ENST00000563643 RNF39Q9H2S5 420 aa20.16■□□□□ 0.82
E4F1-203ENST00000563643 MIOSQ9NXC5 875 aa20.16■□□□□ 0.82
E4F1-203ENST00000563643 IPPQ9Y573 584 aa20.16■□□□□ 0.82
E4F1-203ENST00000563643 HELZ2Q9BYK8 2649 aaKnown RBP20.16■□□□□ 0.82
E4F1-203ENST00000563643 EPN2O95208 641 aa20.15■□□□□ 0.82
E4F1-203ENST00000563643 ZIC2O95409 532 aaPredicted RBP20.15■□□□□ 0.82
E4F1-203ENST00000563643 TOP3BO95985 862 aaKnown RBP20.15■□□□□ 0.82
E4F1-203ENST00000563643 FCARP24071 287 aa20.15■□□□□ 0.82
E4F1-203ENST00000563643 NEK4P51957 841 aa20.15■□□□□ 0.82
E4F1-203ENST00000563643 SLC5A9Q2M3M2 681 aa20.15■□□□□ 0.82
E4F1-203ENST00000563643 RNF43Q68DV7 783 aa20.15■□□□□ 0.82
E4F1-203ENST00000563643 RABGGTAQ92696 567 aa20.15■□□□□ 0.82
E4F1-203ENST00000563643 IRF7Q92985 503 aa20.15■□□□□ 0.82
E4F1-203ENST00000563643 TRMT61BQ9BVS5 477 aaKnown RBP20.15■□□□□ 0.82
E4F1-203ENST00000563643 RNF26Q9BY78 433 aaPredicted RBP20.15■□□□□ 0.82
E4F1-203ENST00000563643 SMOC1Q9H4F8 434 aa20.15■□□□□ 0.82
E4F1-203ENST00000563643 BARHL2Q9NY43 387 aa20.15■□□□□ 0.82
E4F1-203ENST00000563643 SDK1Q7Z5N4 2213 aa20.15■□□□□ 0.82
E4F1-203ENST00000563643 IGSF10Q6WRI0 2623 aa20.15■□□□□ 0.82
E4F1-203ENST00000563643 COL4A2P08572 1712 aa20.14■□□□□ 0.81
E4F1-203ENST00000563643 SF3B1O75533 1304 aaKnown RBP eCLIP20.14■□□□□ 0.819e-8■■■■■ 92.4
E4F1-203ENST00000563643 CHMP2AO43633 222 aa20.14■□□□□ 0.81
E4F1-203ENST00000563643 RBM25P49756 843 aaKnown RBP20.14■□□□□ 0.81
E4F1-203ENST00000563643 AKAP17AQ02040 695 aaKnown RBP20.14■□□□□ 0.81
E4F1-203ENST00000563643 PTGDRQ13258 359 aa20.14■□□□□ 0.81
E4F1-203ENST00000563643 PLA2G2CQ5R387 149 aa20.14■□□□□ 0.81
E4F1-203ENST00000563643 AXDND1Q5T1B0 1012 aaPredicted RBP20.14■□□□□ 0.81
E4F1-203ENST00000563643 PIK3R5Q8WYR1 880 aa20.14■□□□□ 0.81
E4F1-203ENST00000563643 SCNM1Q9BWG6 230 aa20.14■□□□□ 0.81
E4F1-203ENST00000563643 C22orf23Q9BZE7 217 aa20.14■□□□□ 0.81
E4F1-203ENST00000563643 GLT8D2Q9H1C3 349 aa20.14■□□□□ 0.81
E4F1-203ENST00000563643 MINDY3Q9H8M7 445 aa20.14■□□□□ 0.81
E4F1-203ENST00000563643 TPCN1Q9ULQ1 816 aa20.14■□□□□ 0.81
E4F1-203ENST00000563643 HES2Q9Y543 173 aa20.14■□□□□ 0.81
E4F1-203ENST00000563643 CPLX1O14810 134 aa20.13■□□□□ 0.81
E4F1-203ENST00000563643 MAFO75444 373 aaPredicted RBP20.13■□□□□ 0.81
E4F1-203ENST00000563643 CEBPBP17676 345 aa20.13■□□□□ 0.81
E4F1-203ENST00000563643 STK3Q13188 491 aa20.13■□□□□ 0.81
E4F1-203ENST00000563643 PSMD5Q16401 504 aa20.13■□□□□ 0.81
E4F1-203ENST00000563643 XKR3Q5GH77 459 aa20.13■□□□□ 0.81
E4F1-203ENST00000563643 WDR5BQ86VZ2 330 aa20.13■□□□□ 0.81
E4F1-203ENST00000563643 MAP4K3Q8IVH8 894 aa20.13■□□□□ 0.81
E4F1-203ENST00000563643 LNX1Q8TBB1 728 aaPredicted RBP20.13■□□□□ 0.81
E4F1-203ENST00000563643 EIF2AQ9BY44 585 aaKnown RBP20.13■□□□□ 0.81
E4F1-203ENST00000563643 SLKQ9H2G2 1235 aaPredicted RBP20.13■□□□□ 0.81
E4F1-203ENST00000563643 ZNF334Q9HCZ1 680 aaPredicted RBP20.13■□□□□ 0.81
E4F1-203ENST00000563643 TRPV5Q9NQA5 729 aa20.13■□□□□ 0.81
E4F1-203ENST00000563643 RBM12Q9NTZ6 932 aaKnown RBP20.13■□□□□ 0.81
E4F1-203ENST00000563643 COL4A3BPQ9Y5P4 624 aa20.13■□□□□ 0.81
E4F1-203ENST00000563643 NOTCH4Q99466 2003 aa20.13■□□□□ 0.81
E4F1-203ENST00000563643 ADAM12O43184 909 aa20.12■□□□□ 0.81
E4F1-203ENST00000563643 PFKFB2O60825 505 aa20.12■□□□□ 0.81
E4F1-203ENST00000563643 TADA2AO75478 443 aa20.12■□□□□ 0.81
E4F1-203ENST00000563643 RHOP08100 348 aa20.12■□□□□ 0.81
E4F1-203ENST00000563643 CCNE1P24864 410 aa20.12■□□□□ 0.81
E4F1-203ENST00000563643 SFNP31947 248 aa20.12■□□□□ 0.81
E4F1-203ENST00000563643 RAP1GAPP47736 663 aa20.12■□□□□ 0.81
E4F1-203ENST00000563643 JAK3P52333 1124 aa20.12■□□□□ 0.81
E4F1-203ENST00000563643 UVSSAQ2YD98 709 aa20.12■□□□□ 0.81
E4F1-203ENST00000563643 CPLX2Q6PUV4 134 aaKnown RBP20.12■□□□□ 0.81
E4F1-203ENST00000563643 Q6ZS52 159 aa20.12■□□□□ 0.81
E4F1-203ENST00000563643 SRGAP1Q7Z6B7 1085 aa20.12■□□□□ 0.81
E4F1-203ENST00000563643 CEP57Q86XR8 500 aa20.12■□□□□ 0.81
E4F1-203ENST00000563643 TRIM22Q8IYM9 498 aa20.12■□□□□ 0.81
E4F1-203ENST00000563643 LENG9Q96B70 501 aa20.12■□□□□ 0.81
E4F1-203ENST00000563643 KIF2CQ99661 725 aa20.12■□□□□ 0.81
E4F1-203ENST00000563643 TTPALQ9BTX7 342 aa20.12■□□□□ 0.81
E4F1-203ENST00000563643 SLC26A6Q9BXS9 759 aa20.12■□□□□ 0.81
E4F1-203ENST00000563643 UPF2Q9HAU5 1272 aaKnown RBP20.12■□□□□ 0.81
E4F1-203ENST00000563643 ZFP14Q9HCL3 533 aa20.12■□□□□ 0.81
E4F1-203ENST00000563643 C2orf42Q9NWW7 574 aa20.12■□□□□ 0.81
E4F1-203ENST00000563643 WDR81Q562E7 1941 aa20.12■□□□□ 0.81
E4F1-203ENST00000563643 ESYT2A0FGR8 921 aa20.11■□□□□ 0.81
E4F1-203ENST00000563643 STBD1O95210 358 aa20.11■□□□□ 0.81
E4F1-203ENST00000563643 GDI1P31150 447 aa20.11■□□□□ 0.81
E4F1-203ENST00000563643 HOXA6P31267 233 aa20.11■□□□□ 0.81
E4F1-203ENST00000563643 HOXC13P31276 330 aa20.11■□□□□ 0.81
E4F1-203ENST00000563643 SCRN1Q12765 414 aa20.11■□□□□ 0.81
E4F1-203ENST00000563643 LRRC32Q14392 662 aa20.11■□□□□ 0.81
E4F1-203ENST00000563643 FAM78AQ5JUQ0 283 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms