RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 SV2BQ7L1I2 683 aa20.83■□□□□ 0.93
TRADD-203ENST00000563348 GPR65Q8IYL9 337 aa20.83■□□□□ 0.93
TRADD-203ENST00000563348 ACAP3Q96P50 834 aa20.83■□□□□ 0.93
TRADD-203ENST00000563348 POP1Q99575 1024 aaKnown RBP20.83■□□□□ 0.93
TRADD-203ENST00000563348 PANK2Q9BZ23 570 aa20.83■□□□□ 0.93
TRADD-203ENST00000563348 ZHX3Q9H4I2 956 aa20.83■□□□□ 0.93
TRADD-203ENST00000563348 RXFP1Q9HBX9 757 aa20.83■□□□□ 0.93
TRADD-203ENST00000563348 CACNG4Q9UBN1 327 aa20.83■□□□□ 0.93
TRADD-203ENST00000563348 TBX20Q9UMR3 447 aa20.83■□□□□ 0.93
TRADD-203ENST00000563348 SMIM28A0A1B0GU29 152 aa20.82■□□□□ 0.92
TRADD-203ENST00000563348 C2CD2LO14523 706 aa20.82■□□□□ 0.92
TRADD-203ENST00000563348 CLDN3O15551 220 aa20.82■□□□□ 0.92
TRADD-203ENST00000563348 YEATS4O95619 227 aa20.82■□□□□ 0.92
TRADD-203ENST00000563348 F13A1P00488 732 aa20.82■□□□□ 0.92
TRADD-203ENST00000563348 EPCAMP16422 314 aa20.82■□□□□ 0.92
TRADD-203ENST00000563348 KLRC2P26717 231 aa20.82■□□□□ 0.92
TRADD-203ENST00000563348 MCL1Q07820 350 aa20.82■□□□□ 0.92
TRADD-203ENST00000563348 USP41Q3LFD5 358 aa20.82■□□□□ 0.92
TRADD-203ENST00000563348 KIAA1841Q6NSI8 718 aa20.82■□□□□ 0.92
TRADD-203ENST00000563348 FIZ1Q96SL8 496 aa20.82■□□□□ 0.92
TRADD-203ENST00000563348 MYH11P35749 1972 aa20.82■□□□□ 0.92
TRADD-203ENST00000563348 NOLC1Q14978 699 aaKnown RBP eCLIP20.81■□□□□ 0.92
TRADD-203ENST00000563348 GLRA4Q5JXX5 417 aa20.81■□□□□ 0.92
TRADD-203ENST00000563348 DDX12PQ92771 950 aa20.81■□□□□ 0.92
TRADD-203ENST00000563348 KHSRPQ92945 711 aaKnown RBP eCLIP20.81■□□□□ 0.92
TRADD-203ENST00000563348 APOL5Q9BWW9 433 aa20.81■□□□□ 0.92
TRADD-203ENST00000563348 ADAM7Q9H2U9 754 aa20.81■□□□□ 0.92
TRADD-203ENST00000563348 DZANK1Q9NVP4 752 aa20.81■□□□□ 0.92
TRADD-203ENST00000563348 ANKFY1Q9P2R3 1169 aa20.81■□□□□ 0.92
TRADD-203ENST00000563348 SF3B1O75533 1304 aaKnown RBP eCLIP20.8■□□□□ 0.921e-8■■■■■ 103.4
TRADD-203ENST00000563348 A0A087X0B3 334 aa20.8■□□□□ 0.92
TRADD-203ENST00000563348 MYMKA6NI61 221 aa20.8■□□□□ 0.92
TRADD-203ENST00000563348 K7ENM7 598 aa20.8■□□□□ 0.92
TRADD-203ENST00000563348 TEX28O15482 410 aa20.8■□□□□ 0.92
TRADD-203ENST00000563348 KIF4AO95239 1232 aa20.8■□□□□ 0.92
TRADD-203ENST00000563348 PIGRP01833 764 aa20.8■□□□□ 0.92
TRADD-203ENST00000563348 HARSP12081 509 aaKnown RBP20.8■□□□□ 0.92
TRADD-203ENST00000563348 KCNE1P15382 129 aa20.8■□□□□ 0.92
TRADD-203ENST00000563348 ABCD1P33897 745 aa20.8■□□□□ 0.92
TRADD-203ENST00000563348 STAT6P42226 847 aa20.8■□□□□ 0.92
TRADD-203ENST00000563348 CLCN4P51793 760 aa20.8■□□□□ 0.92
TRADD-203ENST00000563348 GTF2BQ00403 316 aa20.8■□□□□ 0.92
TRADD-203ENST00000563348 ITIH3Q06033 890 aa20.8■□□□□ 0.92
TRADD-203ENST00000563348 PKP1Q13835 747 aa20.8■□□□□ 0.92
TRADD-203ENST00000563348 ATL3Q6DD88 541 aa20.8■□□□□ 0.92
TRADD-203ENST00000563348 DCLRE1AQ6PJP8 1040 aa20.8■□□□□ 0.92
TRADD-203ENST00000563348 DYMQ7RTS9 669 aa20.8■□□□□ 0.92
TRADD-203ENST00000563348 BICD1Q96G01 975 aa20.8■□□□□ 0.92
TRADD-203ENST00000563348 B3GALT6Q96L58 329 aa20.8■□□□□ 0.92
TRADD-203ENST00000563348 SNX27Q96L92 541 aa20.8■□□□□ 0.92
TRADD-203ENST00000563348 PHF7Q9BWX1 381 aaPredicted RBP20.8■□□□□ 0.92
TRADD-203ENST00000563348 HAPLN2Q9GZV7 340 aa20.8■□□□□ 0.92
TRADD-203ENST00000563348 ST6GALNAC4Q9H4F1 302 aa20.8■□□□□ 0.92
TRADD-203ENST00000563348 EPHX3Q9H6B9 360 aa20.8■□□□□ 0.92
TRADD-203ENST00000563348 C5orf42Q9H799 3197 aa20.8■□□□□ 0.92
TRADD-203ENST00000563348 PI4K2BG5E9Z4 385 aa20.79■□□□□ 0.92
TRADD-203ENST00000563348 TMEM189-UBE2V1I3L0A0 370 aa20.79■□□□□ 0.92
TRADD-203ENST00000563348 CUTAO60888 179 aa20.79■□□□□ 0.92
TRADD-203ENST00000563348 NMT1P30419 496 aaKnown RBP20.79■□□□□ 0.92
TRADD-203ENST00000563348 LIG4P49917 911 aa20.79■□□□□ 0.92
TRADD-203ENST00000563348 CBX2Q14781 532 aaPredicted RBP20.79■□□□□ 0.92
TRADD-203ENST00000563348 SLC10A6Q3KNW5 377 aa20.79■□□□□ 0.92
TRADD-203ENST00000563348 FOXD4L6Q3SYB3 417 aaPredicted RBP20.79■□□□□ 0.92
TRADD-203ENST00000563348 CES5AQ6NT32 575 aa20.79■□□□□ 0.92
TRADD-203ENST00000563348 FOXD4L3Q6VB84 417 aaPredicted RBP20.79■□□□□ 0.92
TRADD-203ENST00000563348 DNAJC19Q96DA6 116 aa20.79■□□□□ 0.92
TRADD-203ENST00000563348 FBXL18Q96ME1 805 aa20.79■□□□□ 0.92
TRADD-203ENST00000563348 UROC1Q96N76 676 aa20.79■□□□□ 0.92
TRADD-203ENST00000563348 ZMAT2Q96NC0 199 aaKnown RBP20.79■□□□□ 0.92
TRADD-203ENST00000563348 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.79■□□□□ 0.92
TRADD-203ENST00000563348 SLC38A7Q9NVC3 462 aa20.79■□□□□ 0.92
TRADD-203ENST00000563348 CNTN3Q9P232 1028 aa20.79■□□□□ 0.92
TRADD-203ENST00000563348 MEFVO15553 781 aaPredicted RBP20.78■□□□□ 0.92
TRADD-203ENST00000563348 B3GAT3O94766 335 aa20.78■□□□□ 0.92
TRADD-203ENST00000563348 ADH1AP07327 375 aa20.78■□□□□ 0.92
TRADD-203ENST00000563348 CLTAP09496 248 aa20.78■□□□□ 0.92
TRADD-203ENST00000563348 MATR3P43243 847 aaKnown RBP eCLIP20.78■□□□□ 0.92
TRADD-203ENST00000563348 CLCNKBP51801 687 aa20.78■□□□□ 0.92
TRADD-203ENST00000563348 ELAVL2Q12926 359 aaKnown RBP20.78■□□□□ 0.92
TRADD-203ENST00000563348 UPP1Q16831 310 aa20.78■□□□□ 0.92
TRADD-203ENST00000563348 SEZ6Q53EL9 994 aa20.78■□□□□ 0.92
TRADD-203ENST00000563348 FAM171A1Q5VUB5 890 aa20.78■□□□□ 0.92
TRADD-203ENST00000563348 ZNF720Q7Z2F6 126 aa20.78■□□□□ 0.92
TRADD-203ENST00000563348 PDILTQ8N807 584 aa20.78■□□□□ 0.92
TRADD-203ENST00000563348 C12orf76Q8N812 135 aaPredicted RBP20.78■□□□□ 0.92
TRADD-203ENST00000563348 HASPINQ8TF76 798 aa20.78■□□□□ 0.92
TRADD-203ENST00000563348 RIN2Q8WYP3 895 aaPredicted RBP20.78■□□□□ 0.92
TRADD-203ENST00000563348 DDX27Q96GQ7 796 aaKnown RBP20.78■□□□□ 0.92
TRADD-203ENST00000563348 TTPALQ9BTX7 342 aa20.78■□□□□ 0.92
TRADD-203ENST00000563348 FNIP2Q9P278 1114 aa20.78■□□□□ 0.92
TRADD-203ENST00000563348 SEL1LQ9UBV2 794 aa20.78■□□□□ 0.92
TRADD-203ENST00000563348 LOC730098B7Z3J9 87 aa20.77■□□□□ 0.92
TRADD-203ENST00000563348 HNRNPDLO14979 420 aaKnown RBP20.77■□□□□ 0.92
TRADD-203ENST00000563348 C1RP00736 705 aa20.77■□□□□ 0.92
TRADD-203ENST00000563348 GAP43P17677 238 aa20.77■□□□□ 0.92
TRADD-203ENST00000563348 IGFBP6P24592 240 aaPredicted RBP20.77■□□□□ 0.92
TRADD-203ENST00000563348 SOX4Q06945 474 aaPredicted RBP20.77■□□□□ 0.92
TRADD-203ENST00000563348 KYAT1Q16773 422 aa20.77■□□□□ 0.92
TRADD-203ENST00000563348 ZC2HC1CQ53FD0 456 aaPredicted RBP20.77■□□□□ 0.92
TRADD-203ENST00000563348 RTP2Q5QGT7 225 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms