RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 XBP1P17861 261 aa12.27□□□□□ -0.45
HERC1-204ENST00000559715 ANAPC15P60006 121 aa12.27□□□□□ -0.45
HERC1-204ENST00000559715 GPC5P78333 572 aa12.27□□□□□ -0.45
HERC1-204ENST00000559715 FOXK2Q01167 660 aa12.27□□□□□ -0.45
HERC1-204ENST00000559715 ECM1Q16610 540 aa12.27□□□□□ -0.45
HERC1-204ENST00000559715 FAM171A1Q5VUB5 890 aa12.27□□□□□ -0.45
HERC1-204ENST00000559715 GET4Q7L5D6 327 aaPredicted RBP12.27□□□□□ -0.45
HERC1-204ENST00000559715 MAEAQ7L5Y9 396 aa12.27□□□□□ -0.45
HERC1-204ENST00000559715 GRASPQ7Z6J2 395 aaPredicted RBP12.27□□□□□ -0.45
HERC1-204ENST00000559715 DIS3L2Q8IYB7 885 aaKnown RBP12.27□□□□□ -0.45
HERC1-204ENST00000559715 ITFG1Q8TB96 612 aa12.27□□□□□ -0.45
HERC1-204ENST00000559715 HASPINQ8TF76 798 aa12.27□□□□□ -0.45
HERC1-204ENST00000559715 FOXQ1Q9C009 403 aa12.27□□□□□ -0.45
HERC1-204ENST00000559715 TRIM6Q9C030 488 aaPredicted RBP12.27□□□□□ -0.45
HERC1-204ENST00000559715 POLD4Q9HCU8 107 aa12.27□□□□□ -0.45
HERC1-204ENST00000559715 ARHGEF3Q9NR81 526 aa12.27□□□□□ -0.45
HERC1-204ENST00000559715 PRMT7Q9NVM4 692 aaPredicted RBP12.27□□□□□ -0.45
HERC1-204ENST00000559715 SNTG2Q9NY99 539 aa12.27□□□□□ -0.45
HERC1-204ENST00000559715 PARP2Q9UGN5 583 aa12.27□□□□□ -0.45
HERC1-204ENST00000559715 R4GN57 208 aa12.27□□□□□ -0.45
HERC1-204ENST00000559715 CASTOR2A6NHX0 329 aa12.26□□□□□ -0.45
HERC1-204ENST00000559715 LRRIQ4A6NIV6 560 aa12.26□□□□□ -0.45
HERC1-204ENST00000559715 NRG2O14511 850 aaPredicted RBP12.26□□□□□ -0.45
HERC1-204ENST00000559715 MEFVO15553 781 aaPredicted RBP12.26□□□□□ -0.45
HERC1-204ENST00000559715 MARCH6O60337 910 aa12.26□□□□□ -0.45
HERC1-204ENST00000559715 TADA2AO75478 443 aa12.26□□□□□ -0.45
HERC1-204ENST00000559715 SP9P0CG40 484 aa12.26□□□□□ -0.45
HERC1-204ENST00000559715 FGFR3P22607 806 aa12.26□□□□□ -0.45
HERC1-204ENST00000559715 HOXA9P31269 272 aa12.26□□□□□ -0.45
HERC1-204ENST00000559715 NCBP1Q09161 790 aaKnown RBP12.26□□□□□ -0.45
HERC1-204ENST00000559715 RAB33AQ14088 237 aa12.26□□□□□ -0.45
HERC1-204ENST00000559715 NT5DC1Q5TFE4 455 aa12.26□□□□□ -0.45
HERC1-204ENST00000559715 NOSTRINQ8IVI9 506 aa12.26□□□□□ -0.45
HERC1-204ENST00000559715 C4orf32Q8N8J7 132 aa12.26□□□□□ -0.45
HERC1-204ENST00000559715 C3orf58Q8NDZ4 430 aa12.26□□□□□ -0.45
HERC1-204ENST00000559715 FGF13Q92913 245 aa12.26□□□□□ -0.45
HERC1-204ENST00000559715 PPP1R10Q96QC0 940 aaKnown RBP12.26□□□□□ -0.45
HERC1-204ENST00000559715 TTPALQ9BTX7 342 aa12.26□□□□□ -0.45
HERC1-204ENST00000559715 POLR3CQ9BUI4 534 aaPredicted RBP12.26□□□□□ -0.45
HERC1-204ENST00000559715 TUFT1Q9NNX1 390 aa12.26□□□□□ -0.45
HERC1-204ENST00000559715 HCFC1R1Q9NWW0 138 aa12.26□□□□□ -0.45
HERC1-204ENST00000559715 MTF2Q9Y483 593 aaPredicted RBP12.26□□□□□ -0.45
HERC1-204ENST00000559715 ZFP37Q9Y6Q3 630 aaPredicted RBP12.26□□□□□ -0.45
HERC1-204ENST00000559715 SF3B1O75533 1304 aaKnown RBP eCLIP12.26□□□□□ -0.45
HERC1-204ENST00000559715 ACKR2O00590 384 aa12.25□□□□□ -0.45
HERC1-204ENST00000559715 NR1I2O75469 434 aa12.25□□□□□ -0.45
HERC1-204ENST00000559715 POU2F2P09086 479 aa12.25□□□□□ -0.45
HERC1-204ENST00000559715 HNRNPA1P09651 372 aaKnown RBP eCLIP12.25□□□□□ -0.45
HERC1-204ENST00000559715 CYP11B2P19099 503 aa12.25□□□□□ -0.45
HERC1-204ENST00000559715 FSHRP23945 695 aa12.25□□□□□ -0.45
HERC1-204ENST00000559715 FZD5Q13467 585 aa12.25□□□□□ -0.45
HERC1-204ENST00000559715 PSMD5Q16401 504 aa12.25□□□□□ -0.45
HERC1-204ENST00000559715 DCLRE1AQ6PJP8 1040 aa12.25□□□□□ -0.45
HERC1-204ENST00000559715 ALKAL1Q6UXT8 129 aa12.25□□□□□ -0.45
HERC1-204ENST00000559715 ERMP1Q7Z2K6 904 aa12.25□□□□□ -0.45
HERC1-204ENST00000559715 C1orf210Q8IVY1 113 aa12.25□□□□□ -0.45
HERC1-204ENST00000559715 SUMF1Q8NBK3 374 aa12.25□□□□□ -0.45
HERC1-204ENST00000559715 PJA1Q8NG27 643 aa12.25□□□□□ -0.45
HERC1-204ENST00000559715 WASF1Q92558 559 aa12.25□□□□□ -0.45
HERC1-204ENST00000559715 SEMA4AQ9H3S1 761 aa12.25□□□□□ -0.45
HERC1-204ENST00000559715 PIDD1Q9HB75 910 aa12.25□□□□□ -0.45
HERC1-204ENST00000559715 DNMT3BQ9UBC3 853 aaKnown RBP12.25□□□□□ -0.45
HERC1-204ENST00000559715 CDH7Q9ULB5 785 aa12.25□□□□□ -0.45
HERC1-204ENST00000559715 SIT1Q9Y3P8 196 aa12.25□□□□□ -0.45
HERC1-204ENST00000559715 TMEM189-UBE2V1I3L0A0 370 aa12.24□□□□□ -0.45
HERC1-204ENST00000559715 TBC1D4O60343 1298 aa12.24□□□□□ -0.45
HERC1-204ENST00000559715 LMNAP02545 664 aaKnown RBP12.24□□□□□ -0.45
HERC1-204ENST00000559715 THP07101 528 aa12.24□□□□□ -0.45
HERC1-204ENST00000559715 C8AP07357 584 aa12.24□□□□□ -0.45
HERC1-204ENST00000559715 ATP2B1P20020 1258 aa12.24□□□□□ -0.45
HERC1-204ENST00000559715 RPA1P27694 616 aa12.24□□□□□ -0.45
HERC1-204ENST00000559715 OR1D2P34982 312 aa12.24□□□□□ -0.45
HERC1-204ENST00000559715 ID4P47928 161 aa12.24□□□□□ -0.45
HERC1-204ENST00000559715 CREMQ03060 361 aa12.24□□□□□ -0.45
HERC1-204ENST00000559715 SOX4Q06945 474 aaPredicted RBP12.24□□□□□ -0.45
HERC1-204ENST00000559715 UPP1Q16831 310 aa12.24□□□□□ -0.45
HERC1-204ENST00000559715 SLC5A9Q2M3M2 681 aa12.24□□□□□ -0.45
HERC1-204ENST00000559715 XKR4Q5GH76 650 aa12.24□□□□□ -0.45
HERC1-204ENST00000559715 SPECC1Q5M775 1068 aa12.24□□□□□ -0.45
HERC1-204ENST00000559715 ELMSAN1Q6PJG2 1045 aa12.24□□□□□ -0.45
HERC1-204ENST00000559715 PADI6Q6TGC4 694 aa12.24□□□□□ -0.45
HERC1-204ENST00000559715 NPAS3Q8IXF0 933 aa12.24□□□□□ -0.45
HERC1-204ENST00000559715 HACE1Q8IYU2 909 aa12.24□□□□□ -0.45
HERC1-204ENST00000559715 ZNF687Q8N1G0 1237 aa12.24□□□□□ -0.45
HERC1-204ENST00000559715 MCPH1Q8NEM0 835 aa12.24□□□□□ -0.45
HERC1-204ENST00000559715 RMDN1Q96DB5 314 aa12.24□□□□□ -0.45
HERC1-204ENST00000559715 NACC1Q96RE7 527 aa12.24□□□□□ -0.45
HERC1-204ENST00000559715 KIFC3Q9BVG8 833 aa12.24□□□□□ -0.45
HERC1-204ENST00000559715 PLA2G2FQ9BZM2 168 aa12.24□□□□□ -0.45
HERC1-204ENST00000559715 PTPRHQ9HD43 1115 aa12.24□□□□□ -0.45
HERC1-204ENST00000559715 MTRRQ9UBK8 725 aa12.24□□□□□ -0.45
HERC1-204ENST00000559715 CACNA1BQ00975 2339 aa12.23□□□□□ -0.45
HERC1-204ENST00000559715 CHD6Q8TD26 2715 aa12.23□□□□□ -0.45
HERC1-204ENST00000559715 ABLIM1O14639 778 aa12.23□□□□□ -0.45
HERC1-204ENST00000559715 N4BP3O15049 544 aa12.23□□□□□ -0.45
HERC1-204ENST00000559715 CCL16O15467 120 aa12.23□□□□□ -0.45
HERC1-204ENST00000559715 PRKCBP05771 671 aa12.23□□□□□ -0.45
HERC1-204ENST00000559715 MCM7P33993 719 aa12.23□□□□□ -0.45
HERC1-204ENST00000559715 NAMPTP43490 491 aa12.23□□□□□ -0.45
HERC1-204ENST00000559715 RBM25P49756 843 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms