RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 LRRC34Q8IZ02 419 aa14□□□□□ -0.17
USB1-207ENST00000563149 TMEM161BQ8NDZ6 487 aa14□□□□□ -0.17
USB1-207ENST00000563149 ZSWIM2Q8NEG5 633 aa14□□□□□ -0.17
USB1-207ENST00000563149 DHX38Q92620 1227 aaKnown RBP14□□□□□ -0.17
USB1-207ENST00000563149 TCEAL9Q9UHQ7 104 aa14□□□□□ -0.17
USB1-207ENST00000563149 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14□□□□□ -0.17
USB1-207ENST00000563149 CLRN2A0PK11 232 aa13.99□□□□□ -0.17
USB1-207ENST00000563149 GOLGA8IPA6NC78 632 aa13.99□□□□□ -0.17
USB1-207ENST00000563149 GOLGA8JA6NMD2 632 aa13.99□□□□□ -0.17
USB1-207ENST00000563149 ANKRD63C9JTQ0 380 aa13.99□□□□□ -0.17
USB1-207ENST00000563149 BACH1O14867 736 aa13.99□□□□□ -0.17
USB1-207ENST00000563149 WDR46O15213 610 aaKnown RBP13.99□□□□□ -0.17
USB1-207ENST00000563149 ATMINO43313 823 aaPredicted RBP13.99□□□□□ -0.17
USB1-207ENST00000563149 GRIN3BO60391 1043 aa13.99□□□□□ -0.17
USB1-207ENST00000563149 DKC1O60832 514 aaKnown RBP eCLIP13.99□□□□□ -0.171e-5■■■■□ 25.7
USB1-207ENST00000563149 TCEA3O75764 348 aa13.99□□□□□ -0.17
USB1-207ENST00000563149 ADSSP30520 456 aa13.99□□□□□ -0.17
USB1-207ENST00000563149 MAPK4P31152 587 aa13.99□□□□□ -0.17
USB1-207ENST00000563149 BPIFB4P59827 614 aa13.99□□□□□ -0.17
USB1-207ENST00000563149 CENPCQ03188 943 aa13.99□□□□□ -0.17
USB1-207ENST00000563149 KRT17Q04695 432 aa13.99□□□□□ -0.17
USB1-207ENST00000563149 DMP1Q13316 513 aaPredicted RBP13.99□□□□□ -0.17
USB1-207ENST00000563149 ZYXQ15942 572 aaKnown RBP13.99□□□□□ -0.17
USB1-207ENST00000563149 XKR9Q5GH70 373 aa13.99□□□□□ -0.17
USB1-207ENST00000563149 FAM102BQ5T8I3 360 aa13.99□□□□□ -0.17
USB1-207ENST00000563149 EXOC3L1Q86VI1 746 aa13.99□□□□□ -0.17
USB1-207ENST00000563149 BBOF1Q8ND07 529 aa13.99□□□□□ -0.17
USB1-207ENST00000563149 IL31RAQ8NI17 732 aa13.99□□□□□ -0.17
USB1-207ENST00000563149 SYTL5Q8TDW5 730 aaPredicted RBP13.99□□□□□ -0.17
USB1-207ENST00000563149 EPS8L3Q8TE67 593 aaKnown RBP13.99□□□□□ -0.17
USB1-207ENST00000563149 SNF8Q96H20 258 aa13.99□□□□□ -0.17
USB1-207ENST00000563149 PRMT1Q99873 361 aaKnown RBP13.99□□□□□ -0.17
USB1-207ENST00000563149 NCAPGQ9BPX3 1015 aa13.99□□□□□ -0.17
USB1-207ENST00000563149 CDC42EP4Q9H3Q1 356 aaKnown RBP13.99□□□□□ -0.17
USB1-207ENST00000563149 PKD2L1Q9P0L9 805 aa13.99□□□□□ -0.17
USB1-207ENST00000563149 PTPN22Q9Y2R2 807 aa13.99□□□□□ -0.17
USB1-207ENST00000563149 BRWD3Q6RI45 1802 aa13.99□□□□□ -0.17
USB1-207ENST00000563149 NFIBO00712 420 aa13.99□□□□□ -0.17
USB1-207ENST00000563149 GAS8O95995 478 aa13.99□□□□□ -0.17
USB1-207ENST00000563149 UNGP13051 313 aaPredicted RBP13.99□□□□□ -0.17
USB1-207ENST00000563149 GARTP22102 1010 aa13.99□□□□□ -0.17
USB1-207ENST00000563149 NPTX2P47972 431 aa13.99□□□□□ -0.17
USB1-207ENST00000563149 KCNJ1P48048 391 aa13.99□□□□□ -0.17
USB1-207ENST00000563149 CYP24A1Q07973 514 aa13.99□□□□□ -0.17
USB1-207ENST00000563149 KCTD19Q17RG1 926 aaPredicted RBP13.99□□□□□ -0.17
USB1-207ENST00000563149 XRRA1Q6P2D8 792 aa13.99□□□□□ -0.17
USB1-207ENST00000563149 CEP128Q6ZU80 1094 aa13.99□□□□□ -0.17
USB1-207ENST00000563149 OTUD6AQ7L8S5 288 aa13.99□□□□□ -0.17
USB1-207ENST00000563149 OGFOD1Q8N543 542 aa13.99□□□□□ -0.17
USB1-207ENST00000563149 MTMR14Q8NCE2 650 aa13.99□□□□□ -0.17
USB1-207ENST00000563149 LPAR1Q92633 364 aa13.99□□□□□ -0.17
USB1-207ENST00000563149 BTBD6Q96KE9 485 aa13.99□□□□□ -0.17
USB1-207ENST00000563149 GMLQ99445 158 aa13.99□□□□□ -0.17
USB1-207ENST00000563149 SENP7Q9BQF6 1050 aa13.99□□□□□ -0.17
USB1-207ENST00000563149 PLCD4Q9BRC7 762 aa13.99□□□□□ -0.17
USB1-207ENST00000563149 KMT5AQ9NQR1 393 aa13.99□□□□□ -0.17
USB1-207ENST00000563149 BCS1LQ9Y276 419 aa13.99□□□□□ -0.17
USB1-207ENST00000563149 CFAP73A6NFT4 308 aa13.98□□□□□ -0.17
USB1-207ENST00000563149 SMIM23A6NLE4 172 aa13.98□□□□□ -0.17
USB1-207ENST00000563149 CLDN3O15551 220 aa13.98□□□□□ -0.17
USB1-207ENST00000563149 MGRN1O60291 552 aa13.98□□□□□ -0.17
USB1-207ENST00000563149 SORBS3O60504 671 aa13.98□□□□□ -0.17
USB1-207ENST00000563149 VIMP08670 466 aaKnown RBP13.98□□□□□ -0.17
USB1-207ENST00000563149 SCP2P22307 547 aa13.98□□□□□ -0.17
USB1-207ENST00000563149 SPP2Q13103 211 aa13.98□□□□□ -0.17
USB1-207ENST00000563149 PGM5Q15124 567 aa13.98□□□□□ -0.17
USB1-207ENST00000563149 SPRED3Q2MJR0 410 aa13.98□□□□□ -0.17
USB1-207ENST00000563149 PPP1R2P3Q6NXS1 205 aa13.98□□□□□ -0.17
USB1-207ENST00000563149 MCOLN2Q8IZK6 566 aa13.98□□□□□ -0.17
USB1-207ENST00000563149 GPD1LQ8N335 351 aa13.98□□□□□ -0.17
USB1-207ENST00000563149 ATL2Q8NHH9 583 aa13.98□□□□□ -0.17
USB1-207ENST00000563149 ZKSCAN4Q969J2 545 aaPredicted RBP13.98□□□□□ -0.17
USB1-207ENST00000563149 KIAA1586Q9HCI6 787 aa13.98□□□□□ -0.17
USB1-207ENST00000563149 HAUS2Q9NVX0 235 aa13.98□□□□□ -0.17
USB1-207ENST00000563149 ZNF219Q9P2Y4 722 aaPredicted RBP13.98□□□□□ -0.17
USB1-207ENST00000563149 ASIC3Q9UHC3 531 aa13.98□□□□□ -0.17
USB1-207ENST00000563149 CHORDC1Q9UHD1 332 aaPredicted RBP13.98□□□□□ -0.17
USB1-207ENST00000563149 KCNG1Q9UIX4 513 aa13.98□□□□□ -0.17
USB1-207ENST00000563149 ANAPC7Q9UJX3 599 aa13.98□□□□□ -0.17
USB1-207ENST00000563149 SLC12A4Q9UP95 1085 aa13.98□□□□□ -0.17
USB1-207ENST00000563149 DENND3A2RUS2 1198 aa13.97□□□□□ -0.17
USB1-207ENST00000563149 H0YCG3 227 aa13.97□□□□□ -0.17
USB1-207ENST00000563149 TTC4O95801 387 aa13.97□□□□□ -0.17
USB1-207ENST00000563149 DLATP10515 647 aaKnown RBP13.97□□□□□ -0.17
USB1-207ENST00000563149 IVDP26440 423 aa13.97□□□□□ -0.17
USB1-207ENST00000563149 SLC8A1P32418 973 aa13.97□□□□□ -0.17
USB1-207ENST00000563149 RTP1P59025 263 aa13.97□□□□□ -0.17
USB1-207ENST00000563149 UGCGQ16739 394 aa13.97□□□□□ -0.17
USB1-207ENST00000563149 PREPLQ4J6C6 727 aaPredicted RBP13.97□□□□□ -0.17
USB1-207ENST00000563149 WLSQ5T9L3 541 aa13.97□□□□□ -0.17
USB1-207ENST00000563149 SAMD1Q6SPF0 538 aaPredicted RBP13.97□□□□□ -0.17
USB1-207ENST00000563149 SV2AQ7L0J3 742 aa13.97□□□□□ -0.17
USB1-207ENST00000563149 TRPM8Q7Z2W7 1104 aa13.97□□□□□ -0.17
USB1-207ENST00000563149 CCDC25Q86WR0 208 aa13.97□□□□□ -0.17
USB1-207ENST00000563149 TAS1R2Q8TE23 839 aa13.97□□□□□ -0.17
USB1-207ENST00000563149 ARHGEF2Q92974 986 aaKnown RBP13.97□□□□□ -0.17
USB1-207ENST00000563149 CCDC127Q96BQ5 260 aa13.97□□□□□ -0.17
USB1-207ENST00000563149 SAAL1Q96ER3 474 aa13.97□□□□□ -0.17
USB1-207ENST00000563149 ELAC2Q9BQ52 826 aaKnown RBP13.97□□□□□ -0.17
USB1-207ENST00000563149 JPH2Q9BR39 696 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms