RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, human

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKLF-208	ENST00000563092	KCNMB3	Q9NPA1	279 aa		9.28	□□□□□ -0.92
CKLF-208	ENST00000563092	AVEN	Q9NQS1	362 aa	Predicted RBP	9.28	□□□□□ -0.92
CKLF-208	ENST00000563092	KCNH3	Q9ULD8	1083 aa		9.28	□□□□□ -0.92
CKLF-208	ENST00000563092	HES2	Q9Y543	173 aa		9.28	□□□□□ -0.92
CKLF-208	ENST00000563092	NOTCH4	Q99466	2003 aa		9.27	□□□□□ -0.92
CKLF-208	ENST00000563092	NR1I2	O75469	434 aa		9.27	□□□□□ -0.93
CKLF-208	ENST00000563092	P4HB	P07237	508 aa	Known RBP	9.27	□□□□□ -0.93
CKLF-208	ENST00000563092	C8A	P07357	584 aa		9.27	□□□□□ -0.93
CKLF-208	ENST00000563092	HMGB1	P09429	215 aa	Known RBP	9.27	□□□□□ -0.93
CKLF-208	ENST00000563092	IFNAR1	P17181	557 aa		9.27	□□□□□ -0.93
CKLF-208	ENST00000563092	CD72	P21854	359 aa		9.27	□□□□□ -0.93
CKLF-208	ENST00000563092	EVC	P57679	992 aa		9.27	□□□□□ -0.93
CKLF-208	ENST00000563092	MBTD1	Q05BQ5	628 aa		9.27	□□□□□ -0.93
CKLF-208	ENST00000563092	GRIK3	Q13003	919 aa		9.27	□□□□□ -0.93
CKLF-208	ENST00000563092	MTAP	Q13126	283 aa		9.27	□□□□□ -0.93
CKLF-208	ENST00000563092	NAB2	Q15742	525 aa		9.27	□□□□□ -0.93
CKLF-208	ENST00000563092	UVSSA	Q2YD98	709 aa		9.27	□□□□□ -0.93
CKLF-208	ENST00000563092	NOTUM	Q6P988	496 aa		9.27	□□□□□ -0.93
CKLF-208	ENST00000563092	TSSK4	Q6SA08	328 aa		9.27	□□□□□ -0.93
CKLF-208	ENST00000563092	PRSS55	Q6UWB4	352 aa	Predicted RBP	9.27	□□□□□ -0.93
CKLF-208	ENST00000563092	C4orf19	Q8IY42	314 aa		9.27	□□□□□ -0.93
CKLF-208	ENST00000563092	RNF149	Q8NC42	400 aa		9.27	□□□□□ -0.93
CKLF-208	ENST00000563092	DAGLB	Q8NCG7	672 aa		9.27	□□□□□ -0.93
CKLF-208	ENST00000563092	NETO1	Q8TDF5	533 aa		9.27	□□□□□ -0.93
CKLF-208	ENST00000563092	TCP11	Q8WWU5	503 aa		9.27	□□□□□ -0.93
CKLF-208	ENST00000563092	DNASE1L2	Q92874	299 aa		9.27	□□□□□ -0.93
CKLF-208	ENST00000563092	CEP170P1	Q96L14	293 aa		9.27	□□□□□ -0.93
CKLF-208	ENST00000563092	PAAF1	Q9BRP4	392 aa		9.27	□□□□□ -0.93
CKLF-208	ENST00000563092	IER2	Q9BTL4	223 aa		9.27	□□□□□ -0.93
CKLF-208	ENST00000563092	PHF20	Q9BVI0	1012 aa		9.27	□□□□□ -0.93
CKLF-208	ENST00000563092	C22orf23	Q9BZE7	217 aa		9.27	□□□□□ -0.93
CKLF-208	ENST00000563092	CHRD	Q9H2X0	955 aa		9.27	□□□□□ -0.93
CKLF-208	ENST00000563092	NXF3	Q9H4D5	531 aa	Known RBP	9.27	□□□□□ -0.93
CKLF-208	ENST00000563092	ANO2	Q9NQ90	1003 aa		9.27	□□□□□ -0.93
CKLF-208	ENST00000563092	XPNPEP1	Q9NQW7	623 aa		9.27	□□□□□ -0.93
CKLF-208	ENST00000563092	VPS54	Q9P1Q0	977 aa		9.27	□□□□□ -0.93
CKLF-208	ENST00000563092	SF3B1	O75533	1304 aa	Known RBP eCLIP	9.27	□□□□□ -0.93
CKLF-208	ENST00000563092	COL4A2	P08572	1712 aa		9.26	□□□□□ -0.93
CKLF-208	ENST00000563092		A0A1B0GUA9	196 aa		9.26	□□□□□ -0.93
CKLF-208	ENST00000563092	NCAM2	O15394	837 aa		9.26	□□□□□ -0.93
CKLF-208	ENST00000563092	ADAM12	O43184	909 aa		9.26	□□□□□ -0.93
CKLF-208	ENST00000563092	SLC37A4	O43826	429 aa		9.26	□□□□□ -0.93
CKLF-208	ENST00000563092	DKC1	O60832	514 aa	Known RBP eCLIP	9.26	□□□□□ -0.93
CKLF-208	ENST00000563092	ERLIN2	O94905	339 aa		9.26	□□□□□ -0.93
CKLF-208	ENST00000563092	RET	P07949	1114 aa		9.26	□□□□□ -0.93
CKLF-208	ENST00000563092	ARF4	P18085	180 aa	Predicted RBP	9.26	□□□□□ -0.93
CKLF-208	ENST00000563092	FCAR	P24071	287 aa		9.26	□□□□□ -0.93
CKLF-208	ENST00000563092	ADCY1	Q08828	1119 aa		9.26	□□□□□ -0.93
CKLF-208	ENST00000563092	RAB33A	Q14088	237 aa		9.26	□□□□□ -0.93
CKLF-208	ENST00000563092	KRT32	Q14532	448 aa		9.26	□□□□□ -0.93
CKLF-208	ENST00000563092	HSP90AA2P	Q14568	343 aa	Predicted RBP	9.26	□□□□□ -0.93
CKLF-208	ENST00000563092	MXD4	Q14582	209 aa	Predicted RBP	9.26	□□□□□ -0.93
CKLF-208	ENST00000563092	EMC2	Q15006	297 aa		9.26	□□□□□ -0.93
CKLF-208	ENST00000563092	LAIR1	Q6GTX8	287 aa		9.26	□□□□□ -0.93
CKLF-208	ENST00000563092	ZNF852	Q6ZMS4	543 aa		9.26	□□□□□ -0.93
CKLF-208	ENST00000563092	GLYCTK	Q8IVS8	523 aa		9.26	□□□□□ -0.93
CKLF-208	ENST00000563092	FAM177A1	Q8N128	213 aa	Predicted RBP	9.26	□□□□□ -0.93
CKLF-208	ENST00000563092	CELF5	Q8N6W0	485 aa	Known RBP	9.26	□□□□□ -0.93
CKLF-208	ENST00000563092	CPB2	Q96IY4	423 aa		9.26	□□□□□ -0.93
CKLF-208	ENST00000563092	FAM20A	Q96MK3	541 aa		9.26	□□□□□ -0.93
CKLF-208	ENST00000563092	KXD1	Q9BQD3	176 aa		9.26	□□□□□ -0.93
CKLF-208	ENST00000563092	TTPAL	Q9BTX7	342 aa		9.26	□□□□□ -0.93
CKLF-208	ENST00000563092	PLA2G2F	Q9BZM2	168 aa		9.26	□□□□□ -0.93
CKLF-208	ENST00000563092	TRPV5	Q9NQA5	729 aa		9.26	□□□□□ -0.93
CKLF-208	ENST00000563092	HCFC1R1	Q9NWW0	138 aa		9.26	□□□□□ -0.93
CKLF-208	ENST00000563092	GDE1	Q9NZC3	331 aa		9.26	□□□□□ -0.93
CKLF-208	ENST00000563092	DNMT3B	Q9UBC3	853 aa	Known RBP	9.26	□□□□□ -0.93
CKLF-208	ENST00000563092	PCDHA4	Q9UN74	947 aa		9.26	□□□□□ -0.93
CKLF-208	ENST00000563092	ZZEF1	O43149	2961 aa		9.26	□□□□□ -0.93
CKLF-208	ENST00000563092	FRY	Q5TBA9	3013 aa		9.26	□□□□□ -0.93
CKLF-208	ENST00000563092	DOCK6	Q96HP0	2047 aa		9.26	□□□□□ -0.93
CKLF-208	ENST00000563092	SPEG	Q15772	3267 aa		9.25	□□□□□ -0.93
CKLF-208	ENST00000563092	ASPM	Q8IZT6	3477 aa		9.25	□□□□□ -0.93
CKLF-208	ENST00000563092	CEP295	Q9C0D2	2601 aa		9.25	□□□□□ -0.93
CKLF-208	ENST00000563092	PTGES	O14684	152 aa		9.25	□□□□□ -0.93
CKLF-208	ENST00000563092	TM4SF5	O14894	197 aa		9.25	□□□□□ -0.93
CKLF-208	ENST00000563092	CCL16	O15467	120 aa		9.25	□□□□□ -0.93
CKLF-208	ENST00000563092	XYLB	O75191	536 aa		9.25	□□□□□ -0.93
CKLF-208	ENST00000563092	YWHAB	P31946	246 aa	Known RBP	9.25	□□□□□ -0.93
CKLF-208	ENST00000563092	NRL	P54845	237 aa		9.25	□□□□□ -0.93
CKLF-208	ENST00000563092	SHC2	P98077	582 aa		9.25	□□□□□ -0.93
CKLF-208	ENST00000563092	SPIRE1	Q08AE8	756 aa		9.25	□□□□□ -0.93
CKLF-208	ENST00000563092	TUSC3	Q13454	348 aa		9.25	□□□□□ -0.93
CKLF-208	ENST00000563092	PSMD5	Q16401	504 aa		9.25	□□□□□ -0.93
CKLF-208	ENST00000563092	CSRP2	Q16527	193 aa		9.25	□□□□□ -0.93
CKLF-208	ENST00000563092	SLC5A9	Q2M3M2	681 aa		9.25	□□□□□ -0.93
CKLF-208	ENST00000563092	PPM1J	Q5JR12	505 aa		9.25	□□□□□ -0.93
CKLF-208	ENST00000563092	PPM1L	Q5SGD2	360 aa		9.25	□□□□□ -0.93
CKLF-208	ENST00000563092	LIN9	Q5TKA1	542 aa		9.25	□□□□□ -0.93
CKLF-208	ENST00000563092	PPP4R3A	Q6IN85	833 aa		9.25	□□□□□ -0.93
CKLF-208	ENST00000563092	TPRG1	Q6ZUI0	275 aa		9.25	□□□□□ -0.93
CKLF-208	ENST00000563092	HAS1	Q92839	578 aa		9.25	□□□□□ -0.93
CKLF-208	ENST00000563092	ELSPBP1	Q96BH3	223 aa		9.25	□□□□□ -0.93
CKLF-208	ENST00000563092	CACNG4	Q9UBN1	327 aa		9.25	□□□□□ -0.93
CKLF-208	ENST00000563092	GMEB2	Q9UKD1	530 aa		9.25	□□□□□ -0.93
CKLF-208	ENST00000563092	USP18	Q9UMW8	372 aa		9.25	□□□□□ -0.93
CKLF-208	ENST00000563092	MRPS17	Q9Y2R5	130 aa	Known RBP	9.25	□□□□□ -0.93
CKLF-208	ENST00000563092	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	9.25	□□□□□ -0.93
CKLF-208	ENST00000563092	BAHCC1	Q9P281	2608 aa		9.24	□□□□□ -0.93
CKLF-208	ENST00000563092	GOLGA8CP	A6NN73	597 aa		9.24	□□□□□ -0.93

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