RNA–Protein interactions for RNA: ENST00000560166.1

CLPX-206, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 3

Gene CLPX, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-206ENST00000560166 CCDC144BQ3MJ40 725 aa6.89□□□□□ -1.31
CLPX-206ENST00000560166 COBLL1Q53SF7 1204 aa6.89□□□□□ -1.31
CLPX-206ENST00000560166 FOXR2Q6PJQ5 311 aa6.89□□□□□ -1.31
CLPX-206ENST00000560166 C17orf99Q6UX52 265 aa6.89□□□□□ -1.31
CLPX-206ENST00000560166 NECAB2Q7Z6G3 386 aa6.89□□□□□ -1.31
CLPX-206ENST00000560166 PLEKHH3Q7Z736 793 aa6.89□□□□□ -1.31
CLPX-206ENST00000560166 CKAP2LQ8IYA6 745 aa6.89□□□□□ -1.31
CLPX-206ENST00000560166 ANKRD13CQ8N6S4 541 aa6.89□□□□□ -1.31
CLPX-206ENST00000560166 POU5F2Q8N7G0 328 aa6.89□□□□□ -1.31
CLPX-206ENST00000560166 PDILTQ8N807 584 aa6.89□□□□□ -1.31
CLPX-206ENST00000560166 CEP120Q8N960 986 aa6.89□□□□□ -1.31
CLPX-206ENST00000560166 MLKLQ8NB16 471 aa6.89□□□□□ -1.31
CLPX-206ENST00000560166 SOCS4Q8WXH5 440 aa6.89□□□□□ -1.31
CLPX-206ENST00000560166 LARP4BQ92615 738 aaKnown RBP6.89□□□□□ -1.31
CLPX-206ENST00000560166 RAD54LQ92698 747 aa6.89□□□□□ -1.31
CLPX-206ENST00000560166 CCDC47Q96A33 483 aaKnown RBP6.89□□□□□ -1.31
CLPX-206ENST00000560166 SPACA7Q96KW9 195 aa6.89□□□□□ -1.31
CLPX-206ENST00000560166 FGD4Q96M96 766 aa6.89□□□□□ -1.31
CLPX-206ENST00000560166 DEFB118Q96PH6 123 aa6.89□□□□□ -1.31
CLPX-206ENST00000560166 C7orf25Q9BPX7 421 aa6.89□□□□□ -1.31
CLPX-206ENST00000560166 PORCNQ9H237 461 aa6.89□□□□□ -1.31
CLPX-206ENST00000560166 BLOC1S4Q9NUP1 217 aa6.89□□□□□ -1.31
CLPX-206ENST00000560166 STOML1Q9UBI4 398 aa6.89□□□□□ -1.31
CLPX-206ENST00000560166 PCDHA5Q9Y5H7 936 aa6.89□□□□□ -1.31
CLPX-206ENST00000560166 ASTN1O14525 1302 aa6.89□□□□□ -1.31
CLPX-206ENST00000560166 SYNGAP1Q96PV0 1343 aa6.89□□□□□ -1.31
CLPX-206ENST00000560166 ZNF236Q9UL36 1845 aa6.89□□□□□ -1.31
CLPX-206ENST00000560166 TCHHQ07283 1943 aa6.88□□□□□ -1.31
CLPX-206ENST00000560166 J3QW42 95 aa6.88□□□□□ -1.31
CLPX-206ENST00000560166 RHOBTB3O94955 611 aa6.88□□□□□ -1.31
CLPX-206ENST00000560166 EYA4O95677 639 aa6.88□□□□□ -1.31
CLPX-206ENST00000560166 CELA3AP09093 270 aa6.88□□□□□ -1.31
CLPX-206ENST00000560166 MYCLP12524 364 aaPredicted RBP6.88□□□□□ -1.31
CLPX-206ENST00000560166 CPB1P15086 417 aa6.88□□□□□ -1.31
CLPX-206ENST00000560166 ADORA2AP29274 412 aa6.88□□□□□ -1.31
CLPX-206ENST00000560166 CTGFP29279 349 aa6.88□□□□□ -1.31
CLPX-206ENST00000560166 CDC25AP30304 524 aa6.88□□□□□ -1.31
CLPX-206ENST00000560166 CNTN2Q02246 1040 aa6.88□□□□□ -1.31
CLPX-206ENST00000560166 PRKCZQ05513 592 aa6.88□□□□□ -1.31
CLPX-206ENST00000560166 ITGB3BPQ13352 177 aaPredicted RBP6.88□□□□□ -1.31
CLPX-206ENST00000560166 PNOCQ13519 176 aa6.88□□□□□ -1.31
CLPX-206ENST00000560166 MORC3Q14149 939 aa6.88□□□□□ -1.31
CLPX-206ENST00000560166 NEDD9Q14511 834 aa6.88□□□□□ -1.31
CLPX-206ENST00000560166 PERM1Q5SV97 790 aa6.88□□□□□ -1.31
CLPX-206ENST00000560166 NCAPH2Q6IBW4 605 aa6.88□□□□□ -1.31
CLPX-206ENST00000560166 METTL7BQ6UX53 244 aa6.88□□□□□ -1.31
CLPX-206ENST00000560166 HFE2Q6ZVN8 426 aa6.88□□□□□ -1.31
CLPX-206ENST00000560166 SV2BQ7L1I2 683 aa6.88□□□□□ -1.31
CLPX-206ENST00000560166 GPR142Q7Z601 462 aa6.88□□□□□ -1.31
CLPX-206ENST00000560166 GAS2L3Q86XJ1 694 aa6.88□□□□□ -1.31
CLPX-206ENST00000560166 CATSPER3Q86XQ3 398 aa6.88□□□□□ -1.31
CLPX-206ENST00000560166 C4orf19Q8IY42 314 aa6.88□□□□□ -1.31
CLPX-206ENST00000560166 ASAP3Q8TDY4 903 aa6.88□□□□□ -1.31
CLPX-206ENST00000560166 DIS3LQ8TF46 1054 aaKnown RBP6.88□□□□□ -1.31
CLPX-206ENST00000560166 SCFD2Q8WU76 684 aa6.88□□□□□ -1.31
CLPX-206ENST00000560166 EIF2AK1Q9BQI3 630 aaKnown RBP6.88□□□□□ -1.31
CLPX-206ENST00000560166 TIPINQ9BVW5 301 aa6.88□□□□□ -1.31
CLPX-206ENST00000560166 TRIM9Q9C026 710 aa6.88□□□□□ -1.31
CLPX-206ENST00000560166 UNC45AQ9H3U1 944 aa6.88□□□□□ -1.31
CLPX-206ENST00000560166 ZSWIM4Q9H7M6 989 aa6.88□□□□□ -1.31
CLPX-206ENST00000560166 VTA1Q9NP79 307 aa6.88□□□□□ -1.31
CLPX-206ENST00000560166 NRBP1Q9UHY1 535 aa6.88□□□□□ -1.31
CLPX-206ENST00000560166 DBR1Q9UK59 544 aaKnown RBP6.88□□□□□ -1.31
CLPX-206ENST00000560166 DNM3Q9UQ16 869 aa6.88□□□□□ -1.31
CLPX-206ENST00000560166 TLR6Q9Y2C9 796 aa6.88□□□□□ -1.31
CLPX-206ENST00000560166 PPME1Q9Y570 386 aa6.88□□□□□ -1.31
CLPX-206ENST00000560166 PRR19A6NJB7 356 aa6.87□□□□□ -1.31
CLPX-206ENST00000560166 IKBKBO14920 756 aa6.87□□□□□ -1.31
CLPX-206ENST00000560166 ADCY3O60266 1144 aa6.87□□□□□ -1.31
CLPX-206ENST00000560166 MED24O75448 989 aa6.87□□□□□ -1.31
CLPX-206ENST00000560166 SLITRK3O94933 977 aa6.87□□□□□ -1.31
CLPX-206ENST00000560166 RPN1P04843 607 aaKnown RBP6.87□□□□□ -1.31
CLPX-206ENST00000560166 HOXD8P13378 290 aaPredicted RBP6.87□□□□□ -1.31
CLPX-206ENST00000560166 QARSP47897 775 aaKnown RBP6.87□□□□□ -1.31
CLPX-206ENST00000560166 ZNF165P49910 485 aa6.87□□□□□ -1.31
CLPX-206ENST00000560166 PSMC5P62195 406 aa6.87□□□□□ -1.31
CLPX-206ENST00000560166 RBL2Q08999 1139 aa6.87□□□□□ -1.31
CLPX-206ENST00000560166 OLFML2BQ68BL8 750 aa6.87□□□□□ -1.31
CLPX-206ENST00000560166 MIS18BP1Q6P0N0 1132 aa6.87□□□□□ -1.31
CLPX-206ENST00000560166 MIER3Q7Z3K6 550 aa6.87□□□□□ -1.31
CLPX-206ENST00000560166 SYT2Q8N9I0 419 aaPredicted RBP6.87□□□□□ -1.31
CLPX-206ENST00000560166 USP6NLQ92738 828 aa6.87□□□□□ -1.31
CLPX-206ENST00000560166 ATP6V0A1Q93050 837 aa6.87□□□□□ -1.31
CLPX-206ENST00000560166 EAF1Q96JC9 268 aaPredicted RBP6.87□□□□□ -1.31
CLPX-206ENST00000560166 KRTAP17-1Q9BYP8 105 aa6.87□□□□□ -1.31
CLPX-206ENST00000560166 PANK2Q9BZ23 570 aa6.87□□□□□ -1.31
CLPX-206ENST00000560166 CEP44Q9C0F1 390 aa6.87□□□□□ -1.31
CLPX-206ENST00000560166 GRPEL1Q9HAV7 217 aa6.87□□□□□ -1.31
CLPX-206ENST00000560166 SLC9A2Q9UBY0 812 aa6.87□□□□□ -1.31
CLPX-206ENST00000560166 MAN1B1Q9UKM7 699 aa6.87□□□□□ -1.31
CLPX-206ENST00000560166 PCDHA10Q9Y5I2 948 aa6.87□□□□□ -1.31
CLPX-206ENST00000560166 RANBP2P49792 3224 aaKnown RBP6.86□□□□□ -1.31
CLPX-206ENST00000560166 IGSF9BQ9UPX0 1349 aa6.86□□□□□ -1.31
CLPX-206ENST00000560166 A0A096LPE4 126 aa6.86□□□□□ -1.31
CLPX-206ENST00000560166 IGKV6D-21A0A0A0MT36 114 aa6.86□□□□□ -1.31
CLPX-206ENST00000560166 A0A1W2PPZ6 126 aa6.86□□□□□ -1.31
CLPX-206ENST00000560166 FRMD3A2A2Y4 597 aa6.86□□□□□ -1.31
CLPX-206ENST00000560166 ZBTB42B2RXF5 422 aa6.86□□□□□ -1.31
CLPX-206ENST00000560166 NKRFO15226 690 aaKnown RBP eCLIP6.86□□□□□ -1.31
CLPX-206ENST00000560166 ATP9AO75110 1047 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms