RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 AGAP2Q99490 1192 aa3.22□□□□□ -1.89
CHD9-204ENST00000561869 PRRX2Q99811 253 aa3.22□□□□□ -1.89
CHD9-204ENST00000561869 ADI1Q9BV57 179 aa3.22□□□□□ -1.89
CHD9-204ENST00000561869 LDAHQ9H6V9 325 aa3.22□□□□□ -1.89
CHD9-204ENST00000561869 AKIP1Q9NQ31 210 aa3.22□□□□□ -1.89
CHD9-204ENST00000561869 FAM30AQ9NZY2 134 aa3.22□□□□□ -1.89
CHD9-204ENST00000561869 MCM8Q9UJA3 840 aa3.22□□□□□ -1.89
CHD9-204ENST00000561869 PCDHGA9Q9Y5G4 932 aaKnown RBP3.22□□□□□ -1.89
CHD9-204ENST00000561869 PCDHGA8Q9Y5G5 932 aa3.22□□□□□ -1.89
CHD9-204ENST00000561869 PCDHGA7Q9Y5G6 932 aa3.22□□□□□ -1.89
CHD9-204ENST00000561869 PCDHGA6Q9Y5G7 932 aa3.22□□□□□ -1.89
CHD9-204ENST00000561869 PCDHGA3Q9Y5H0 932 aa3.22□□□□□ -1.89
CHD9-204ENST00000561869 A0A087X1B8 175 aa3.21□□□□□ -1.9
CHD9-204ENST00000561869 GAGE12BA1L429 117 aa3.21□□□□□ -1.9
CHD9-204ENST00000561869 CCDC78A2IDD5 438 aa3.21□□□□□ -1.9
CHD9-204ENST00000561869 GAGE12HA6NDE8 117 aa3.21□□□□□ -1.9
CHD9-204ENST00000561869 DIRC3C9JPN6 131 aa3.21□□□□□ -1.9
CHD9-204ENST00000561869 RNASET2O00584 256 aaKnown RBP3.21□□□□□ -1.9
CHD9-204ENST00000561869 SNRPA1P09661 255 aaKnown RBP3.21□□□□□ -1.9
CHD9-204ENST00000561869 LAG3P18627 525 aa3.21□□□□□ -1.9
CHD9-204ENST00000561869 CDK11BP21127 795 aaKnown RBP3.21□□□□□ -1.9
CHD9-204ENST00000561869 FPR1P21462 350 aa3.21□□□□□ -1.9
CHD9-204ENST00000561869 MGAT1P26572 445 aa3.21□□□□□ -1.9
CHD9-204ENST00000561869 BMPR1AP36894 532 aa3.21□□□□□ -1.9
CHD9-204ENST00000561869 CHN2P52757 468 aa3.21□□□□□ -1.9
CHD9-204ENST00000561869 ATP8B2P98198 1209 aa3.21□□□□□ -1.9
CHD9-204ENST00000561869 PURAQ00577 322 aaKnown RBP3.21□□□□□ -1.9
CHD9-204ENST00000561869 SMN1Q16637 294 aaKnown RBP3.21□□□□□ -1.9
CHD9-204ENST00000561869 KRTAP15-1Q3LI76 137 aa3.21□□□□□ -1.9
CHD9-204ENST00000561869 GJC2Q5T442 439 aaPredicted RBP3.21□□□□□ -1.9
CHD9-204ENST00000561869 ATXN7L2Q5T6C5 722 aaPredicted RBP3.21□□□□□ -1.9
CHD9-204ENST00000561869 OTUD7BQ6GQQ9 843 aa3.21□□□□□ -1.9
CHD9-204ENST00000561869 LAIR1Q6GTX8 287 aa3.21□□□□□ -1.9
CHD9-204ENST00000561869 FAM180AQ6UWF9 173 aa3.21□□□□□ -1.9
CHD9-204ENST00000561869 MRGPRGQ86SM5 289 aa3.21□□□□□ -1.9
CHD9-204ENST00000561869 SYNE4Q8N205 404 aa3.21□□□□□ -1.9
CHD9-204ENST00000561869 ZGPATQ8N5A5 531 aaKnown RBP3.21□□□□□ -1.9
CHD9-204ENST00000561869 C1orf162Q8NEQ5 155 aaPredicted RBP3.21□□□□□ -1.9
CHD9-204ENST00000561869 PROKR1Q8TCW9 393 aa3.21□□□□□ -1.9
CHD9-204ENST00000561869 CASKIN2Q8WXE0 1202 aa3.21□□□□□ -1.9
CHD9-204ENST00000561869 SSH1Q8WYL5 1049 aa3.21□□□□□ -1.9
CHD9-204ENST00000561869 JADE3Q92613 823 aa3.21□□□□□ -1.9
CHD9-204ENST00000561869 DPF2Q92785 391 aa3.21□□□□□ -1.9
CHD9-204ENST00000561869 ADAM2Q99965 735 aa3.21□□□□□ -1.9
CHD9-204ENST00000561869 MYOCQ99972 504 aa3.21□□□□□ -1.9
CHD9-204ENST00000561869 TTPALQ9BTX7 342 aa3.21□□□□□ -1.9
CHD9-204ENST00000561869 MRI1Q9BV20 369 aa3.21□□□□□ -1.9
CHD9-204ENST00000561869 CCDC8Q9H0W5 538 aaPredicted RBP3.21□□□□□ -1.9
CHD9-204ENST00000561869 LANCL2Q9NS86 450 aa3.21□□□□□ -1.9
CHD9-204ENST00000561869 POGKQ9P215 609 aa3.21□□□□□ -1.9
CHD9-204ENST00000561869 TUBD1Q9UJT1 453 aa3.21□□□□□ -1.9
CHD9-204ENST00000561869 AJAP1Q9UKB5 411 aaPredicted RBP3.21□□□□□ -1.9
CHD9-204ENST00000561869 DMRT1Q9Y5R6 373 aa3.21□□□□□ -1.9
CHD9-204ENST00000561869 ACTL7AQ9Y615 435 aa3.21□□□□□ -1.9
CHD9-204ENST00000561869 WASHC2AQ641Q2 1341 aa3.2□□□□□ -1.9
CHD9-204ENST00000561869 WDR33Q9C0J8 1336 aaKnown RBP3.2□□□□□ -1.9
CHD9-204ENST00000561869 ENDOD1O94919 500 aa3.2□□□□□ -1.9
CHD9-204ENST00000561869 PRSS23O95084 383 aa3.2□□□□□ -1.9
CHD9-204ENST00000561869 NDUFA10O95299 355 aa3.2□□□□□ -1.9
CHD9-204ENST00000561869 ABHD16AO95870 558 aa3.2□□□□□ -1.9
CHD9-204ENST00000561869 ELANEP08246 267 aa3.2□□□□□ -1.9
CHD9-204ENST00000561869 IL2RBP14784 551 aa3.2□□□□□ -1.9
CHD9-204ENST00000561869 C5AR1P21730 350 aa3.2□□□□□ -1.9
CHD9-204ENST00000561869 ZEB1P37275 1124 aaPredicted RBP3.2□□□□□ -1.9
CHD9-204ENST00000561869 ALDH1A3P47895 512 aa3.2□□□□□ -1.9
CHD9-204ENST00000561869 PER3P56645 1201 aa3.2□□□□□ -1.9
CHD9-204ENST00000561869 INHBEP58166 350 aa3.2□□□□□ -1.9
CHD9-204ENST00000561869 MTM1Q13496 603 aa3.2□□□□□ -1.9
CHD9-204ENST00000561869 MTMR1Q13613 665 aa3.2□□□□□ -1.9
CHD9-204ENST00000561869 TIGD2Q4W5G0 525 aa3.2□□□□□ -1.9
CHD9-204ENST00000561869 RRP12Q5JTH9 1297 aaKnown RBP3.2□□□□□ -1.9
CHD9-204ENST00000561869 LY6G5CQ5SRR4 150 aa3.2□□□□□ -1.9
CHD9-204ENST00000561869 SYDE2Q5VT97 1194 aa3.2□□□□□ -1.9
CHD9-204ENST00000561869 SEM1Q6ZVN7 128 aa3.2□□□□□ -1.9
CHD9-204ENST00000561869 PLXDC1Q8IUK5 500 aa3.2□□□□□ -1.9
CHD9-204ENST00000561869 ARHGEF19Q8IW93 802 aa3.2□□□□□ -1.9
CHD9-204ENST00000561869 RHOT2Q8IXI1 618 aa3.2□□□□□ -1.9
CHD9-204ENST00000561869 NRG4Q8WWG1 115 aa3.2□□□□□ -1.9
CHD9-204ENST00000561869 FAXDC2Q96IV6 333 aa3.2□□□□□ -1.9
CHD9-204ENST00000561869 FAM193BQ96PV7 902 aaPredicted RBP3.2□□□□□ -1.9
CHD9-204ENST00000561869 UHRF1Q96T88 793 aaPredicted RBP3.2□□□□□ -1.9
CHD9-204ENST00000561869 SENP6Q9GZR1 1112 aaPredicted RBP3.2□□□□□ -1.9
CHD9-204ENST00000561869 KLHL11Q9NVR0 708 aa3.2□□□□□ -1.9
CHD9-204ENST00000561869 FBXO34Q9NWN3 711 aa3.2□□□□□ -1.9
CHD9-204ENST00000561869 TRHDEQ9UKU6 1024 aa3.2□□□□□ -1.9
CHD9-204ENST00000561869 USP15Q9Y4E8 981 aaPredicted RBP3.2□□□□□ -1.9
CHD9-204ENST00000561869 TMEM191CA6NGB0 347 aa3.19□□□□□ -1.9
CHD9-204ENST00000561869 FAM171A2A8MVW0 826 aa3.19□□□□□ -1.9
CHD9-204ENST00000561869 GABRDO14764 452 aa3.19□□□□□ -1.9
CHD9-204ENST00000561869 RAMP2O60895 175 aa3.19□□□□□ -1.9
CHD9-204ENST00000561869 PPFIA4O75335 1185 aa3.19□□□□□ -1.9
CHD9-204ENST00000561869 KATNA1O75449 491 aa3.19□□□□□ -1.9
CHD9-204ENST00000561869 MT-CO1P00395 513 aa3.19□□□□□ -1.9
CHD9-204ENST00000561869 GCP02774 474 aa3.19□□□□□ -1.9
CHD9-204ENST00000561869 CFIP05156 583 aa3.19□□□□□ -1.9
CHD9-204ENST00000561869 RAP2AP10114 183 aa3.19□□□□□ -1.9
CHD9-204ENST00000561869 ATP5JP18859 108 aa3.19□□□□□ -1.9
CHD9-204ENST00000561869 SLC6A2P23975 617 aa3.19□□□□□ -1.9
CHD9-204ENST00000561869 EDNRBP24530 442 aa3.19□□□□□ -1.9
CHD9-204ENST00000561869 GUCY2FP51841 1108 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms