RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 FANCGO15287 622 aa19.52■□□□□ 0.71
COMMD4-208ENST00000563220 RFX1P22670 979 aa19.52■□□□□ 0.71
COMMD4-208ENST00000563220 PRKCIP41743 596 aa19.52■□□□□ 0.71
COMMD4-208ENST00000563220 PTK2Q05397 1052 aa19.52■□□□□ 0.71
COMMD4-208ENST00000563220 ZNF571Q7Z3V5 609 aaPredicted RBP19.52■□□□□ 0.71
COMMD4-208ENST00000563220 C7orf31Q8N865 590 aa19.52■□□□□ 0.71
COMMD4-208ENST00000563220 OR5B17Q8NGF7 314 aa19.52■□□□□ 0.71
COMMD4-208ENST00000563220 PDCL3Q9H2J4 239 aa19.52■□□□□ 0.71
COMMD4-208ENST00000563220 PDZD7Q9H5P4 517 aa19.52■□□□□ 0.71
COMMD4-208ENST00000563220 SPC25Q9HBM1 224 aa19.52■□□□□ 0.71
COMMD4-208ENST00000563220 TRIM10Q9UDY6 481 aa19.52■□□□□ 0.71
COMMD4-208ENST00000563220 GINS2Q9Y248 185 aa19.52■□□□□ 0.71
COMMD4-208ENST00000563220 TSPAN1O60635 241 aa19.51■□□□□ 0.71
COMMD4-208ENST00000563220 TUBB4AP04350 444 aa19.51■□□□□ 0.71
COMMD4-208ENST00000563220 OSTNP61366 133 aa19.51■□□□□ 0.71
COMMD4-208ENST00000563220 SPA17Q15506 151 aa19.51■□□□□ 0.71
COMMD4-208ENST00000563220 TMEM192Q8IY95 271 aa19.51■□□□□ 0.71
COMMD4-208ENST00000563220 HELQQ8TDG4 1101 aa19.51■□□□□ 0.71
COMMD4-208ENST00000563220 LACRTQ9GZZ8 138 aa19.51■□□□□ 0.71
COMMD4-208ENST00000563220 XPNPEP3Q9NQH7 507 aa19.51■□□□□ 0.71
COMMD4-208ENST00000563220 DNAI1Q9UI46 699 aa19.51■□□□□ 0.71
COMMD4-208ENST00000563220 PCDHA13Q9Y5I0 950 aa19.51■□□□□ 0.71
COMMD4-208ENST00000563220 RBAK-RBAKDNI3L0D1 243 aa19.5■□□□□ 0.71
COMMD4-208ENST00000563220 EVI5O60447 810 aa19.5■□□□□ 0.71
COMMD4-208ENST00000563220 IPO7O95373 1038 aaKnown RBP19.5■□□□□ 0.71
COMMD4-208ENST00000563220 VNN1O95497 513 aa19.5■□□□□ 0.71
COMMD4-208ENST00000563220 FERP16591 822 aa19.5■□□□□ 0.71
COMMD4-208ENST00000563220 GNG11P61952 73 aa19.5■□□□□ 0.71
COMMD4-208ENST00000563220 CDC42EP1Q00587 391 aa19.5■□□□□ 0.71
COMMD4-208ENST00000563220 ARHGAP29Q52LW3 1261 aa19.5■□□□□ 0.71
COMMD4-208ENST00000563220 MAP3K21Q5TCX8 1036 aa19.5■□□□□ 0.71
COMMD4-208ENST00000563220 SCARA3Q6AZY7 606 aa19.5■□□□□ 0.71
COMMD4-208ENST00000563220 TATDN2Q93075 761 aa19.5■□□□□ 0.71
COMMD4-208ENST00000563220 FAM212AQ96EL1 285 aa19.5■□□□□ 0.71
COMMD4-208ENST00000563220 KREMEN1Q96MU8 473 aa19.5■□□□□ 0.71
COMMD4-208ENST00000563220 WDR24Q96S15 920 aa19.5■□□□□ 0.71
COMMD4-208ENST00000563220 PI4K2AQ9BTU6 479 aa19.5■□□□□ 0.71
COMMD4-208ENST00000563220 GCOM2Q9BZD3 368 aaPredicted RBP19.5■□□□□ 0.71
COMMD4-208ENST00000563220 ADAMTS1Q9UHI8 967 aa19.5■□□□□ 0.71
COMMD4-208ENST00000563220 BZW2Q9Y6E2 419 aaKnown RBP19.5■□□□□ 0.71
COMMD4-208ENST00000563220 KAT6AQ92794 2004 aa19.5■□□□□ 0.71
COMMD4-208ENST00000563220 HMGCRP04035 888 aa19.5■□□□□ 0.71
COMMD4-208ENST00000563220 NBPF20Q3BBV1 942 aa19.5■□□□□ 0.71
COMMD4-208ENST00000563220 ZNF662Q6ZS27 426 aa19.5■□□□□ 0.71
COMMD4-208ENST00000563220 MTERF4Q7Z6M4 381 aaKnown RBP19.5■□□□□ 0.71
COMMD4-208ENST00000563220 KIAA1328Q86T90 577 aa19.5■□□□□ 0.71
COMMD4-208ENST00000563220 KLHDC9Q8NEP7 349 aa19.5■□□□□ 0.71
COMMD4-208ENST00000563220 KIF18AQ8NI77 898 aa19.5■□□□□ 0.71
COMMD4-208ENST00000563220 OSMRQ99650 979 aa19.5■□□□□ 0.71
COMMD4-208ENST00000563220 A0A087X0T9 212 aa19.49■□□□□ 0.71
COMMD4-208ENST00000563220 A0A1B0GUA9 196 aa19.49■□□□□ 0.71
COMMD4-208ENST00000563220 HLA-DRAP01903 254 aa19.49■□□□□ 0.71
COMMD4-208ENST00000563220 FAM228BP0C875 321 aa19.49■□□□□ 0.71
COMMD4-208ENST00000563220 MCF2P10911 925 aa19.49■□□□□ 0.71
COMMD4-208ENST00000563220 GNAT1P11488 350 aa19.49■□□□□ 0.71
COMMD4-208ENST00000563220 VAV2P52735 878 aa19.49■□□□□ 0.71
COMMD4-208ENST00000563220 SLC18A3Q16572 532 aa19.49■□□□□ 0.71
COMMD4-208ENST00000563220 PPM1KQ8N3J5 372 aa19.49■□□□□ 0.71
COMMD4-208ENST00000563220 RAET1EQ8TD07 263 aa19.49■□□□□ 0.71
COMMD4-208ENST00000563220 NT5C1BQ96P26 610 aa19.49■□□□□ 0.71
COMMD4-208ENST00000563220 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.49■□□□□ 0.71
COMMD4-208ENST00000563220 ERLIN2O94905 339 aa19.48■□□□□ 0.71
COMMD4-208ENST00000563220 DARSP14868 501 aaKnown RBP19.48■□□□□ 0.71
COMMD4-208ENST00000563220 BIRC3Q13489 604 aa19.48■□□□□ 0.71
COMMD4-208ENST00000563220 KCNA10Q16322 511 aa19.48■□□□□ 0.71
COMMD4-208ENST00000563220 CCSAPQ6IQ19 270 aaPredicted RBP19.48■□□□□ 0.71
COMMD4-208ENST00000563220 ZNF296Q8WUU4 475 aaPredicted RBP19.48■□□□□ 0.71
COMMD4-208ENST00000563220 JAKMIP2Q96AA8 810 aa19.48■□□□□ 0.71
COMMD4-208ENST00000563220 IFIH1Q9BYX4 1025 aaKnown RBP19.48■□□□□ 0.71
COMMD4-208ENST00000563220 GUCA1BQ9UMX6 200 aa19.48■□□□□ 0.71
COMMD4-208ENST00000563220 PAXBP1Q9Y5B6 917 aa19.48■□□□□ 0.71
COMMD4-208ENST00000563220 DUSP10Q9Y6W6 482 aa19.48■□□□□ 0.71
COMMD4-208ENST00000563220 MEFVO15553 781 aaPredicted RBP19.48■□□□□ 0.71
COMMD4-208ENST00000563220 ASGR1P07306 291 aa19.48■□□□□ 0.71
COMMD4-208ENST00000563220 STAG3L1P0CL83 205 aa19.48■□□□□ 0.71
COMMD4-208ENST00000563220 HOXA11P31270 313 aaPredicted RBP19.48■□□□□ 0.71
COMMD4-208ENST00000563220 MAGEA1P43355 309 aa19.48■□□□□ 0.71
COMMD4-208ENST00000563220 CCDC122Q5T0U0 273 aa19.48■□□□□ 0.71
COMMD4-208ENST00000563220 WDR49Q8IV35 697 aa19.48■□□□□ 0.71
COMMD4-208ENST00000563220 OLIG1Q8TAK6 271 aa19.48■□□□□ 0.71
COMMD4-208ENST00000563220 PXYLP1Q8TE99 480 aa19.48■□□□□ 0.71
COMMD4-208ENST00000563220 VTI1AQ96AJ9 217 aa19.48■□□□□ 0.71
COMMD4-208ENST00000563220 GTF2IRD1Q9UHL9 959 aa19.48■□□□□ 0.71
COMMD4-208ENST00000563220 CASP8AP2Q9UKL3 1982 aa19.47■□□□□ 0.71
COMMD4-208ENST00000563220 FKTNO75072 461 aa19.47■□□□□ 0.71
COMMD4-208ENST00000563220 ZC3H11AO75152 810 aaKnown RBP eCLIP19.47■□□□□ 0.71
COMMD4-208ENST00000563220 GNRH1P01148 92 aa19.47■□□□□ 0.71
COMMD4-208ENST00000563220 MYCNP04198 464 aaPredicted RBP19.47■□□□□ 0.71
COMMD4-208ENST00000563220 CXCL8P10145 99 aa19.47■□□□□ 0.71
COMMD4-208ENST00000563220 MFAP3P55082 362 aa19.47■□□□□ 0.71
COMMD4-208ENST00000563220 TMEM40Q8WWA1 233 aa19.47■□□□□ 0.71
COMMD4-208ENST00000563220 ERO1AQ96HE7 468 aa19.47■□□□□ 0.71
COMMD4-208ENST00000563220 RPF1Q9H9Y2 349 aaKnown RBP19.47■□□□□ 0.71
COMMD4-208ENST00000563220 KIF5CO60282 957 aa19.46■□□□□ 0.71
COMMD4-208ENST00000563220 CST3P01034 146 aaPredicted RBP19.46■□□□□ 0.71
COMMD4-208ENST00000563220 EIF4BP23588 611 aaKnown RBP19.46■□□□□ 0.71
COMMD4-208ENST00000563220 PIK3CAP42336 1068 aa19.46■□□□□ 0.71
COMMD4-208ENST00000563220 SURF1Q15526 300 aa19.46■□□□□ 0.71
COMMD4-208ENST00000563220 ZNF569Q5MCW4 686 aa19.46■□□□□ 0.71
COMMD4-208ENST00000563220 SPOPLQ6IQ16 392 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms