RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.81■□□□□ 0.44
USB1-206ENST00000562534 RANBP2P49792 3224 aaKnown RBP17.81■□□□□ 0.44
USB1-206ENST00000562534 LACTBL1A8MY62 500 aa17.8■□□□□ 0.44
USB1-206ENST00000562534 PSMA7O14818 248 aa17.8■□□□□ 0.44
USB1-206ENST00000562534 DDHD2O94830 711 aa17.8■□□□□ 0.44
USB1-206ENST00000562534 FXR1P51114 621 aaKnown RBP eCLIP17.8■□□□□ 0.44
USB1-206ENST00000562534 PPP2R3AQ06190 1150 aa17.8■□□□□ 0.44
USB1-206ENST00000562534 ENOX2Q16206 610 aaKnown RBP17.8■□□□□ 0.44
USB1-206ENST00000562534 NFIL3Q16649 462 aa17.8■□□□□ 0.44
USB1-206ENST00000562534 SKOR2Q2VWA4 1001 aaPredicted RBP17.8■□□□□ 0.44
USB1-206ENST00000562534 EPC2Q52LR7 807 aa17.8■□□□□ 0.44
USB1-206ENST00000562534 CENPPQ6IPU0 288 aa17.8■□□□□ 0.44
USB1-206ENST00000562534 CRELD2Q6UXH1 353 aaPredicted RBP17.8■□□□□ 0.44
USB1-206ENST00000562534 ZNF280BQ86YH2 543 aa17.8■□□□□ 0.44
USB1-206ENST00000562534 P2RX5Q93086 422 aa17.8■□□□□ 0.44
USB1-206ENST00000562534 SYAP1Q96A49 352 aaPredicted RBP17.8■□□□□ 0.44
USB1-206ENST00000562534 SNX27Q96L92 541 aa17.8■□□□□ 0.44
USB1-206ENST00000562534 FBXL18Q96ME1 805 aa17.8■□□□□ 0.44
USB1-206ENST00000562534 ZNF558Q96NG5 402 aa17.8■□□□□ 0.44
USB1-206ENST00000562534 TMEM175Q9BSA9 504 aa17.8■□□□□ 0.44
USB1-206ENST00000562534 DMAC2Q9NW81 257 aa17.8■□□□□ 0.44
USB1-206ENST00000562534 CNTN3Q9P232 1028 aa17.8■□□□□ 0.44
USB1-206ENST00000562534 COL4A6Q14031 1691 aa17.8■□□□□ 0.44
USB1-206ENST00000562534 C5orf67F2Z3F1 127 aa17.79■□□□□ 0.44
USB1-206ENST00000562534 PTGESO14684 152 aa17.79■□□□□ 0.44
USB1-206ENST00000562534 ARHGEF15O94989 841 aa17.79■□□□□ 0.44
USB1-206ENST00000562534 IL18RAPO95256 599 aa17.79■□□□□ 0.44
USB1-206ENST00000562534 LINC00271P0C7V0 271 aa17.79■□□□□ 0.44
USB1-206ENST00000562534 CXCL8P10145 99 aa17.79■□□□□ 0.44
USB1-206ENST00000562534 BMP6P22004 513 aa17.79■□□□□ 0.44
USB1-206ENST00000562534 BCAR1P56945 870 aa17.79■□□□□ 0.44
USB1-206ENST00000562534 DSC1Q08554 894 aa17.79■□□□□ 0.44
USB1-206ENST00000562534 SURF1Q15526 300 aa17.79■□□□□ 0.44
USB1-206ENST00000562534 EDRF1Q3B7T1 1238 aa17.79■□□□□ 0.44
USB1-206ENST00000562534 ZBTB41Q5SVQ8 909 aa17.79■□□□□ 0.44
USB1-206ENST00000562534 CCDC183Q5T5S1 534 aa17.79■□□□□ 0.44
USB1-206ENST00000562534 KCNT2Q6UVM3 1135 aa17.79■□□□□ 0.44
USB1-206ENST00000562534 COLGALT2Q8IYK4 626 aa17.79■□□□□ 0.44
USB1-206ENST00000562534 MLKLQ8NB16 471 aa17.79■□□□□ 0.44
USB1-206ENST00000562534 FAM212AQ96EL1 285 aa17.79■□□□□ 0.44
USB1-206ENST00000562534 SAAL1Q96ER3 474 aa17.79■□□□□ 0.44
USB1-206ENST00000562534 TSG101Q99816 390 aa17.79■□□□□ 0.44
USB1-206ENST00000562534 C17orf80Q9BSJ5 609 aa17.79■□□□□ 0.44
USB1-206ENST00000562534 FAN1Q9Y2M0 1017 aa17.79■□□□□ 0.44
USB1-206ENST00000562534 DERAQ9Y315 318 aa17.79■□□□□ 0.44
USB1-206ENST00000562534 FNDC1Q4ZHG4 1894 aaPredicted RBP17.78■□□□□ 0.44
USB1-206ENST00000562534 GOLGA8IPA6NC78 632 aa17.78■□□□□ 0.44
USB1-206ENST00000562534 GOLGA8JA6NMD2 632 aa17.78■□□□□ 0.44
USB1-206ENST00000562534 PPP1R3GB7ZBB8 358 aa17.78■□□□□ 0.44
USB1-206ENST00000562534 XPOTO43592 962 aaKnown RBP17.78■□□□□ 0.44
USB1-206ENST00000562534 EXOC3O60645 756 aa17.78■□□□□ 0.44
USB1-206ENST00000562534 ZC3H11AO75152 810 aaKnown RBP eCLIP17.78■□□□□ 0.44
USB1-206ENST00000562534 NR3C1P04150 777 aa17.78■□□□□ 0.44
USB1-206ENST00000562534 GALTP07902 379 aa17.78■□□□□ 0.44
USB1-206ENST00000562534 CTNNB1P35222 781 aa17.78■□□□□ 0.44
USB1-206ENST00000562534 PPM1AP35813 382 aa17.78■□□□□ 0.44
USB1-206ENST00000562534 CYP2J2P51589 502 aa17.78■□□□□ 0.44
USB1-206ENST00000562534 KRT17Q04695 432 aa17.78■□□□□ 0.44
USB1-206ENST00000562534 ADAM9Q13443 819 aa17.78■□□□□ 0.44
USB1-206ENST00000562534 TUSC3Q13454 348 aa17.78■□□□□ 0.44
USB1-206ENST00000562534 NT5DC4Q86YG4 428 aa17.78■□□□□ 0.44
USB1-206ENST00000562534 COLGALT1Q8NBJ5 622 aa17.78■□□□□ 0.44
USB1-206ENST00000562534 RDH13Q8NBN7 331 aa17.78■□□□□ 0.44
USB1-206ENST00000562534 FBXO22Q8NEZ5 403 aa17.78■□□□□ 0.44
USB1-206ENST00000562534 NOC3LQ8WTT2 800 aaKnown RBP17.78■□□□□ 0.44
USB1-206ENST00000562534 ARNTL2Q8WYA1 636 aa17.78■□□□□ 0.44
USB1-206ENST00000562534 PPP1R10Q96QC0 940 aaKnown RBP17.78■□□□□ 0.44
USB1-206ENST00000562534 C11orf84Q9BUA3 381 aaPredicted RBP17.78■□□□□ 0.44
USB1-206ENST00000562534 COLEC11Q9BWP8 271 aa17.78■□□□□ 0.44
USB1-206ENST00000562534 TTYH1Q9H313 450 aaPredicted RBP17.78■□□□□ 0.44
USB1-206ENST00000562534 SPG21Q9NZD8 308 aa17.78■□□□□ 0.44
USB1-206ENST00000562534 FRMD4BQ9Y2L6 1034 aa17.78■□□□□ 0.44
USB1-206ENST00000562534 H3BNC9 293 aa17.77■□□□□ 0.44
USB1-206ENST00000562534 CYP3A5P20815 502 aa17.77■□□□□ 0.44
USB1-206ENST00000562534 CCNE1P24864 410 aa17.77■□□□□ 0.44
USB1-206ENST00000562534 LRRC63Q05C16 580 aa17.77■□□□□ 0.44
USB1-206ENST00000562534 ZBTB6Q15916 424 aa17.77■□□□□ 0.44
USB1-206ENST00000562534 SNRNP35Q16560 246 aaKnown RBP17.77■□□□□ 0.44
USB1-206ENST00000562534 KLHL40Q2TBA0 621 aa17.77■□□□□ 0.44
USB1-206ENST00000562534 FOXR2Q6PJQ5 311 aa17.77■□□□□ 0.44
USB1-206ENST00000562534 RBM43Q6ZSC3 357 aaKnown RBP17.77■□□□□ 0.44
USB1-206ENST00000562534 DDX27Q96GQ7 796 aaKnown RBP17.77■□□□□ 0.44
USB1-206ENST00000562534 UROC1Q96N76 676 aa17.77■□□□□ 0.44
USB1-206ENST00000562534 ZMAT2Q96NC0 199 aaKnown RBP17.77■□□□□ 0.44
USB1-206ENST00000562534 CXCL16Q9H2A7 254 aa17.77■□□□□ 0.44
USB1-206ENST00000562534 CERS4Q9HA82 394 aa17.77■□□□□ 0.44
USB1-206ENST00000562534 RBAKQ9NYW8 714 aaPredicted RBP17.77■□□□□ 0.44
USB1-206ENST00000562534 DNAJB4Q9UDY4 337 aa17.77■□□□□ 0.44
USB1-206ENST00000562534 STK39Q9UEW8 545 aa17.77■□□□□ 0.44
USB1-206ENST00000562534 PUF60Q9UHX1 559 aaKnown RBP17.77■□□□□ 0.44
USB1-206ENST00000562534 MTUS1Q9ULD2 1270 aa17.77■□□□□ 0.44
USB1-206ENST00000562534 PLAGL2Q9UPG8 496 aa17.77■□□□□ 0.44
USB1-206ENST00000562534 BICDL2A1A5D9 508 aa17.76■□□□□ 0.43
USB1-206ENST00000562534 NRP1O14786 923 aa17.76■□□□□ 0.43
USB1-206ENST00000562534 MEFVO15553 781 aaPredicted RBP17.76■□□□□ 0.43
USB1-206ENST00000562534 LETM1O95202 739 aaPredicted RBP17.76■□□□□ 0.43
USB1-206ENST00000562534 CD44P16070 742 aaKnown RBP17.76■□□□□ 0.43
USB1-206ENST00000562534 NR2F2P24468 414 aa17.76■□□□□ 0.43
USB1-206ENST00000562534 RPL9P32969 192 aaKnown RBP17.76■□□□□ 0.43
USB1-206ENST00000562534 OR1G1P47890 313 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms