RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 CETN3O15182 167 aa16.11■□□□□ 0.17
SNRPA1-207ENST00000559309 GJB5O95377 273 aa16.11■□□□□ 0.17
SNRPA1-207ENST00000559309 AMHP03971 560 aa16.11■□□□□ 0.17
SNRPA1-207ENST00000559309 LINC00271P0C7V0 271 aa16.11■□□□□ 0.17
SNRPA1-207ENST00000559309 ITGA4P13612 1032 aa16.11■□□□□ 0.17
SNRPA1-207ENST00000559309 ZNF18P17022 549 aa16.11■□□□□ 0.17
SNRPA1-207ENST00000559309 AKAP5P24588 427 aa16.11■□□□□ 0.17
SNRPA1-207ENST00000559309 PSMC2P35998 433 aaKnown RBP16.11■□□□□ 0.17
SNRPA1-207ENST00000559309 CYP2J2P51589 502 aa16.11■□□□□ 0.17
SNRPA1-207ENST00000559309 AFF1P51825 1210 aaKnown RBP16.11■□□□□ 0.17
SNRPA1-207ENST00000559309 CYP24A1Q07973 514 aa16.11■□□□□ 0.17
SNRPA1-207ENST00000559309 HSP90AA2PQ14568 343 aaPredicted RBP16.11■□□□□ 0.17
SNRPA1-207ENST00000559309 PSMD6Q15008 389 aa16.11■□□□□ 0.17
SNRPA1-207ENST00000559309 CD302Q8IX05 232 aa16.11■□□□□ 0.17
SNRPA1-207ENST00000559309 TDHQ8IZJ6 230 aa16.11■□□□□ 0.17
SNRPA1-207ENST00000559309 CSGALNACT2Q8N6G5 542 aa16.11■□□□□ 0.17
SNRPA1-207ENST00000559309 PARD3BQ8TEW8 1205 aa16.11■□□□□ 0.17
SNRPA1-207ENST00000559309 ZMAT2Q96NC0 199 aaKnown RBP16.11■□□□□ 0.17
SNRPA1-207ENST00000559309 ACAP3Q96P50 834 aa16.11■□□□□ 0.17
SNRPA1-207ENST00000559309 PPP1R10Q96QC0 940 aaKnown RBP16.11■□□□□ 0.17
SNRPA1-207ENST00000559309 FAM213AQ9BRX8 229 aa16.11■□□□□ 0.17
SNRPA1-207ENST00000559309 CCDC94Q9BW85 323 aaPredicted RBP16.11■□□□□ 0.17
SNRPA1-207ENST00000559309 TRIM6Q9C030 488 aaPredicted RBP16.11■□□□□ 0.17
SNRPA1-207ENST00000559309 RSAD1Q9HA92 442 aa16.11■□□□□ 0.17
SNRPA1-207ENST00000559309 MIOSQ9NXC5 875 aa16.11■□□□□ 0.17
SNRPA1-207ENST00000559309 TDRD15B5MCY1 1934 aaKnown RBP16.11■□□□□ 0.17
SNRPA1-207ENST00000559309 GBF1Q92538 1859 aa16.1■□□□□ 0.17
SNRPA1-207ENST00000559309 GOLGA8IPA6NC78 632 aa16.1■□□□□ 0.17
SNRPA1-207ENST00000559309 ARL5CA6NH57 179 aa16.1■□□□□ 0.17
SNRPA1-207ENST00000559309 ZNF233A6NK53 670 aa16.1■□□□□ 0.17
SNRPA1-207ENST00000559309 GOLGA8JA6NMD2 632 aa16.1■□□□□ 0.17
SNRPA1-207ENST00000559309 DLL1O00548 723 aa16.1■□□□□ 0.17
SNRPA1-207ENST00000559309 HOXA2O43364 376 aa16.1■□□□□ 0.17
SNRPA1-207ENST00000559309 EXOC3O60645 756 aa16.1■□□□□ 0.17
SNRPA1-207ENST00000559309 CXCL8P10145 99 aa16.1■□□□□ 0.17
SNRPA1-207ENST00000559309 ZNF165P49910 485 aa16.1■□□□□ 0.17
SNRPA1-207ENST00000559309 MYL5Q02045 173 aa16.1■□□□□ 0.17
SNRPA1-207ENST00000559309 DSC1Q08554 894 aa16.1■□□□□ 0.17
SNRPA1-207ENST00000559309 TMEM132AQ24JP5 1023 aa16.1■□□□□ 0.17
SNRPA1-207ENST00000559309 FRMD5Q7Z6J6 570 aa16.1■□□□□ 0.17
SNRPA1-207ENST00000559309 NT5DC4Q86YG4 428 aa16.1■□□□□ 0.17
SNRPA1-207ENST00000559309 HACE1Q8IYU2 909 aa16.1■□□□□ 0.17
SNRPA1-207ENST00000559309 CXorf38Q8TB03 319 aa16.1■□□□□ 0.17
SNRPA1-207ENST00000559309 TMC2Q8TDI7 906 aa16.1■□□□□ 0.17
SNRPA1-207ENST00000559309 SRRTQ9BXP5 876 aaKnown RBP16.1■□□□□ 0.17
SNRPA1-207ENST00000559309 TMEM117Q9H0C3 514 aa16.1■□□□□ 0.17
SNRPA1-207ENST00000559309 THAP9Q9H5L6 903 aa16.1■□□□□ 0.17
SNRPA1-207ENST00000559309 CBX8Q9HC52 389 aa16.1■□□□□ 0.17
SNRPA1-207ENST00000559309 DERAQ9Y315 318 aa16.1■□□□□ 0.17
SNRPA1-207ENST00000559309 C2CD2Q9Y426 696 aa16.1■□□□□ 0.17
SNRPA1-207ENST00000559309 PCDHB7Q9Y5E2 793 aa16.1■□□□□ 0.17
SNRPA1-207ENST00000559309 SMIM28A0A1B0GU29 152 aa16.09■□□□□ 0.17
SNRPA1-207ENST00000559309 LACTBL1A8MY62 500 aa16.09■□□□□ 0.17
SNRPA1-207ENST00000559309 IL18RAPO95256 599 aa16.09■□□□□ 0.17
SNRPA1-207ENST00000559309 FGFR1P11362 822 aa16.09■□□□□ 0.17
SNRPA1-207ENST00000559309 KCNJ6P48051 423 aa16.09■□□□□ 0.17
SNRPA1-207ENST00000559309 OSTNP61366 133 aa16.09■□□□□ 0.17
SNRPA1-207ENST00000559309 C15orf39Q6ZRI6 1047 aa16.09■□□□□ 0.17
SNRPA1-207ENST00000559309 APTXQ7Z2E3 356 aaKnown RBP16.09■□□□□ 0.17
SNRPA1-207ENST00000559309 HERC6Q8IVU3 1022 aa16.09■□□□□ 0.17
SNRPA1-207ENST00000559309 TRIM59Q8IWR1 403 aa16.09■□□□□ 0.17
SNRPA1-207ENST00000559309 DEFB123Q8N688 67 aa16.09■□□□□ 0.17
SNRPA1-207ENST00000559309 FAM200AQ8TCP9 573 aa16.09■□□□□ 0.17
SNRPA1-207ENST00000559309 NOC3LQ8WTT2 800 aaKnown RBP16.09■□□□□ 0.17
SNRPA1-207ENST00000559309 ZFP42Q96MM3 310 aa16.09■□□□□ 0.17
SNRPA1-207ENST00000559309 UBE2OQ9C0C9 1292 aaKnown RBP16.09■□□□□ 0.17
SNRPA1-207ENST00000559309 NAT10Q9H0A0 1025 aaKnown RBP16.09■□□□□ 0.17
SNRPA1-207ENST00000559309 MTIF3Q9H2K0 278 aaKnown RBP16.09■□□□□ 0.17
SNRPA1-207ENST00000559309 RPF1Q9H9Y2 349 aaKnown RBP16.09■□□□□ 0.17
SNRPA1-207ENST00000559309 TOPORSQ9NS56 1045 aaPredicted RBP16.09■□□□□ 0.17
SNRPA1-207ENST00000559309 RBAKQ9NYW8 714 aaPredicted RBP16.09■□□□□ 0.17
SNRPA1-207ENST00000559309 PLAGL2Q9UPG8 496 aa16.09■□□□□ 0.17
SNRPA1-207ENST00000559309 NFE2L3Q9Y4A8 694 aa16.09■□□□□ 0.17
SNRPA1-207ENST00000559309 SLC4A7Q9Y6M7 1214 aa16.09■□□□□ 0.17
SNRPA1-207ENST00000559309 KIAA1671Q9BY89 1806 aa16.09■□□□□ 0.17
SNRPA1-207ENST00000559309 PTPRJQ12913 1337 aa16.09■□□□□ 0.17
SNRPA1-207ENST00000559309 UNC80Q8N2C7 3258 aa16.09■□□□□ 0.17
SNRPA1-207ENST00000559309 LRRC10BA6NIK2 292 aa16.08■□□□□ 0.16
SNRPA1-207ENST00000559309 B4GALT3O60512 393 aa16.08■□□□□ 0.16
SNRPA1-207ENST00000559309 GNA14O95837 355 aa16.08■□□□□ 0.16
SNRPA1-207ENST00000559309 HARSP12081 509 aaKnown RBP16.08■□□□□ 0.16
SNRPA1-207ENST00000559309 CYP3A5P20815 502 aa16.08■□□□□ 0.16
SNRPA1-207ENST00000559309 MLH1P40692 756 aa16.08■□□□□ 0.16
SNRPA1-207ENST00000559309 BFSP1Q12934 665 aa16.08■□□□□ 0.16
SNRPA1-207ENST00000559309 SURF1Q15526 300 aa16.08■□□□□ 0.16
SNRPA1-207ENST00000559309 INTS8Q75QN2 995 aaKnown RBP16.08■□□□□ 0.16
SNRPA1-207ENST00000559309 TMCO2Q7Z6W1 182 aaPredicted RBP16.08■□□□□ 0.16
SNRPA1-207ENST00000559309 EFCAB13Q8IY85 973 aa16.08■□□□□ 0.16
SNRPA1-207ENST00000559309 FAM186BQ8IYM0 893 aa16.08■□□□□ 0.16
SNRPA1-207ENST00000559309 SLC35C1Q96A29 364 aa16.08■□□□□ 0.16
SNRPA1-207ENST00000559309 EEF2KMTQ96G04 330 aa16.08■□□□□ 0.16
SNRPA1-207ENST00000559309 GAD1Q99259 594 aa16.08■□□□□ 0.16
SNRPA1-207ENST00000559309 PDE11AQ9HCR9 933 aa16.08■□□□□ 0.16
SNRPA1-207ENST00000559309 SAMSN1Q9NSI8 373 aaKnown RBP16.08■□□□□ 0.16
SNRPA1-207ENST00000559309 STXBP5LQ9Y2K9 1186 aa16.08■□□□□ 0.16
SNRPA1-207ENST00000559309 FRMD4BQ9Y2L6 1034 aa16.08■□□□□ 0.16
SNRPA1-207ENST00000559309 LRRIQ3A6PVS8 624 aaPredicted RBP16.07■□□□□ 0.16
SNRPA1-207ENST00000559309 PMM2O15305 246 aa16.07■□□□□ 0.16
SNRPA1-207ENST00000559309 ATP2A2P16615 1042 aaKnown RBP16.07■□□□□ 0.16
SNRPA1-207ENST00000559309 MATR3P43243 847 aaKnown RBP eCLIP16.07■□□□□ 0.161e-7■■□□□ 11.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms