RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 PABPC3Q9H361 631 aaKnown RBP14.2□□□□□ -0.14
CLK3-206ENST00000562078 METTL5Q9NRN9 209 aaKnown RBP14.2□□□□□ -0.14
CLK3-206ENST00000562078 GGA3Q9NZ52 723 aa14.2□□□□□ -0.14
CLK3-206ENST00000562078 PGAP2Q9UHJ9 254 aa14.2□□□□□ -0.14
CLK3-206ENST00000562078 ZBTB21Q9ULJ3 1066 aa14.2□□□□□ -0.14
CLK3-206ENST00000562078 RBBP6Q7Z6E9 1792 aaKnown RBP14.2□□□□□ -0.14
CLK3-206ENST00000562078 SSU72P8A0A1W2PR75 194 aa14.2□□□□□ -0.14
CLK3-206ENST00000562078 AGTP01019 485 aa14.2□□□□□ -0.14
CLK3-206ENST00000562078 ZCCHC18P0CG32 403 aa14.2□□□□□ -0.14
CLK3-206ENST00000562078 CREB1P16220 341 aa14.2□□□□□ -0.14
CLK3-206ENST00000562078 HOXA13P31271 388 aaPredicted RBP14.2□□□□□ -0.14
CLK3-206ENST00000562078 VWA3BQ502W6 1294 aa14.2□□□□□ -0.14
CLK3-206ENST00000562078 DNAAF5Q86Y56 855 aa14.2□□□□□ -0.14
CLK3-206ENST00000562078 FAM114A1Q8IWE2 563 aa14.2□□□□□ -0.14
CLK3-206ENST00000562078 GDAP1Q8TB36 358 aa14.2□□□□□ -0.14
CLK3-206ENST00000562078 SCG3Q8WXD2 468 aaKnown RBP14.2□□□□□ -0.14
CLK3-206ENST00000562078 SEC14L1Q92503 715 aa14.2□□□□□ -0.14
CLK3-206ENST00000562078 NCSTNQ92542 709 aa14.2□□□□□ -0.14
CLK3-206ENST00000562078 GATA6Q92908 595 aa14.2□□□□□ -0.14
CLK3-206ENST00000562078 TEPSINQ96N21 525 aa14.2□□□□□ -0.14
CLK3-206ENST00000562078 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.2□□□□□ -0.144e-8■■■■□ 20.6
CLK3-206ENST00000562078 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.2□□□□□ -0.14
CLK3-206ENST00000562078 IQCGQ9H095 443 aaKnown RBP14.2□□□□□ -0.14
CLK3-206ENST00000562078 MYLK2Q9H1R3 596 aa14.2□□□□□ -0.14
CLK3-206ENST00000562078 FAM114A2Q9NRY5 505 aa14.2□□□□□ -0.14
CLK3-206ENST00000562078 TXLNGQ9NUQ3 528 aa14.2□□□□□ -0.14
CLK3-206ENST00000562078 INTUQ9ULD6 942 aa14.2□□□□□ -0.14
CLK3-206ENST00000562078 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.19□□□□□ -0.14
CLK3-206ENST00000562078 TLR2O60603 784 aa14.19□□□□□ -0.14
CLK3-206ENST00000562078 STAT3P40763 770 aa14.19□□□□□ -0.14
CLK3-206ENST00000562078 PPP1R2P41236 205 aa14.19□□□□□ -0.14
CLK3-206ENST00000562078 STAT2P52630 851 aa14.19□□□□□ -0.14
CLK3-206ENST00000562078 KCNMA1Q12791 1236 aa14.19□□□□□ -0.14
CLK3-206ENST00000562078 ZYXQ15942 572 aaKnown RBP14.19□□□□□ -0.14
CLK3-206ENST00000562078 PRR16Q569H4 304 aa14.19□□□□□ -0.14
CLK3-206ENST00000562078 FAM83BQ5T0W9 1011 aa14.19□□□□□ -0.14
CLK3-206ENST00000562078 SNX30Q5VWJ9 437 aa14.19□□□□□ -0.14
CLK3-206ENST00000562078 BTNL9Q6UXG8 535 aa14.19□□□□□ -0.14
CLK3-206ENST00000562078 METTL13Q8N6R0 699 aa14.19□□□□□ -0.14
CLK3-206ENST00000562078 LRRC8CQ8TDW0 803 aa14.19□□□□□ -0.14
CLK3-206ENST00000562078 IWS1Q96ST2 819 aa14.19□□□□□ -0.14
CLK3-206ENST00000562078 KLHL14Q9P2G3 628 aa14.19□□□□□ -0.14
CLK3-206ENST00000562078 KDM3AQ9Y4C1 1321 aa14.19□□□□□ -0.14
CLK3-206ENST00000562078 CYP3A7-CYP3A51PA0A087WV96 503 aa14.19□□□□□ -0.14
CLK3-206ENST00000562078 PVALEFA0A1B0GWK0 134 aa14.19□□□□□ -0.14
CLK3-206ENST00000562078 POTEB3A0JP26 581 aa14.19□□□□□ -0.14
CLK3-206ENST00000562078 MAGEA13PA6NCF6 341 aa14.19□□□□□ -0.14
CLK3-206ENST00000562078 POTECB2RU33 542 aa14.19□□□□□ -0.14
CLK3-206ENST00000562078 SKIP12755 728 aa14.19□□□□□ -0.14
CLK3-206ENST00000562078 CYP3A7P24462 503 aa14.19□□□□□ -0.14
CLK3-206ENST00000562078 VHLP40337 213 aa14.19□□□□□ -0.14
CLK3-206ENST00000562078 ARID5AQ03989 594 aa14.19□□□□□ -0.14
CLK3-206ENST00000562078 P3H1Q32P28 736 aa14.19□□□□□ -0.14
CLK3-206ENST00000562078 SFMBT2Q5VUG0 894 aa14.19□□□□□ -0.14
CLK3-206ENST00000562078 POTEBQ6S5H4 581 aa14.19□□□□□ -0.14
CLK3-206ENST00000562078 ZNF365Q70YC5 407 aa14.19□□□□□ -0.14
CLK3-206ENST00000562078 CRYGNQ8WXF5 182 aa14.19□□□□□ -0.14
CLK3-206ENST00000562078 TBC1D10AQ9BXI6 508 aa14.19□□□□□ -0.14
CLK3-206ENST00000562078 SEMA6BQ9H3T3 888 aa14.19□□□□□ -0.14
CLK3-206ENST00000562078 CHMP2BQ9UQN3 213 aa14.19□□□□□ -0.14
CLK3-206ENST00000562078 GMEB1Q9Y692 573 aa14.19□□□□□ -0.14
CLK3-206ENST00000562078 A0A087X0T9 212 aa14.18□□□□□ -0.14
CLK3-206ENST00000562078 FAM228BP0C875 321 aa14.18□□□□□ -0.14
CLK3-206ENST00000562078 CAP2P40123 477 aa14.18□□□□□ -0.14
CLK3-206ENST00000562078 PABPC4Q13310 644 aaKnown RBP eCLIP14.18□□□□□ -0.14
CLK3-206ENST00000562078 LSAMPQ13449 338 aa14.18□□□□□ -0.14
CLK3-206ENST00000562078 KHDC1Q4VXA5 237 aaKnown RBP14.18□□□□□ -0.14
CLK3-206ENST00000562078 COBLL1Q53SF7 1204 aa14.18□□□□□ -0.14
CLK3-206ENST00000562078 EXOC3L1Q86VI1 746 aa14.18□□□□□ -0.14
CLK3-206ENST00000562078 VSIG1Q86XK7 387 aa14.18□□□□□ -0.14
CLK3-206ENST00000562078 AGGF1Q8N302 714 aaeCLIP14.18□□□□□ -0.14
CLK3-206ENST00000562078 ANKRD42Q8N9B4 389 aa14.18□□□□□ -0.14
CLK3-206ENST00000562078 GLIS3Q8NEA6 775 aa14.18□□□□□ -0.14
CLK3-206ENST00000562078 ERP27Q96DN0 273 aa14.18□□□□□ -0.14
CLK3-206ENST00000562078 MBOAT7Q96N66 472 aa14.18□□□□□ -0.14
CLK3-206ENST00000562078 PDP2Q9P2J9 529 aa14.18□□□□□ -0.14
CLK3-206ENST00000562078 KIAA1024Q9UPX6 916 aa14.18□□□□□ -0.14
CLK3-206ENST00000562078 TMX2Q9Y320 296 aa14.18□□□□□ -0.14
CLK3-206ENST00000562078 FOXO6A8MYZ6 492 aa14.18□□□□□ -0.14
CLK3-206ENST00000562078 E9PMD0 336 aa14.18□□□□□ -0.14
CLK3-206ENST00000562078 CES2O00748 559 aa14.18□□□□□ -0.14
CLK3-206ENST00000562078 CCDC6Q16204 474 aa14.18□□□□□ -0.14
CLK3-206ENST00000562078 SLC9C1Q4G0N8 1177 aa14.18□□□□□ -0.14
CLK3-206ENST00000562078 C6orf118Q5T5N4 469 aa14.18□□□□□ -0.14
CLK3-206ENST00000562078 NBPF12Q5TAG4 269 aaPredicted RBP14.18□□□□□ -0.14
CLK3-206ENST00000562078 ARL10Q8N8L6 244 aa14.18□□□□□ -0.14
CLK3-206ENST00000562078 ETNPPLQ8TBG4 499 aa14.18□□□□□ -0.14
CLK3-206ENST00000562078 KIAA1683Q9H0B3 1180 aa14.18□□□□□ -0.14
CLK3-206ENST00000562078 NT5C3AQ9H0P0 336 aa14.18□□□□□ -0.14
CLK3-206ENST00000562078 SEMA4AQ9H3S1 761 aa14.18□□□□□ -0.14
CLK3-206ENST00000562078 ADARB2Q9NS39 739 aaKnown RBP14.18□□□□□ -0.14
CLK3-206ENST00000562078 ZDHHC18Q9NUE0 388 aa14.18□□□□□ -0.14
CLK3-206ENST00000562078 HSFX1Q9UBD0 423 aa14.18□□□□□ -0.14
CLK3-206ENST00000562078 SYNPO2Q9UMS6 1093 aa14.18□□□□□ -0.14
CLK3-206ENST00000562078 NR2E1Q9Y466 385 aa14.18□□□□□ -0.14
CLK3-206ENST00000562078 TMEM120BA0PK00 339 aa14.17□□□□□ -0.14
CLK3-206ENST00000562078 FAM86B1E9PN63 330 aa14.17□□□□□ -0.14
CLK3-206ENST00000562078 TMCC1O94876 653 aa14.17□□□□□ -0.14
CLK3-206ENST00000562078 GH1P01241 217 aa14.17□□□□□ -0.14
CLK3-206ENST00000562078 FAM86B2P0C5J1 330 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms