RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 IFNB1P01574 187 aa13.56□□□□□ -0.24
CCDC187-201ENST00000563590 CYP11B2P19099 503 aa13.56□□□□□ -0.24
CCDC187-201ENST00000563590 TM4SF1P30408 202 aa13.56□□□□□ -0.24
CCDC187-201ENST00000563590 DHX34Q14147 1143 aaKnown RBP13.56□□□□□ -0.24
CCDC187-201ENST00000563590 PPP2R5EQ16537 467 aa13.56□□□□□ -0.24
CCDC187-201ENST00000563590 KAZNQ674X7 775 aa13.56□□□□□ -0.24
CCDC187-201ENST00000563590 RNF207Q6ZRF8 634 aa13.56□□□□□ -0.24
CCDC187-201ENST00000563590 MASTLQ96GX5 879 aa13.56□□□□□ -0.24
CCDC187-201ENST00000563590 EPAS1Q99814 870 aa13.56□□□□□ -0.24
CCDC187-201ENST00000563590 KCNMB3Q9NPA1 279 aa13.56□□□□□ -0.24
CCDC187-201ENST00000563590 PHTF1Q9UMS5 762 aa13.56□□□□□ -0.24
CCDC187-201ENST00000563590 DAGLAQ9Y4D2 1042 aa13.56□□□□□ -0.24
CCDC187-201ENST00000563590 ITGB4P16144 1822 aa13.56□□□□□ -0.24
CCDC187-201ENST00000563590 ABCA3Q99758 1704 aa13.56□□□□□ -0.24
CCDC187-201ENST00000563590 KIAA1551Q9HCM1 1747 aa13.56□□□□□ -0.24
CCDC187-201ENST00000563590 RSPH10B2B2RC85 870 aa13.56□□□□□ -0.24
CCDC187-201ENST00000563590 PODXLO00592 558 aa13.56□□□□□ -0.24
CCDC187-201ENST00000563590 RSPH10BP0C881 870 aa13.56□□□□□ -0.24
CCDC187-201ENST00000563590 COMTP21964 271 aa13.56□□□□□ -0.24
CCDC187-201ENST00000563590 CHRNA3P32297 505 aa13.56□□□□□ -0.24
CCDC187-201ENST00000563590 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.56□□□□□ -0.24
CCDC187-201ENST00000563590 FAM186BQ8IYM0 893 aa13.56□□□□□ -0.24
CCDC187-201ENST00000563590 CNKSR1Q969H4 720 aa13.56□□□□□ -0.24
CCDC187-201ENST00000563590 FAM84AQ96KN4 292 aa13.56□□□□□ -0.24
CCDC187-201ENST00000563590 CYP39A1Q9NYL5 469 aa13.56□□□□□ -0.24
CCDC187-201ENST00000563590 GOLGA8IPA6NC78 632 aa13.55□□□□□ -0.24
CCDC187-201ENST00000563590 GOLGA8JA6NMD2 632 aa13.55□□□□□ -0.24
CCDC187-201ENST00000563590 EXOC3O60645 756 aa13.55□□□□□ -0.24
CCDC187-201ENST00000563590 AKAP3O75969 853 aa13.55□□□□□ -0.24
CCDC187-201ENST00000563590 KRT36O76013 467 aa13.55□□□□□ -0.24
CCDC187-201ENST00000563590 NR3C1P04150 777 aa13.55□□□□□ -0.24
CCDC187-201ENST00000563590 FESP07332 822 aa13.55□□□□□ -0.24
CCDC187-201ENST00000563590 SP100P23497 879 aaPredicted RBP13.55□□□□□ -0.24
CCDC187-201ENST00000563590 EPHA7Q15375 998 aa13.55□□□□□ -0.24
CCDC187-201ENST00000563590 CCDC62Q6P9F0 684 aa13.55□□□□□ -0.24
CCDC187-201ENST00000563590 ANKRD35Q8N283 1001 aa13.55□□□□□ -0.24
CCDC187-201ENST00000563590 MAIP1Q8WWC4 291 aa13.55□□□□□ -0.24
CCDC187-201ENST00000563590 SCG3Q8WXD2 468 aaKnown RBP13.55□□□□□ -0.24
CCDC187-201ENST00000563590 TEKT1Q969V4 418 aa13.55□□□□□ -0.24
CCDC187-201ENST00000563590 SIX2Q9NPC8 291 aa13.55□□□□□ -0.24
CCDC187-201ENST00000563590 DDX4Q9NQI0 724 aaKnown RBP13.55□□□□□ -0.24
CCDC187-201ENST00000563590 NENFQ9UMX5 172 aa13.55□□□□□ -0.24
CCDC187-201ENST00000563590 A0A0A6YYK5 440 aaPredicted RBP13.55□□□□□ -0.24
CCDC187-201ENST00000563590 ESYT2A0FGR8 921 aa13.55□□□□□ -0.24
CCDC187-201ENST00000563590 GOLGA8SH3BPF8 625 aa13.55□□□□□ -0.24
CCDC187-201ENST00000563590 GOLGA8MH3BSY2 632 aa13.55□□□□□ -0.24
CCDC187-201ENST00000563590 RTN3O95197 1032 aaPredicted RBP13.55□□□□□ -0.24
CCDC187-201ENST00000563590 TMEM132AQ24JP5 1023 aa13.55□□□□□ -0.24
CCDC187-201ENST00000563590 EDRF1Q3B7T1 1238 aa13.55□□□□□ -0.24
CCDC187-201ENST00000563590 MTDHQ86UE4 582 aaKnown RBP13.55□□□□□ -0.24
CCDC187-201ENST00000563590 SNRNP27Q8WVK2 155 aaKnown RBP13.55□□□□□ -0.24
CCDC187-201ENST00000563590 UBE2TQ9NPD8 197 aaPredicted RBP13.55□□□□□ -0.24
CCDC187-201ENST00000563590 ARHGEF3Q9NR81 526 aa13.55□□□□□ -0.24
CCDC187-201ENST00000563590 TMOD2Q9NZR1 351 aa13.55□□□□□ -0.24
CCDC187-201ENST00000563590 LAMB1P07942 1786 aa13.55□□□□□ -0.24
CCDC187-201ENST00000563590 ATP6V1C1P21283 382 aa13.55□□□□□ -0.24
CCDC187-201ENST00000563590 CHKAP35790 457 aa13.55□□□□□ -0.24
CCDC187-201ENST00000563590 KCNA1Q09470 495 aa13.55□□□□□ -0.24
CCDC187-201ENST00000563590 AOC3Q16853 763 aa13.55□□□□□ -0.24
CCDC187-201ENST00000563590 OLFML2BQ68BL8 750 aa13.55□□□□□ -0.24
CCDC187-201ENST00000563590 AGGF1Q8N302 714 aaeCLIP13.55□□□□□ -0.24
CCDC187-201ENST00000563590 JDP2Q8WYK2 163 aa13.55□□□□□ -0.24
CCDC187-201ENST00000563590 KIFAP3Q92845 792 aa13.55□□□□□ -0.24
CCDC187-201ENST00000563590 FAM161BQ96MY7 647 aa13.55□□□□□ -0.24
CCDC187-201ENST00000563590 GRHL1Q9NZI5 618 aa13.55□□□□□ -0.24
CCDC187-201ENST00000563590 DNM3Q9UQ16 869 aa13.55□□□□□ -0.24
CCDC187-201ENST00000563590 PITPNM2Q9BZ72 1349 aa13.54□□□□□ -0.24
CCDC187-201ENST00000563590 GAS8O95995 478 aa13.54□□□□□ -0.24
CCDC187-201ENST00000563590 PSMC6P62333 389 aa13.54□□□□□ -0.24
CCDC187-201ENST00000563590 TMED1Q13445 227 aa13.54□□□□□ -0.24
CCDC187-201ENST00000563590 QRICH1Q2TAL8 776 aa13.54□□□□□ -0.24
CCDC187-201ENST00000563590 SPDYCQ5MJ68 293 aa13.54□□□□□ -0.24
CCDC187-201ENST00000563590 C6orf163Q5TEZ5 329 aa13.54□□□□□ -0.24
CCDC187-201ENST00000563590 PPP1R21Q6ZMI0 780 aa13.54□□□□□ -0.24
CCDC187-201ENST00000563590 DPH6Q7L8W6 267 aa13.54□□□□□ -0.24
CCDC187-201ENST00000563590 CPNE8Q86YQ8 564 aa13.54□□□□□ -0.24
CCDC187-201ENST00000563590 FBXO41Q8TF61 875 aa13.54□□□□□ -0.24
CCDC187-201ENST00000563590 ZNF668Q96K58 619 aaPredicted RBP13.54□□□□□ -0.24
CCDC187-201ENST00000563590 NMRK1Q9NWW6 199 aa13.54□□□□□ -0.24
CCDC187-201ENST00000563590 SLC4A7Q9Y6M7 1214 aa13.54□□□□□ -0.24
CCDC187-201ENST00000563590 PLSCR1O15162 318 aa13.54□□□□□ -0.24
CCDC187-201ENST00000563590 RARGP13631 454 aa13.54□□□□□ -0.24
CCDC187-201ENST00000563590 MARK3P27448 753 aa13.54□□□□□ -0.24
CCDC187-201ENST00000563590 ZC2HC1CQ53FD0 456 aaPredicted RBP13.54□□□□□ -0.24
CCDC187-201ENST00000563590 ARSHQ5FYA8 562 aa13.54□□□□□ -0.24
CCDC187-201ENST00000563590 PRAMEF18Q5VWM3 479 aa13.54□□□□□ -0.24
CCDC187-201ENST00000563590 FRMD5Q7Z6J6 570 aa13.54□□□□□ -0.24
CCDC187-201ENST00000563590 PALB2Q86YC2 1186 aa13.54□□□□□ -0.24
CCDC187-201ENST00000563590 PRELID2Q8N945 189 aa13.54□□□□□ -0.24
CCDC187-201ENST00000563590 CSRNP1Q96S65 589 aa13.54□□□□□ -0.24
CCDC187-201ENST00000563590 GORASP1Q9BQQ3 440 aa13.54□□□□□ -0.24
CCDC187-201ENST00000563590 DENND2DQ9H6A0 471 aaPredicted RBP13.54□□□□□ -0.24
CCDC187-201ENST00000563590 FRMD4BQ9Y2L6 1034 aa13.54□□□□□ -0.24
CCDC187-201ENST00000563590 SYNGAP1Q96PV0 1343 aa13.54□□□□□ -0.24
CCDC187-201ENST00000563590 DCTN3O75935 186 aa13.53□□□□□ -0.24
CCDC187-201ENST00000563590 TTLL1O95922 423 aa13.53□□□□□ -0.24
CCDC187-201ENST00000563590 TROVE2P10155 538 aaKnown RBP eCLIP13.53□□□□□ -0.24
CCDC187-201ENST00000563590 ESRRAP11474 423 aaPredicted RBP13.53□□□□□ -0.24
CCDC187-201ENST00000563590 HOXA7P31268 230 aaPredicted RBP13.53□□□□□ -0.24
CCDC187-201ENST00000563590 ITGA8P53708 1063 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms