RNA–Protein interactions for RNA: ENST00000563240.1

LPCAT4-204, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 939 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-204ENST00000563240 PBXIP1Q96AQ6 731 aa16.73■□□□□ 0.27
LPCAT4-204ENST00000563240 FAM122AQ96E09 287 aa16.73■□□□□ 0.27
LPCAT4-204ENST00000563240 AK8Q96MA6 479 aa16.73■□□□□ 0.27
LPCAT4-204ENST00000563240 TIPINQ9BVW5 301 aa16.73■□□□□ 0.27
LPCAT4-204ENST00000563240 C17orf75Q9HAS0 396 aa16.73■□□□□ 0.27
LPCAT4-204ENST00000563240 GOLGA2P5Q9HBQ8 144 aa16.73■□□□□ 0.27
LPCAT4-204ENST00000563240 PTPRHQ9HD43 1115 aa16.73■□□□□ 0.27
LPCAT4-204ENST00000563240 ANKFY1Q9P2R3 1169 aa16.73■□□□□ 0.27
LPCAT4-204ENST00000563240 SMIM28A0A1B0GU29 152 aa16.72■□□□□ 0.27
LPCAT4-204ENST00000563240 TGM5O43548 720 aa16.72■□□□□ 0.27
LPCAT4-204ENST00000563240 B3GAT3O94766 335 aa16.72■□□□□ 0.27
LPCAT4-204ENST00000563240 PDCP20941 246 aa16.72■□□□□ 0.27
LPCAT4-204ENST00000563240 SYT1P21579 422 aa16.72■□□□□ 0.27
LPCAT4-204ENST00000563240 MARCKSP29966 332 aaPredicted RBP16.72■□□□□ 0.27
LPCAT4-204ENST00000563240 GRM5P41594 1212 aa16.72■□□□□ 0.27
LPCAT4-204ENST00000563240 MATR3P43243 847 aaKnown RBP eCLIP16.72■□□□□ 0.27
LPCAT4-204ENST00000563240 ARSHQ5FYA8 562 aa16.72■□□□□ 0.27
LPCAT4-204ENST00000563240 GPBP1Q86WP2 473 aa16.72■□□□□ 0.27
LPCAT4-204ENST00000563240 TDRD5Q8NAT2 981 aaKnown RBP16.72■□□□□ 0.27
LPCAT4-204ENST00000563240 KREMEN2Q8NCW0 462 aa16.72■□□□□ 0.27
LPCAT4-204ENST00000563240 TMEM161BQ8NDZ6 487 aa16.72■□□□□ 0.27
LPCAT4-204ENST00000563240 LRRC15Q8TF66 581 aa16.72■□□□□ 0.27
LPCAT4-204ENST00000563240 SPIRE2Q8WWL2 714 aa16.72■□□□□ 0.27
LPCAT4-204ENST00000563240 ACAP3Q96P50 834 aa16.72■□□□□ 0.27
LPCAT4-204ENST00000563240 PPP1R10Q96QC0 940 aaKnown RBP16.72■□□□□ 0.27
LPCAT4-204ENST00000563240 NTPCRQ9BSD7 190 aaKnown RBP16.72■□□□□ 0.27
LPCAT4-204ENST00000563240 TTPALQ9BTX7 342 aa16.72■□□□□ 0.27
LPCAT4-204ENST00000563240 SMOC2Q9H3U7 446 aa16.72■□□□□ 0.27
LPCAT4-204ENST00000563240 ZHX3Q9H4I2 956 aa16.72■□□□□ 0.27
LPCAT4-204ENST00000563240 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.72■□□□□ 0.27
LPCAT4-204ENST00000563240 I3L4J1 428 aa16.71■□□□□ 0.27
LPCAT4-204ENST00000563240 BMP15O95972 392 aa16.71■□□□□ 0.27
LPCAT4-204ENST00000563240 KRT18P05783 430 aaKnown RBP16.71■□□□□ 0.27
LPCAT4-204ENST00000563240 MAPTP10636 758 aaKnown RBP16.71■□□□□ 0.27
LPCAT4-204ENST00000563240 MCF2P10911 925 aa16.71■□□□□ 0.27
LPCAT4-204ENST00000563240 PLCG1P19174 1290 aa16.71■□□□□ 0.27
LPCAT4-204ENST00000563240 MCM6Q14566 821 aa16.71■□□□□ 0.27
LPCAT4-204ENST00000563240 ELMSAN1Q6PJG2 1045 aa16.71■□□□□ 0.27
LPCAT4-204ENST00000563240 DCLRE1AQ6PJP8 1040 aa16.71■□□□□ 0.27
LPCAT4-204ENST00000563240 MPZL3Q6UWV2 235 aa16.71■□□□□ 0.27
LPCAT4-204ENST00000563240 CCDC149Q6ZUS6 474 aa16.71■□□□□ 0.27
LPCAT4-204ENST00000563240 KCTD17Q8N5Z5 321 aa16.71■□□□□ 0.27
LPCAT4-204ENST00000563240 LNX1Q8TBB1 728 aaPredicted RBP16.71■□□□□ 0.27
LPCAT4-204ENST00000563240 EPSTI1Q96J88 318 aa16.71■□□□□ 0.27
LPCAT4-204ENST00000563240 REEP2Q9BRK0 252 aa16.71■□□□□ 0.27
LPCAT4-204ENST00000563240 PIDD1Q9HB75 910 aa16.71■□□□□ 0.27
LPCAT4-204ENST00000563240 TOPORSQ9NS56 1045 aaPredicted RBP16.71■□□□□ 0.27
LPCAT4-204ENST00000563240 BLOC1S4Q9NUP1 217 aa16.71■□□□□ 0.27
LPCAT4-204ENST00000563240 KCND2Q9NZV8 630 aa16.71■□□□□ 0.27
LPCAT4-204ENST00000563240 FNIP2Q9P278 1114 aa16.71■□□□□ 0.27
LPCAT4-204ENST00000563240 ABLIM1O14639 778 aa16.7■□□□□ 0.26
LPCAT4-204ENST00000563240 LONP1P36776 959 aaKnown RBP16.7■□□□□ 0.26
LPCAT4-204ENST00000563240 SOX4Q06945 474 aaPredicted RBP16.7■□□□□ 0.26
LPCAT4-204ENST00000563240 SIGLEC14Q08ET2 396 aa16.7■□□□□ 0.26
LPCAT4-204ENST00000563240 PSMD5Q16401 504 aa16.7■□□□□ 0.26
LPCAT4-204ENST00000563240 USP49Q70CQ1 688 aa16.7■□□□□ 0.26
LPCAT4-204ENST00000563240 MYCT1Q8N699 235 aa16.7■□□□□ 0.26
LPCAT4-204ENST00000563240 C3orf58Q8NDZ4 430 aa16.7■□□□□ 0.26
LPCAT4-204ENST00000563240 SMG7Q92540 1137 aaKnown RBP16.7■□□□□ 0.26
LPCAT4-204ENST00000563240 RAD54LQ92698 747 aa16.7■□□□□ 0.26
LPCAT4-204ENST00000563240 BICD1Q96G01 975 aa16.7■□□□□ 0.26
LPCAT4-204ENST00000563240 MFSD14AQ96MC6 490 aa16.7■□□□□ 0.26
LPCAT4-204ENST00000563240 ZMAT2Q96NC0 199 aaKnown RBP16.7■□□□□ 0.26
LPCAT4-204ENST00000563240 LARSQ9P2J5 1176 aaKnown RBP16.7■□□□□ 0.26
LPCAT4-204ENST00000563240 DPP7Q9UHL4 492 aa16.7■□□□□ 0.26
LPCAT4-204ENST00000563240 KCNG1Q9UIX4 513 aa16.7■□□□□ 0.26
LPCAT4-204ENST00000563240 ADAM12O43184 909 aa16.69■□□□□ 0.26
LPCAT4-204ENST00000563240 TOM1L1O75674 476 aa16.69■□□□□ 0.26
LPCAT4-204ENST00000563240 FAM13AO94988 1023 aa16.69■□□□□ 0.26
LPCAT4-204ENST00000563240 PROZP22891 400 aa16.69■□□□□ 0.26
LPCAT4-204ENST00000563240 PLA2G5P39877 138 aa16.69■□□□□ 0.26
LPCAT4-204ENST00000563240 BRCC3P46736 316 aa16.69■□□□□ 0.26
LPCAT4-204ENST00000563240 CREMQ03060 361 aa16.69■□□□□ 0.26
LPCAT4-204ENST00000563240 ELAVL2Q12926 359 aaKnown RBP16.69■□□□□ 0.26
LPCAT4-204ENST00000563240 RESTQ13127 1097 aa16.69■□□□□ 0.26
LPCAT4-204ENST00000563240 UPP1Q16831 310 aa16.69■□□□□ 0.26
LPCAT4-204ENST00000563240 LILRA6Q6PI73 481 aa16.69■□□□□ 0.26
LPCAT4-204ENST00000563240 ALKAL1Q6UXT8 129 aa16.69■□□□□ 0.26
LPCAT4-204ENST00000563240 C15orf39Q6ZRI6 1047 aa16.69■□□□□ 0.26
LPCAT4-204ENST00000563240 OTOP3Q7RTS5 596 aa16.69■□□□□ 0.26
LPCAT4-204ENST00000563240 HAUS6Q7Z4H7 955 aa16.69■□□□□ 0.26
LPCAT4-204ENST00000563240 ZDHHC14Q8IZN3 488 aa16.69■□□□□ 0.26
LPCAT4-204ENST00000563240 PLCD3Q8N3E9 789 aa16.69■□□□□ 0.26
LPCAT4-204ENST00000563240 CMASQ8NFW8 434 aaPredicted RBP16.69■□□□□ 0.26
LPCAT4-204ENST00000563240 C18orf25Q96B23 403 aaPredicted RBP16.69■□□□□ 0.26
LPCAT4-204ENST00000563240 ACSF2Q96CM8 615 aaPredicted RBP16.69■□□□□ 0.26
LPCAT4-204ENST00000563240 SNX27Q96L92 541 aa16.69■□□□□ 0.26
LPCAT4-204ENST00000563240 CLSTN3Q9BQT9 956 aa16.69■□□□□ 0.26
LPCAT4-204ENST00000563240 CLDN3O15551 220 aa16.68■□□□□ 0.26
LPCAT4-204ENST00000563240 MEFVO15553 781 aaPredicted RBP16.68■□□□□ 0.26
LPCAT4-204ENST00000563240 SLC26A4O43511 780 aa16.68■□□□□ 0.26
LPCAT4-204ENST00000563240 BRD1O95696 1058 aa16.68■□□□□ 0.26
LPCAT4-204ENST00000563240 GBP2P32456 591 aaPredicted RBP16.68■□□□□ 0.26
LPCAT4-204ENST00000563240 SPAG1Q07617 926 aa16.68■□□□□ 0.26
LPCAT4-204ENST00000563240 MTMR3Q13615 1198 aa16.68■□□□□ 0.26
LPCAT4-204ENST00000563240 NOLC1Q14978 699 aaKnown RBP eCLIP16.68■□□□□ 0.26
LPCAT4-204ENST00000563240 PTPAQ15257 358 aa16.68■□□□□ 0.26
LPCAT4-204ENST00000563240 XKR4Q5GH76 650 aa16.68■□□□□ 0.26
LPCAT4-204ENST00000563240 CD300LGQ6UXG3 332 aa16.68■□□□□ 0.26
LPCAT4-204ENST00000563240 GPR65Q8IYL9 337 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms