RNA–Protein interactions for RNA: ENST00000559866.1

AC243562.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC243562.3, Length 1,212 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC243562.3-201ENST00000559866 RTKNQ9BST9 563 aa17.34■□□□□ 0.37
AC243562.3-201ENST00000559866 TTPALQ9BTX7 342 aa17.34■□□□□ 0.37
AC243562.3-201ENST00000559866 RALYQ9UKM9 306 aaKnown RBP17.34■□□□□ 0.37
AC243562.3-201ENST00000559866 TRIP11Q15643 1979 aa17.33■□□□□ 0.37
AC243562.3-201ENST00000559866 PRR5-ARHGAP8B1AHC4 643 aa17.33■□□□□ 0.36
AC243562.3-201ENST00000559866 ASAP2O43150 1006 aa17.33■□□□□ 0.36
AC243562.3-201ENST00000559866 GLRA2P23416 452 aa17.33■□□□□ 0.36
AC243562.3-201ENST00000559866 FCARP24071 287 aa17.33■□□□□ 0.36
AC243562.3-201ENST00000559866 HOXA9P31269 272 aa17.33■□□□□ 0.36
AC243562.3-201ENST00000559866 RPS9P46781 194 aaKnown RBP17.33■□□□□ 0.36
AC243562.3-201ENST00000559866 ARHGAP8P85298 464 aa17.33■□□□□ 0.36
AC243562.3-201ENST00000559866 AXDND1Q5T1B0 1012 aaPredicted RBP17.33■□□□□ 0.36
AC243562.3-201ENST00000559866 NCAPH2Q6IBW4 605 aa17.33■□□□□ 0.36
AC243562.3-201ENST00000559866 MCRS1Q96EZ8 462 aa17.33■□□□□ 0.36
AC243562.3-201ENST00000559866 TRIM6Q9C030 488 aaPredicted RBP17.33■□□□□ 0.36
AC243562.3-201ENST00000559866 SLKQ9H2G2 1235 aaPredicted RBP17.33■□□□□ 0.36
AC243562.3-201ENST00000559866 PARP2Q9UGN5 583 aa17.33■□□□□ 0.36
AC243562.3-201ENST00000559866 PPME1Q9Y570 386 aa17.33■□□□□ 0.36
AC243562.3-201ENST00000559866 DKC1O60832 514 aaKnown RBP eCLIP17.32■□□□□ 0.36
AC243562.3-201ENST00000559866 DEXIO95424 95 aa17.32■□□□□ 0.36
AC243562.3-201ENST00000559866 CEBPBP17676 345 aa17.32■□□□□ 0.36
AC243562.3-201ENST00000559866 SDHBP21912 280 aa17.32■□□□□ 0.36
AC243562.3-201ENST00000559866 MAGEA9P43362 315 aa17.32■□□□□ 0.36
AC243562.3-201ENST00000559866 PFKPQ01813 784 aa17.32■□□□□ 0.36
AC243562.3-201ENST00000559866 TUSC3Q13454 348 aa17.32■□□□□ 0.36
AC243562.3-201ENST00000559866 EPHA7Q15375 998 aa17.32■□□□□ 0.36
AC243562.3-201ENST00000559866 PABPC1LQ4VXU2 614 aaKnown RBP17.32■□□□□ 0.36
AC243562.3-201ENST00000559866 TANGO2Q6ICL3 276 aa17.32■□□□□ 0.36
AC243562.3-201ENST00000559866 GALNT17Q6IS24 598 aa17.32■□□□□ 0.36
AC243562.3-201ENST00000559866 SLC27A1Q6PCB7 646 aa17.32■□□□□ 0.36
AC243562.3-201ENST00000559866 POTEDQ86YR6 584 aa17.32■□□□□ 0.36
AC243562.3-201ENST00000559866 KCNJ14Q9UNX9 436 aa17.32■□□□□ 0.36
AC243562.3-201ENST00000559866 TPRP12270 2363 aaKnown RBP17.32■□□□□ 0.36
AC243562.3-201ENST00000559866 ZMYM2Q9UBW7 1377 aa17.31■□□□□ 0.36
AC243562.3-201ENST00000559866 NCANO14594 1321 aa17.31■□□□□ 0.36
AC243562.3-201ENST00000559866 A0A087WWV3 80 aa17.31■□□□□ 0.36
AC243562.3-201ENST00000559866 TBC1D4O60343 1298 aa17.31■□□□□ 0.36
AC243562.3-201ENST00000559866 EDN1P05305 212 aa17.31■□□□□ 0.36
AC243562.3-201ENST00000559866 ARL2P36404 184 aa17.31■□□□□ 0.36
AC243562.3-201ENST00000559866 EVCP57679 992 aa17.31■□□□□ 0.36
AC243562.3-201ENST00000559866 TOB2Q14106 344 aaPredicted RBP17.31■□□□□ 0.36
AC243562.3-201ENST00000559866 GRM2Q14416 872 aa17.31■□□□□ 0.36
AC243562.3-201ENST00000559866 EARS2Q5JPH6 523 aaKnown RBP17.31■□□□□ 0.36
AC243562.3-201ENST00000559866 PPM1JQ5JR12 505 aa17.31■□□□□ 0.36
AC243562.3-201ENST00000559866 EXOC8Q8IYI6 725 aa17.31■□□□□ 0.36
AC243562.3-201ENST00000559866 FAM177A1Q8N128 213 aaPredicted RBP17.31■□□□□ 0.36
AC243562.3-201ENST00000559866 BORCS6Q96GS4 357 aa17.31■□□□□ 0.36
AC243562.3-201ENST00000559866 LARP6Q9BRS8 491 aaKnown RBP17.31■□□□□ 0.36
AC243562.3-201ENST00000559866 GJB4Q9NTQ9 266 aa17.31■□□□□ 0.36
AC243562.3-201ENST00000559866 NDRG2Q9UN36 371 aaKnown RBP17.31■□□□□ 0.36
AC243562.3-201ENST00000559866 USP20Q9Y2K6 914 aa17.31■□□□□ 0.36
AC243562.3-201ENST00000559866 CHD8Q9HCK8 2581 aa17.31■□□□□ 0.36
AC243562.3-201ENST00000559866 RALGAPA1Q6GYQ0 2036 aa17.3■□□□□ 0.36
AC243562.3-201ENST00000559866 A0A1B0GUA9 196 aa17.3■□□□□ 0.36
AC243562.3-201ENST00000559866 FAM205CA6NFA0 338 aa17.3■□□□□ 0.36
AC243562.3-201ENST00000559866 XYLBO75191 536 aa17.3■□□□□ 0.36
AC243562.3-201ENST00000559866 ECI2O75521 394 aa17.3■□□□□ 0.36
AC243562.3-201ENST00000559866 POU2F2P09086 479 aa17.3■□□□□ 0.36
AC243562.3-201ENST00000559866 HOXC13P31276 330 aa17.3■□□□□ 0.36
AC243562.3-201ENST00000559866 OR1D2P34982 312 aa17.3■□□□□ 0.36
AC243562.3-201ENST00000559866 ADCY1Q08828 1119 aa17.3■□□□□ 0.36
AC243562.3-201ENST00000559866 DMWDQ09019 674 aa17.3■□□□□ 0.36
AC243562.3-201ENST00000559866 RAB33AQ14088 237 aa17.3■□□□□ 0.36
AC243562.3-201ENST00000559866 MXD4Q14582 209 aaPredicted RBP17.3■□□□□ 0.36
AC243562.3-201ENST00000559866 PCBP1Q15365 356 aaKnown RBP eCLIP17.3■□□□□ 0.36
AC243562.3-201ENST00000559866 CD300LGQ6UXG3 332 aa17.3■□□□□ 0.36
AC243562.3-201ENST00000559866 RUFY3Q7L099 469 aa17.3■□□□□ 0.36
AC243562.3-201ENST00000559866 KRT25Q7Z3Z0 450 aa17.3■□□□□ 0.36
AC243562.3-201ENST00000559866 SECISBP2LQ93073 1101 aaKnown RBP17.3■□□□□ 0.36
AC243562.3-201ENST00000559866 FAM20AQ96MK3 541 aa17.3■□□□□ 0.36
AC243562.3-201ENST00000559866 GMEB2Q9UKD1 530 aa17.3■□□□□ 0.36
AC243562.3-201ENST00000559866 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.29■□□□□ 0.36
AC243562.3-201ENST00000559866 GDF9O60383 454 aa17.29■□□□□ 0.36
AC243562.3-201ENST00000559866 SLITRK3O94933 977 aa17.29■□□□□ 0.36
AC243562.3-201ENST00000559866 RHOP08100 348 aa17.29■□□□□ 0.36
AC243562.3-201ENST00000559866 POU5F1BQ06416 359 aa17.29■□□□□ 0.36
AC243562.3-201ENST00000559866 SRSF5Q13243 272 aaKnown RBP17.29■□□□□ 0.36
AC243562.3-201ENST00000559866 TFDP1Q14186 410 aa17.29■□□□□ 0.36
AC243562.3-201ENST00000559866 ZNF852Q6ZMS4 543 aa17.29■□□□□ 0.36
AC243562.3-201ENST00000559866 TPH2Q8IWU9 490 aa17.29■□□□□ 0.36
AC243562.3-201ENST00000559866 OXER1Q8TDS5 423 aa17.29■□□□□ 0.36
AC243562.3-201ENST00000559866 CHRDQ9H2X0 955 aa17.29■□□□□ 0.36
AC243562.3-201ENST00000559866 ZSWIM4Q9H7M6 989 aa17.29■□□□□ 0.36
AC243562.3-201ENST00000559866 GPRC5CQ9NQ84 441 aa17.29■□□□□ 0.36
AC243562.3-201ENST00000559866 SNTG2Q9NY99 539 aa17.29■□□□□ 0.36
AC243562.3-201ENST00000559866 MTRRQ9UBK8 725 aa17.29■□□□□ 0.36
AC243562.3-201ENST00000559866 KCNH3Q9ULD8 1083 aa17.29■□□□□ 0.36
AC243562.3-201ENST00000559866 MRPS23Q9Y3D9 190 aaKnown RBP17.29■□□□□ 0.36
AC243562.3-201ENST00000559866 CYP46A1Q9Y6A2 500 aa17.29■□□□□ 0.36
AC243562.3-201ENST00000559866 I3L4J1 428 aa17.28■□□□□ 0.36
AC243562.3-201ENST00000559866 SLC30A4O14863 429 aa17.28■□□□□ 0.36
AC243562.3-201ENST00000559866 RECQL4O94761 1208 aa17.28■□□□□ 0.36
AC243562.3-201ENST00000559866 FGFR3P22607 806 aa17.28■□□□□ 0.36
AC243562.3-201ENST00000559866 GAS6Q14393 721 aa17.28■□□□□ 0.36
AC243562.3-201ENST00000559866 PRSS36Q5K4E3 855 aa17.28■□□□□ 0.36
AC243562.3-201ENST00000559866 PPP4R3AQ6IN85 833 aa17.28■□□□□ 0.36
AC243562.3-201ENST00000559866 OTUD6AQ7L8S5 288 aa17.28■□□□□ 0.36
AC243562.3-201ENST00000559866 NEK8Q86SG6 692 aa17.28■□□□□ 0.36
AC243562.3-201ENST00000559866 HACE1Q8IYU2 909 aa17.28■□□□□ 0.36
AC243562.3-201ENST00000559866 C3orf58Q8NDZ4 430 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms