RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 FASNP49327 2511 aaKnown RBP9.97□□□□□ -0.81
RABGGTA-217ENST00000560521 PCNX2A6NKB5 2137 aa9.97□□□□□ -0.81
RABGGTA-217ENST00000560521 PI4KAP42356 2102 aa9.97□□□□□ -0.81
RABGGTA-217ENST00000560521 ABCA7Q8IZY2 2146 aa9.97□□□□□ -0.81
RABGGTA-217ENST00000560521 ADAMTS20P59510 1910 aa9.96□□□□□ -0.81
RABGGTA-217ENST00000560521 CEP192Q8TEP8 1941 aa9.96□□□□□ -0.81
RABGGTA-217ENST00000560521 CYP3A7-CYP3A51PA0A087WV96 503 aa9.96□□□□□ -0.82
RABGGTA-217ENST00000560521 TDP2O95551 362 aa9.96□□□□□ -0.82
RABGGTA-217ENST00000560521 RHOP08100 348 aa9.96□□□□□ -0.82
RABGGTA-217ENST00000560521 CHRNB1P11230 501 aa9.96□□□□□ -0.82
RABGGTA-217ENST00000560521 ARF4P18085 180 aaPredicted RBP9.96□□□□□ -0.82
RABGGTA-217ENST00000560521 FCARP24071 287 aa9.96□□□□□ -0.82
RABGGTA-217ENST00000560521 CYP3A7P24462 503 aa9.96□□□□□ -0.82
RABGGTA-217ENST00000560521 OR1D2P34982 312 aa9.96□□□□□ -0.82
RABGGTA-217ENST00000560521 CXCL12P48061 93 aa9.96□□□□□ -0.82
RABGGTA-217ENST00000560521 LIMK1P53667 647 aa9.96□□□□□ -0.82
RABGGTA-217ENST00000560521 RCAN1P53805 252 aa9.96□□□□□ -0.82
RABGGTA-217ENST00000560521 RAB33AQ14088 237 aa9.96□□□□□ -0.82
RABGGTA-217ENST00000560521 GRM2Q14416 872 aa9.96□□□□□ -0.82
RABGGTA-217ENST00000560521 PCBP1Q15365 356 aaKnown RBP eCLIP9.96□□□□□ -0.821e-6■■■□□ 16.1
RABGGTA-217ENST00000560521 AMHR2Q16671 573 aa9.96□□□□□ -0.82
RABGGTA-217ENST00000560521 ADCK5Q3MIX3 580 aa9.96□□□□□ -0.82
RABGGTA-217ENST00000560521 IL31Q6EBC2 164 aa9.96□□□□□ -0.82
RABGGTA-217ENST00000560521 DHX32Q7L7V1 743 aaKnown RBP9.96□□□□□ -0.82
RABGGTA-217ENST00000560521 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.96□□□□□ -0.82
RABGGTA-217ENST00000560521 CDR2LQ86X02 465 aaPredicted RBP9.96□□□□□ -0.82
RABGGTA-217ENST00000560521 EXOC8Q8IYI6 725 aa9.96□□□□□ -0.82
RABGGTA-217ENST00000560521 FAM160A2Q8N612 972 aaPredicted RBP9.96□□□□□ -0.82
RABGGTA-217ENST00000560521 ETNPPLQ8TBG4 499 aa9.96□□□□□ -0.82
RABGGTA-217ENST00000560521 BICD2Q8TD16 824 aa9.96□□□□□ -0.82
RABGGTA-217ENST00000560521 TBCKQ8TEA7 893 aa9.96□□□□□ -0.82
RABGGTA-217ENST00000560521 FAM3CQ92520 227 aa9.96□□□□□ -0.82
RABGGTA-217ENST00000560521 CCDC51Q96ER9 411 aa9.96□□□□□ -0.82
RABGGTA-217ENST00000560521 IER2Q9BTL4 223 aa9.96□□□□□ -0.82
RABGGTA-217ENST00000560521 CXCL16Q9H2A7 254 aa9.96□□□□□ -0.82
RABGGTA-217ENST00000560521 BRD9Q9H8M2 597 aa9.96□□□□□ -0.82
RABGGTA-217ENST00000560521 ZNF334Q9HCZ1 680 aaPredicted RBP9.96□□□□□ -0.82
RABGGTA-217ENST00000560521 RXFP3Q9NSD7 469 aa9.96□□□□□ -0.82
RABGGTA-217ENST00000560521 SF3B1O75533 1304 aaKnown RBP eCLIP9.96□□□□□ -0.82
RABGGTA-217ENST00000560521 SPEGQ15772 3267 aa9.96□□□□□ -0.82
RABGGTA-217ENST00000560521 KIAA1549LQ6ZVL6 1849 aa9.96□□□□□ -0.82
RABGGTA-217ENST00000560521 CASTOR2A6NHX0 329 aa9.95□□□□□ -0.82
RABGGTA-217ENST00000560521 C1QTNF9BB2RNN3 333 aa9.95□□□□□ -0.82
RABGGTA-217ENST00000560521 K7ESF4 209 aa9.95□□□□□ -0.82
RABGGTA-217ENST00000560521 ZBTB39O15060 712 aa9.95□□□□□ -0.82
RABGGTA-217ENST00000560521 KIF4AO95239 1232 aa9.95□□□□□ -0.82
RABGGTA-217ENST00000560521 C1QTNF9P0C862 333 aa9.95□□□□□ -0.82
RABGGTA-217ENST00000560521 CEBPBP17676 345 aa9.95□□□□□ -0.82
RABGGTA-217ENST00000560521 IGFBP6P24592 240 aaPredicted RBP9.95□□□□□ -0.82
RABGGTA-217ENST00000560521 HOXC13P31276 330 aa9.95□□□□□ -0.82
RABGGTA-217ENST00000560521 CNR2P34972 360 aa9.95□□□□□ -0.82
RABGGTA-217ENST00000560521 QARSP47897 775 aaKnown RBP9.95□□□□□ -0.82
RABGGTA-217ENST00000560521 MBTD1Q05BQ5 628 aa9.95□□□□□ -0.82
RABGGTA-217ENST00000560521 TUSC3Q13454 348 aa9.95□□□□□ -0.82
RABGGTA-217ENST00000560521 EMC2Q15006 297 aa9.95□□□□□ -0.82
RABGGTA-217ENST00000560521 ACAP1Q15027 740 aa9.95□□□□□ -0.82
RABGGTA-217ENST00000560521 NTRK3Q16288 839 aa9.95□□□□□ -0.82
RABGGTA-217ENST00000560521 LONP2Q86WA8 852 aa9.95□□□□□ -0.82
RABGGTA-217ENST00000560521 IFNLR1Q8IU57 520 aaPredicted RBP9.95□□□□□ -0.82
RABGGTA-217ENST00000560521 MAP4K3Q8IVH8 894 aa9.95□□□□□ -0.82
RABGGTA-217ENST00000560521 TCP11Q8WWU5 503 aa9.95□□□□□ -0.82
RABGGTA-217ENST00000560521 TRMT61BQ9BVS5 477 aaKnown RBP9.95□□□□□ -0.82
RABGGTA-217ENST00000560521 TRIM6Q9C030 488 aaPredicted RBP9.95□□□□□ -0.82
RABGGTA-217ENST00000560521 AVENQ9NQS1 362 aaPredicted RBP9.95□□□□□ -0.82
RABGGTA-217ENST00000560521 XPNPEP1Q9NQW7 623 aa9.95□□□□□ -0.82
RABGGTA-217ENST00000560521 VPS54Q9P1Q0 977 aa9.95□□□□□ -0.82
RABGGTA-217ENST00000560521 PARP2Q9UGN5 583 aa9.95□□□□□ -0.82
RABGGTA-217ENST00000560521 ZMIZ1Q9ULJ6 1067 aa9.95□□□□□ -0.82
RABGGTA-217ENST00000560521 NAP1L2Q9ULW6 460 aaPredicted RBP9.95□□□□□ -0.82
RABGGTA-217ENST00000560521 PPME1Q9Y570 386 aa9.95□□□□□ -0.82
RABGGTA-217ENST00000560521 PTPRDP23468 1912 aa9.95□□□□□ -0.82
RABGGTA-217ENST00000560521 ASCC3Q8N3C0 2202 aaKnown RBP9.95□□□□□ -0.82
RABGGTA-217ENST00000560521 ZZEF1O43149 2961 aa9.95□□□□□ -0.82
RABGGTA-217ENST00000560521 ADAMTS9Q9P2N4 1935 aa9.94□□□□□ -0.82
RABGGTA-217ENST00000560521 ZMYM2Q9UBW7 1377 aa9.94□□□□□ -0.82
RABGGTA-217ENST00000560521 A0A1B0GUA9 196 aa9.94□□□□□ -0.82
RABGGTA-217ENST00000560521 INO80B-WBP1J3KQ70 363 aa9.94□□□□□ -0.82
RABGGTA-217ENST00000560521 B4GALT5O43286 388 aa9.94□□□□□ -0.82
RABGGTA-217ENST00000560521 FOXD2O60548 495 aaPredicted RBP9.94□□□□□ -0.82
RABGGTA-217ENST00000560521 KCNK5O95279 499 aa9.94□□□□□ -0.82
RABGGTA-217ENST00000560521 NPTXRO95502 500 aa9.94□□□□□ -0.82
RABGGTA-217ENST00000560521 P4HBP07237 508 aaKnown RBP9.94□□□□□ -0.82
RABGGTA-217ENST00000560521 ZNF806P0C7X5 589 aa9.94□□□□□ -0.82
RABGGTA-217ENST00000560521 PTPN2P17706 415 aa9.94□□□□□ -0.82
RABGGTA-217ENST00000560521 RFC5P40937 340 aa9.94□□□□□ -0.82
RABGGTA-217ENST00000560521 POU5F1BQ06416 359 aa9.94□□□□□ -0.82
RABGGTA-217ENST00000560521 NCBP1Q09161 790 aaKnown RBP9.94□□□□□ -0.82
RABGGTA-217ENST00000560521 PPP2R5CQ13362 524 aa9.94□□□□□ -0.82
RABGGTA-217ENST00000560521 SF3A2Q15428 464 aaKnown RBP9.94□□□□□ -0.82
RABGGTA-217ENST00000560521 NAB2Q15742 525 aa9.94□□□□□ -0.82
RABGGTA-217ENST00000560521 CCDC6Q16204 474 aa9.94□□□□□ -0.82
RABGGTA-217ENST00000560521 AASDHQ4L235 1098 aaPredicted RBP9.94□□□□□ -0.82
RABGGTA-217ENST00000560521 WDR44Q5JSH3 913 aa9.94□□□□□ -0.82
RABGGTA-217ENST00000560521 FAM78AQ5JUQ0 283 aa9.94□□□□□ -0.82
RABGGTA-217ENST00000560521 PRSS36Q5K4E3 855 aa9.94□□□□□ -0.82
RABGGTA-217ENST00000560521 HEATR6Q6AI08 1181 aaKnown RBP9.94□□□□□ -0.82
RABGGTA-217ENST00000560521 VITQ6UXI7 678 aa9.94□□□□□ -0.82
RABGGTA-217ENST00000560521 RTL10Q7L3V2 364 aa9.94□□□□□ -0.82
RABGGTA-217ENST00000560521 RASEFQ8IZ41 740 aa9.94□□□□□ -0.82
RABGGTA-217ENST00000560521 SPEM1Q8N4L4 309 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms