RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 EFEMP2O95967 443 aa13.79□□□□□ -0.2
LRRC28-214ENST00000559433 CNPP09543 421 aaKnown RBP13.79□□□□□ -0.2
LRRC28-214ENST00000559433 EPCAMP16422 314 aa13.79□□□□□ -0.2
LRRC28-214ENST00000559433 PROZP22891 400 aa13.79□□□□□ -0.2
LRRC28-214ENST00000559433 DDIT3P35638 169 aa13.79□□□□□ -0.2
LRRC28-214ENST00000559433 MATR3P43243 847 aaKnown RBP eCLIP13.79□□□□□ -0.2
LRRC28-214ENST00000559433 NASPP49321 788 aaPredicted RBP13.79□□□□□ -0.2
LRRC28-214ENST00000559433 ITIH3Q06033 890 aa13.79□□□□□ -0.2
LRRC28-214ENST00000559433 NOLC1Q14978 699 aaKnown RBP eCLIP13.79□□□□□ -0.2
LRRC28-214ENST00000559433 RRAGBQ5VZM2 374 aa13.79□□□□□ -0.2
LRRC28-214ENST00000559433 FUT10Q6P4F1 479 aa13.79□□□□□ -0.2
LRRC28-214ENST00000559433 HAUS6Q7Z4H7 955 aa13.79□□□□□ -0.2
LRRC28-214ENST00000559433 RNF168Q8IYW5 571 aaPredicted RBP13.79□□□□□ -0.2
LRRC28-214ENST00000559433 HASPINQ8TF76 798 aa13.79□□□□□ -0.2
LRRC28-214ENST00000559433 SLC22A17Q8WUG5 538 aa13.79□□□□□ -0.2
LRRC28-214ENST00000559433 KHSRPQ92945 711 aaKnown RBP eCLIP13.79□□□□□ -0.2
LRRC28-214ENST00000559433 B3GALT6Q96L58 329 aa13.79□□□□□ -0.2
LRRC28-214ENST00000559433 KLHL5Q96PQ7 755 aa13.79□□□□□ -0.2
LRRC28-214ENST00000559433 PHF7Q9BWX1 381 aaPredicted RBP13.79□□□□□ -0.2
LRRC28-214ENST00000559433 S1PR5Q9H228 398 aa13.79□□□□□ -0.2
LRRC28-214ENST00000559433 TOPORSQ9NS56 1045 aaPredicted RBP13.79□□□□□ -0.2
LRRC28-214ENST00000559433 DZANK1Q9NVP4 752 aa13.79□□□□□ -0.2
LRRC28-214ENST00000559433 DPP7Q9UHL4 492 aa13.79□□□□□ -0.2
LRRC28-214ENST00000559433 VWA8A3KMH1 1905 aa13.78□□□□□ -0.2
LRRC28-214ENST00000559433 ABLIM1O14639 778 aa13.78□□□□□ -0.2
LRRC28-214ENST00000559433 LILRB3O75022 631 aa13.78□□□□□ -0.2
LRRC28-214ENST00000559433 TOM1L1O75674 476 aa13.78□□□□□ -0.2
LRRC28-214ENST00000559433 KIF4AO95239 1232 aa13.78□□□□□ -0.2
LRRC28-214ENST00000559433 BRD1O95696 1058 aa13.78□□□□□ -0.2
LRRC28-214ENST00000559433 ZSCAN22P10073 491 aaPredicted RBP13.78□□□□□ -0.2
LRRC28-214ENST00000559433 PDIA4P13667 645 aaKnown RBP13.78□□□□□ -0.2
LRRC28-214ENST00000559433 COL9A1P20849 921 aa13.78□□□□□ -0.2
LRRC28-214ENST00000559433 SCP2P22307 547 aa13.78□□□□□ -0.2
LRRC28-214ENST00000559433 ZNF131P52739 623 aa13.78□□□□□ -0.2
LRRC28-214ENST00000559433 DSG1Q02413 1049 aa13.78□□□□□ -0.2
LRRC28-214ENST00000559433 CBX2Q14781 532 aaPredicted RBP13.78□□□□□ -0.2
LRRC28-214ENST00000559433 NAB2Q15742 525 aa13.78□□□□□ -0.2
LRRC28-214ENST00000559433 ATAT1Q5SQI0 421 aa13.78□□□□□ -0.2
LRRC28-214ENST00000559433 ZPBP2Q6X784 338 aa13.78□□□□□ -0.2
LRRC28-214ENST00000559433 LINC00301Q8NCQ3 95 aa13.78□□□□□ -0.2
LRRC28-214ENST00000559433 SUSD6Q92537 303 aa13.78□□□□□ -0.2
LRRC28-214ENST00000559433 ZBTB45Q96K62 511 aaPredicted RBP13.78□□□□□ -0.2
LRRC28-214ENST00000559433 RIPOR3Q96MK2 946 aa13.78□□□□□ -0.2
LRRC28-214ENST00000559433 NECTIN4Q96NY8 510 aa13.78□□□□□ -0.2
LRRC28-214ENST00000559433 ACAP3Q96P50 834 aa13.78□□□□□ -0.2
LRRC28-214ENST00000559433 PPP1R10Q96QC0 940 aaKnown RBP13.78□□□□□ -0.2
LRRC28-214ENST00000559433 GPR62Q9BZJ7 368 aa13.78□□□□□ -0.2
LRRC28-214ENST00000559433 TSHZ2Q9NRE2 1034 aa13.78□□□□□ -0.2
LRRC28-214ENST00000559433 TFIP11Q9UBB9 837 aaKnown RBP13.78□□□□□ -0.2
LRRC28-214ENST00000559433 NR2E1Q9Y466 385 aa13.78□□□□□ -0.2
LRRC28-214ENST00000559433 SF3B1O75533 1304 aaKnown RBP eCLIP13.78□□□□□ -0.2
LRRC28-214ENST00000559433 MTCL1Q9Y4B5 1905 aaKnown RBP13.78□□□□□ -0.2
LRRC28-214ENST00000559433 C2orf16Q68DN1 1984 aa13.78□□□□□ -0.2
LRRC28-214ENST00000559433 SMIM28A0A1B0GU29 152 aa13.77□□□□□ -0.21
LRRC28-214ENST00000559433 HNRNPDLO14979 420 aaKnown RBP13.77□□□□□ -0.21
LRRC28-214ENST00000559433 SPTLC2O15270 562 aa13.77□□□□□ -0.21
LRRC28-214ENST00000559433 CLDN3O15551 220 aa13.77□□□□□ -0.21
LRRC28-214ENST00000559433 TRAK2O60296 914 aa13.77□□□□□ -0.21
LRRC28-214ENST00000559433 GPR37L1O60883 481 aa13.77□□□□□ -0.21
LRRC28-214ENST00000559433 F13A1P00488 732 aa13.77□□□□□ -0.21
LRRC28-214ENST00000559433 ADH1AP07327 375 aa13.77□□□□□ -0.21
LRRC28-214ENST00000559433 STAT6P42226 847 aa13.77□□□□□ -0.21
LRRC28-214ENST00000559433 MTHFRP42898 656 aa13.77□□□□□ -0.21
LRRC28-214ENST00000559433 LIG4P49917 911 aa13.77□□□□□ -0.21
LRRC28-214ENST00000559433 CLCN4P51793 760 aa13.77□□□□□ -0.21
LRRC28-214ENST00000559433 USP41Q3LFD5 358 aa13.77□□□□□ -0.21
LRRC28-214ENST00000559433 FOXD4L6Q3SYB3 417 aaPredicted RBP13.77□□□□□ -0.21
LRRC28-214ENST00000559433 RARS2Q5T160 578 aaKnown RBP13.77□□□□□ -0.21
LRRC28-214ENST00000559433 KIAA0319Q5VV43 1072 aa13.77□□□□□ -0.21
LRRC28-214ENST00000559433 FOXD4L3Q6VB84 417 aaPredicted RBP13.77□□□□□ -0.21
LRRC28-214ENST00000559433 CCDC73Q6ZRK6 1079 aa13.77□□□□□ -0.21
LRRC28-214ENST00000559433 DYMQ7RTS9 669 aa13.77□□□□□ -0.21
LRRC28-214ENST00000559433 RNF135Q8IUD6 432 aa13.77□□□□□ -0.21
LRRC28-214ENST00000559433 C12orf76Q8N812 135 aaPredicted RBP13.77□□□□□ -0.21
LRRC28-214ENST00000559433 RIN2Q8WYP3 895 aaPredicted RBP13.77□□□□□ -0.21
LRRC28-214ENST00000559433 SNX27Q96L92 541 aa13.77□□□□□ -0.21
LRRC28-214ENST00000559433 UROC1Q96N76 676 aa13.77□□□□□ -0.21
LRRC28-214ENST00000559433 ADAM7Q9H2U9 754 aa13.77□□□□□ -0.21
LRRC28-214ENST00000559433 CHST7Q9NS84 486 aa13.77□□□□□ -0.21
LRRC28-214ENST00000559433 TBX20Q9UMR3 447 aa13.77□□□□□ -0.21
LRRC28-214ENST00000559433 DENND4AQ7Z401 1863 aa13.76□□□□□ -0.21
LRRC28-214ENST00000559433 FAM86C2PA6NEL3 165 aa13.76□□□□□ -0.21
LRRC28-214ENST00000559433 TEX28O15482 410 aa13.76□□□□□ -0.21
LRRC28-214ENST00000559433 YEATS4O95619 227 aa13.76□□□□□ -0.21
LRRC28-214ENST00000559433 NMT1P30419 496 aaKnown RBP13.76□□□□□ -0.21
LRRC28-214ENST00000559433 CREMQ03060 361 aa13.76□□□□□ -0.21
LRRC28-214ENST00000559433 MCL1Q07820 350 aa13.76□□□□□ -0.21
LRRC28-214ENST00000559433 SEZ6Q53EL9 994 aa13.76□□□□□ -0.21
LRRC28-214ENST00000559433 ALKAL1Q6UXT8 129 aa13.76□□□□□ -0.21
LRRC28-214ENST00000559433 SV2BQ7L1I2 683 aa13.76□□□□□ -0.21
LRRC28-214ENST00000559433 DDX12PQ92771 950 aa13.76□□□□□ -0.21
LRRC28-214ENST00000559433 KCNN1Q92952 543 aa13.76□□□□□ -0.21
LRRC28-214ENST00000559433 FBXL18Q96ME1 805 aa13.76□□□□□ -0.21
LRRC28-214ENST00000559433 LRFN3Q9BTN0 628 aa13.76□□□□□ -0.21
LRRC28-214ENST00000559433 PANK2Q9BZ23 570 aa13.76□□□□□ -0.21
LRRC28-214ENST00000559433 SFXN1Q9H9B4 322 aa13.76□□□□□ -0.21
LRRC28-214ENST00000559433 GOLGA2P5Q9HBQ8 144 aa13.76□□□□□ -0.21
LRRC28-214ENST00000559433 RXFP1Q9HBX9 757 aa13.76□□□□□ -0.21
LRRC28-214ENST00000559433 CDH22Q9UJ99 828 aa13.76□□□□□ -0.21
LRRC28-214ENST00000559433 A0A087X0B3 334 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms