RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 CHPFQ8IZ52 775 aa4.23□□□□□ -1.73
SHCBP1-202ENST00000563219 PRR18Q8N4B5 295 aa4.23□□□□□ -1.73
SHCBP1-202ENST00000563219 OR7D4Q8NG98 312 aa4.23□□□□□ -1.73
SHCBP1-202ENST00000563219 ZNF483Q8TF39 744 aaPredicted RBP4.23□□□□□ -1.73
SHCBP1-202ENST00000563219 LARP4BQ92615 738 aaKnown RBP4.23□□□□□ -1.73
SHCBP1-202ENST00000563219 MIEF2Q96C03 454 aa4.23□□□□□ -1.73
SHCBP1-202ENST00000563219 AIFM3Q96NN9 605 aa4.23□□□□□ -1.73
SHCBP1-202ENST00000563219 C11orf21Q9P2W6 132 aa4.23□□□□□ -1.73
SHCBP1-202ENST00000563219 CCDC194A0A1B0GVG4 234 aa4.22□□□□□ -1.73
SHCBP1-202ENST00000563219 UBE2QL1A1L167 161 aa4.22□□□□□ -1.73
SHCBP1-202ENST00000563219 CCDC154A6NI56 674 aa4.22□□□□□ -1.73
SHCBP1-202ENST00000563219 PRC1O43663 620 aa4.22□□□□□ -1.73
SHCBP1-202ENST00000563219 SGTAO43765 313 aa4.22□□□□□ -1.73
SHCBP1-202ENST00000563219 ADH4P08319 380 aa4.22□□□□□ -1.73
SHCBP1-202ENST00000563219 CT47B1P0C2W7 299 aaPredicted RBP4.22□□□□□ -1.73
SHCBP1-202ENST00000563219 ADSLP30566 484 aaPredicted RBP4.22□□□□□ -1.73
SHCBP1-202ENST00000563219 SCNN1GP51170 649 aa4.22□□□□□ -1.73
SHCBP1-202ENST00000563219 NPEPPSP55786 919 aa4.22□□□□□ -1.73
SHCBP1-202ENST00000563219 CRHR2Q13324 411 aa4.22□□□□□ -1.73
SHCBP1-202ENST00000563219 MRPL49Q13405 166 aaKnown RBP4.22□□□□□ -1.73
SHCBP1-202ENST00000563219 GTF2H3Q13889 308 aa4.22□□□□□ -1.73
SHCBP1-202ENST00000563219 SMN1Q16637 294 aaKnown RBP4.22□□□□□ -1.73
SHCBP1-202ENST00000563219 UAP1L1Q3KQV9 507 aa4.22□□□□□ -1.73
SHCBP1-202ENST00000563219 FAM111BQ6SJ93 734 aa4.22□□□□□ -1.73
SHCBP1-202ENST00000563219 MIGA2Q7L4E1 593 aa4.22□□□□□ -1.73
SHCBP1-202ENST00000563219 GSPT2Q8IYD1 628 aaKnown RBP4.22□□□□□ -1.73
SHCBP1-202ENST00000563219 DPF2Q92785 391 aa4.22□□□□□ -1.73
SHCBP1-202ENST00000563219 HDAC10Q969S8 669 aa4.22□□□□□ -1.73
SHCBP1-202ENST00000563219 CYFIP2Q96F07 1278 aa4.22□□□□□ -1.73
SHCBP1-202ENST00000563219 C7orf25Q9BPX7 421 aa4.22□□□□□ -1.73
SHCBP1-202ENST00000563219 TCF25Q9BQ70 676 aa4.22□□□□□ -1.73
SHCBP1-202ENST00000563219 SLC2A4RGQ9NR83 387 aa4.22□□□□□ -1.73
SHCBP1-202ENST00000563219 RCAN3Q9UKA8 241 aa4.22□□□□□ -1.73
SHCBP1-202ENST00000563219 INTUQ9ULD6 942 aa4.22□□□□□ -1.73
SHCBP1-202ENST00000563219 SIK3Q9Y2K2 1263 aa4.22□□□□□ -1.73
SHCBP1-202ENST00000563219 CFAP20Q9Y6A4 193 aaKnown RBP4.22□□□□□ -1.73
SHCBP1-202ENST00000563219 A0A087X1B8 175 aa4.21□□□□□ -1.74
SHCBP1-202ENST00000563219 PRPF3O43395 683 aaKnown RBP4.21□□□□□ -1.74
SHCBP1-202ENST00000563219 PDCP20941 246 aa4.21□□□□□ -1.74
SHCBP1-202ENST00000563219 LPOP22079 712 aaPredicted RBP4.21□□□□□ -1.74
SHCBP1-202ENST00000563219 GUCY1A2P33402 732 aa4.21□□□□□ -1.74
SHCBP1-202ENST00000563219 CASRP41180 1078 aa4.21□□□□□ -1.74
SHCBP1-202ENST00000563219 GZMKP49863 264 aa4.21□□□□□ -1.74
SHCBP1-202ENST00000563219 INHBEP58166 350 aa4.21□□□□□ -1.74
SHCBP1-202ENST00000563219 C3orf36Q3SXR2 165 aa4.21□□□□□ -1.74
SHCBP1-202ENST00000563219 ATAT1Q5SQI0 421 aa4.21□□□□□ -1.74
SHCBP1-202ENST00000563219 USP45Q70EL2 814 aa4.21□□□□□ -1.74
SHCBP1-202ENST00000563219 PDZD4Q76G19 769 aaPredicted RBP4.21□□□□□ -1.74
SHCBP1-202ENST00000563219 LDLRAD3Q86YD5 345 aa4.21□□□□□ -1.74
SHCBP1-202ENST00000563219 TPH2Q8IWU9 490 aa4.21□□□□□ -1.74
SHCBP1-202ENST00000563219 ULK2Q8IYT8 1036 aa4.21□□□□□ -1.74
SHCBP1-202ENST00000563219 TRMT2AQ8IZ69 625 aaKnown RBP4.21□□□□□ -1.74
SHCBP1-202ENST00000563219 MAGEB6Q8N7X4 407 aa4.21□□□□□ -1.74
SHCBP1-202ENST00000563219 CASKIN2Q8WXE0 1202 aa4.21□□□□□ -1.74
SHCBP1-202ENST00000563219 CLIP3Q96DZ5 547 aa4.21□□□□□ -1.74
SHCBP1-202ENST00000563219 IL17RAQ96F46 866 aa4.21□□□□□ -1.74
SHCBP1-202ENST00000563219 CDC5LQ99459 802 aaKnown RBP4.21□□□□□ -1.74
SHCBP1-202ENST00000563219 SLC12A5Q9H2X9 1139 aa4.21□□□□□ -1.74
SHCBP1-202ENST00000563219 MANSC1Q9H8J5 431 aa4.21□□□□□ -1.74
SHCBP1-202ENST00000563219 LANCL2Q9NS86 450 aa4.21□□□□□ -1.74
SHCBP1-202ENST00000563219 XDHP47989 1333 aa4.21□□□□□ -1.74
SHCBP1-202ENST00000563219 ATRNL1Q5VV63 1379 aa4.2□□□□□ -1.74
SHCBP1-202ENST00000563219 ADCY6O43306 1168 aa4.2□□□□□ -1.74
SHCBP1-202ENST00000563219 DTNBO60941 627 aa4.2□□□□□ -1.74
SHCBP1-202ENST00000563219 HSPA6P17066 643 aa4.2□□□□□ -1.74
SHCBP1-202ENST00000563219 MAN2A2P49641 1150 aa4.2□□□□□ -1.74
SHCBP1-202ENST00000563219 SLC25A3Q00325 362 aa4.2□□□□□ -1.74
SHCBP1-202ENST00000563219 CDC42EP1Q00587 391 aa4.2□□□□□ -1.74
SHCBP1-202ENST00000563219 SP140Q13342 867 aa4.2□□□□□ -1.74
SHCBP1-202ENST00000563219 CNGB1Q14028 1251 aaPredicted RBP4.2□□□□□ -1.74
SHCBP1-202ENST00000563219 ELAVL1Q15717 326 aaKnown RBP4.2□□□□□ -1.74
SHCBP1-202ENST00000563219 PRAMEF14Q5SWL7 426 aa4.2□□□□□ -1.74
SHCBP1-202ENST00000563219 PPP4R3AQ6IN85 833 aa4.2□□□□□ -1.74
SHCBP1-202ENST00000563219 MFSD5Q6N075 450 aa4.2□□□□□ -1.74
SHCBP1-202ENST00000563219 SLC4A10Q6U841 1118 aa4.2□□□□□ -1.74
SHCBP1-202ENST00000563219 B3GNT9Q6UX72 402 aa4.2□□□□□ -1.74
SHCBP1-202ENST00000563219 Q6ZRM9 215 aa4.2□□□□□ -1.74
SHCBP1-202ENST00000563219 EPM2AIP1Q7L775 607 aaPredicted RBP4.2□□□□□ -1.74
SHCBP1-202ENST00000563219 ZNF627Q7L945 461 aa4.2□□□□□ -1.74
SHCBP1-202ENST00000563219 ZNF572Q7Z3I7 529 aaPredicted RBP4.2□□□□□ -1.74
SHCBP1-202ENST00000563219 MYO1HQ8N1T3 1032 aa4.2□□□□□ -1.74
SHCBP1-202ENST00000563219 PQLC1Q8N2U9 271 aa4.2□□□□□ -1.74
SHCBP1-202ENST00000563219 OR5M3Q8NGP4 307 aa4.2□□□□□ -1.74
SHCBP1-202ENST00000563219 NSUN6Q8TEA1 469 aaKnown RBP4.2□□□□□ -1.74
SHCBP1-202ENST00000563219 HPS3Q969F9 1004 aa4.2□□□□□ -1.74
SHCBP1-202ENST00000563219 LRGUKQ96M69 825 aa4.2□□□□□ -1.74
SHCBP1-202ENST00000563219 PRRX2Q99811 253 aa4.2□□□□□ -1.74
SHCBP1-202ENST00000563219 PDCD2LQ9BRP1 358 aa4.2□□□□□ -1.74
SHCBP1-202ENST00000563219 GTPBP4Q9BZE4 634 aaKnown RBP4.2□□□□□ -1.74
SHCBP1-202ENST00000563219 NMRK2Q9NPI5 230 aa4.2□□□□□ -1.74
SHCBP1-202ENST00000563219 NCDNQ9UBB6 729 aa4.2□□□□□ -1.74
SHCBP1-202ENST00000563219 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.2□□□□□ -1.74
SHCBP1-202ENST00000563219 REXO2Q9Y3B8 237 aaKnown RBP4.2□□□□□ -1.74
SHCBP1-202ENST00000563219 HOXA3O43365 443 aaPredicted RBP4.19□□□□□ -1.74
SHCBP1-202ENST00000563219 OFD1O75665 1012 aa4.19□□□□□ -1.74
SHCBP1-202ENST00000563219 RPLP2P05387 115 aaKnown RBP4.19□□□□□ -1.74
SHCBP1-202ENST00000563219 IL2RBP14784 551 aa4.19□□□□□ -1.74
SHCBP1-202ENST00000563219 ALOX15P16050 662 aaPredicted RBP4.19□□□□□ -1.74
SHCBP1-202ENST00000563219 FLT3LGP49771 235 aa4.19□□□□□ -1.74
SHCBP1-202ENST00000563219 PER3P56645 1201 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms