RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 PKD2L1Q9P0L9 805 aa14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 PPP1R9AQ9ULJ8 1098 aa14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 RPL26L1Q9UNX3 145 aaKnown RBP14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 ASTN2O75129 1339 aaPredicted RBP14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 A0A087X0T9 212 aa14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 RNF8O76064 485 aa14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 ZBTB7AO95365 584 aa14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 GSTA2P09210 222 aa14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 FAM228BP0C875 321 aa14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 ZBTB48P10074 688 aaPredicted RBP14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 CALB2P22676 271 aa14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 PMS2P54278 862 aa14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 MRPS9P82933 396 aaKnown RBP14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 KLC1Q07866 573 aa14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 PLS1Q14651 629 aa14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 COG2Q14746 738 aa14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 SPATA21Q7Z572 469 aa14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 SESTD1Q86VW0 696 aa14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 DAW1Q8N136 415 aa14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 SAMD3Q8N6K7 520 aa14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 LRRC57Q8N9N7 239 aa14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 STRA6Q9BX79 667 aa14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 HOMER2Q9NSB8 354 aa14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 TXLNGQ9NUQ3 528 aa14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 DMAC2Q9NW81 257 aa14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 MAP3K20Q9NYL2 800 aaKnown RBP14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 SUCLA2Q9P2R7 463 aaPredicted RBP14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 DIS3Q9Y2L1 958 aaKnown RBP14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 ATP8A1Q9Y2Q0 1164 aa14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 DOCK1Q14185 1865 aa14.93□□□□□ -0.02
RABGGTA-220ENST00000560998 PARP14Q460N5 1801 aa14.93□□□□□ -0.02
RABGGTA-220ENST00000560998 FAM187AA6NFU0 413 aa14.93□□□□□ -0.02
RABGGTA-220ENST00000560998 P4HBP07237 508 aaKnown RBP14.93□□□□□ -0.02
RABGGTA-220ENST00000560998 VCAM1P19320 739 aa14.93□□□□□ -0.02
RABGGTA-220ENST00000560998 PCK1P35558 622 aa14.93□□□□□ -0.02
RABGGTA-220ENST00000560998 MTMR2Q13614 643 aa14.93□□□□□ -0.02
RABGGTA-220ENST00000560998 ENOX2Q16206 610 aaKnown RBP14.93□□□□□ -0.02
RABGGTA-220ENST00000560998 CNGA2Q16280 664 aa14.93□□□□□ -0.02
RABGGTA-220ENST00000560998 TNFAIP8L3Q5GJ75 292 aa14.93□□□□□ -0.02
RABGGTA-220ENST00000560998 PADI6Q6TGC4 694 aa14.93□□□□□ -0.02
RABGGTA-220ENST00000560998 HS2ST1Q7LGA3 356 aa14.93□□□□□ -0.02
RABGGTA-220ENST00000560998 SYCE1Q8N0S2 351 aa14.93□□□□□ -0.02
RABGGTA-220ENST00000560998 FAM81AQ8TBF8 368 aa14.93□□□□□ -0.02
RABGGTA-220ENST00000560998 AGPAT3Q9NRZ7 376 aa14.93□□□□□ -0.02
RABGGTA-220ENST00000560998 GCNT4Q9P109 453 aa14.93□□□□□ -0.02
RABGGTA-220ENST00000560998 AJAP1Q9UKB5 411 aaPredicted RBP14.93□□□□□ -0.02
RABGGTA-220ENST00000560998 STK38LQ9Y2H1 464 aa14.93□□□□□ -0.02
RABGGTA-220ENST00000560998 BZW2Q9Y6E2 419 aaKnown RBP14.93□□□□□ -0.02
RABGGTA-220ENST00000560998 GMPSP49915 693 aaPredicted RBP14.93□□□□□ -0.02
RABGGTA-220ENST00000560998 DRG2P55039 364 aaKnown RBP14.93□□□□□ -0.02
RABGGTA-220ENST00000560998 JAM2P57087 298 aa14.93□□□□□ -0.02
RABGGTA-220ENST00000560998 PTK2Q05397 1052 aa14.93□□□□□ -0.02
RABGGTA-220ENST00000560998 IRGCQ6NXR0 463 aa14.93□□□□□ -0.02
RABGGTA-220ENST00000560998 SAMD7Q7Z3H4 446 aa14.93□□□□□ -0.02
RABGGTA-220ENST00000560998 ZNF571Q7Z3V5 609 aaPredicted RBP14.93□□□□□ -0.02
RABGGTA-220ENST00000560998 MICALL2Q8IY33 904 aa14.93□□□□□ -0.02
RABGGTA-220ENST00000560998 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.93□□□□□ -0.02
RABGGTA-220ENST00000560998 AGGF1Q8N302 714 aaeCLIP14.93□□□□□ -0.02
RABGGTA-220ENST00000560998 METTL13Q8N6R0 699 aa14.93□□□□□ -0.02
RABGGTA-220ENST00000560998 ENDOVQ8N8Q3 282 aaKnown RBP14.93□□□□□ -0.02
RABGGTA-220ENST00000560998 RBM46Q8TBY0 533 aaKnown RBP14.93□□□□□ -0.02
RABGGTA-220ENST00000560998 ATP8B4Q8TF62 1192 aa14.93□□□□□ -0.02
RABGGTA-220ENST00000560998 TAAR1Q96RJ0 339 aa14.93□□□□□ -0.02
RABGGTA-220ENST00000560998 AP1M1Q9BXS5 423 aa14.93□□□□□ -0.02
RABGGTA-220ENST00000560998 EPB41L4BQ9H329 900 aa14.93□□□□□ -0.02
RABGGTA-220ENST00000560998 RPAP3Q9H6T3 665 aaPredicted RBP14.93□□□□□ -0.02
RABGGTA-220ENST00000560998 ADAMTS1Q9UHI8 967 aa14.93□□□□□ -0.02
RABGGTA-220ENST00000560998 AMACRQ9UHK6 382 aa14.93□□□□□ -0.02
RABGGTA-220ENST00000560998 DBR1Q9UK59 544 aaKnown RBP14.93□□□□□ -0.02
RABGGTA-220ENST00000560998 C2CD2Q9Y426 696 aa14.93□□□□□ -0.02
RABGGTA-220ENST00000560998 A8MUI8 341 aa14.92□□□□□ -0.02
RABGGTA-220ENST00000560998 TTI1O43156 1089 aa14.92□□□□□ -0.02
RABGGTA-220ENST00000560998 PRKCIP41743 596 aa14.92□□□□□ -0.02
RABGGTA-220ENST00000560998 RPS6P62753 249 aaKnown RBP14.92□□□□□ -0.02
RABGGTA-220ENST00000560998 POU5F1Q01860 360 aaKnown RBP14.92□□□□□ -0.02
RABGGTA-220ENST00000560998 PPARDQ03181 441 aa14.92□□□□□ -0.02
RABGGTA-220ENST00000560998 MTMR1Q13613 665 aa14.92□□□□□ -0.02
RABGGTA-220ENST00000560998 NUGGCQ68CJ6 796 aa14.92□□□□□ -0.02
RABGGTA-220ENST00000560998 RNF43Q68DV7 783 aa14.92□□□□□ -0.02
RABGGTA-220ENST00000560998 MFSD5Q6N075 450 aa14.92□□□□□ -0.02
RABGGTA-220ENST00000560998 SLFN11Q7Z7L1 901 aa14.92□□□□□ -0.02
RABGGTA-220ENST00000560998 STK32AQ8WU08 396 aa14.92□□□□□ -0.02
RABGGTA-220ENST00000560998 EPAS1Q99814 870 aa14.92□□□□□ -0.02
RABGGTA-220ENST00000560998 AZI2Q9H6S1 392 aa14.92□□□□□ -0.02
RABGGTA-220ENST00000560998 CYP39A1Q9NYL5 469 aa14.92□□□□□ -0.02
RABGGTA-220ENST00000560998 HACL1Q9UJ83 578 aa14.92□□□□□ -0.02
RABGGTA-220ENST00000560998 ZHX2Q9Y6X8 837 aa14.92□□□□□ -0.02
RABGGTA-220ENST00000560998 A0A0A6YYK5 440 aaPredicted RBP14.91□□□□□ -0.02
RABGGTA-220ENST00000560998 ZBED4O75132 1171 aa14.91□□□□□ -0.02
RABGGTA-220ENST00000560998 UNC5CO95185 931 aa14.91□□□□□ -0.02
RABGGTA-220ENST00000560998 LYPLA2O95372 231 aa14.91□□□□□ -0.02
RABGGTA-220ENST00000560998 LMNAP02545 664 aaKnown RBP14.91□□□□□ -0.02
RABGGTA-220ENST00000560998 EIF2AK2P19525 551 aaKnown RBP14.91□□□□□ -0.02
RABGGTA-220ENST00000560998 ACVR2BQ13705 512 aa14.91□□□□□ -0.02
RABGGTA-220ENST00000560998 PGM5Q15124 567 aa14.91□□□□□ -0.02
RABGGTA-220ENST00000560998 TBC1D10BQ4KMP7 808 aaPredicted RBP14.91□□□□□ -0.02
RABGGTA-220ENST00000560998 LRRC23Q53EV4 343 aaPredicted RBP14.91□□□□□ -0.02
RABGGTA-220ENST00000560998 TRIM68Q6AZZ1 485 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms