RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 MATR3P43243 847 aaKnown RBP eCLIP11.88□□□□□ -0.51
TPM1-217ENST00000559108 CYP2J2P51589 502 aa11.88□□□□□ -0.51
TPM1-217ENST00000559108 NFKBIBQ15653 356 aa11.88□□□□□ -0.51
TPM1-217ENST00000559108 CENPPQ6IPU0 288 aa11.88□□□□□ -0.51
TPM1-217ENST00000559108 CAVIN1Q6NZI2 390 aaKnown RBP11.88□□□□□ -0.51
TPM1-217ENST00000559108 ARMCX5Q6P1M9 558 aa11.88□□□□□ -0.51
TPM1-217ENST00000559108 GLB1LQ6UWU2 654 aa11.88□□□□□ -0.51
TPM1-217ENST00000559108 CD300LGQ6UXG3 332 aa11.88□□□□□ -0.51
TPM1-217ENST00000559108 FAM43BQ6ZT52 329 aaPredicted RBP11.88□□□□□ -0.51
TPM1-217ENST00000559108 C12orf56Q8IXR9 622 aa11.88□□□□□ -0.51
TPM1-217ENST00000559108 CLP1Q92989 425 aaKnown RBP11.88□□□□□ -0.51
TPM1-217ENST00000559108 PGBD4Q96DM1 585 aa11.88□□□□□ -0.51
TPM1-217ENST00000559108 FBXL18Q96ME1 805 aa11.88□□□□□ -0.51
TPM1-217ENST00000559108 DUSP9Q99956 384 aaKnown RBP11.88□□□□□ -0.51
TPM1-217ENST00000559108 FAM213AQ9BRX8 229 aa11.88□□□□□ -0.51
TPM1-217ENST00000559108 TMEM206Q9H813 350 aa11.88□□□□□ -0.51
TPM1-217ENST00000559108 RMND1Q9NWS8 449 aa11.88□□□□□ -0.51
TPM1-217ENST00000559108 MARCH5Q9NX47 278 aa11.88□□□□□ -0.51
TPM1-217ENST00000559108 CNTN3Q9P232 1028 aa11.88□□□□□ -0.51
TPM1-217ENST00000559108 TUBGCP4Q9UGJ1 667 aa11.88□□□□□ -0.51
TPM1-217ENST00000559108 EXOC7Q9UPT5 735 aa11.88□□□□□ -0.51
TPM1-217ENST00000559108 TRAF3IP3Q9Y228 551 aa11.88□□□□□ -0.51
TPM1-217ENST00000559108 GIT1Q9Y2X7 761 aa11.88□□□□□ -0.51
TPM1-217ENST00000559108 SMIM28A0A1B0GU29 152 aa11.87□□□□□ -0.51
TPM1-217ENST00000559108 NT5C1B-RDH14C9J2C7 533 aa11.87□□□□□ -0.51
TPM1-217ENST00000559108 PDXKO00764 312 aa11.87□□□□□ -0.51
TPM1-217ENST00000559108 PPEF2O14830 753 aa11.87□□□□□ -0.51
TPM1-217ENST00000559108 NR3C1P04150 777 aa11.87□□□□□ -0.51
TPM1-217ENST00000559108 CLTAP09496 248 aa11.87□□□□□ -0.51
TPM1-217ENST00000559108 DNAJB1P25685 340 aa11.87□□□□□ -0.51
TPM1-217ENST00000559108 ABCD1P33897 745 aa11.87□□□□□ -0.51
TPM1-217ENST00000559108 SLC11A1P49279 550 aa11.87□□□□□ -0.51
TPM1-217ENST00000559108 ERVK-21P61565 698 aa11.87□□□□□ -0.51
TPM1-217ENST00000559108 GRIN2CQ14957 1233 aa11.87□□□□□ -0.51
TPM1-217ENST00000559108 RAB30Q15771 203 aa11.87□□□□□ -0.51
TPM1-217ENST00000559108 ZBTB6Q15916 424 aa11.87□□□□□ -0.51
TPM1-217ENST00000559108 C1orf220Q5T0J3 134 aa11.87□□□□□ -0.51
TPM1-217ENST00000559108 PPP2R2DQ66LE6 453 aa11.87□□□□□ -0.51
TPM1-217ENST00000559108 ANKRD40Q6AI12 368 aa11.87□□□□□ -0.51
TPM1-217ENST00000559108 TTI2Q6NXR4 508 aa11.87□□□□□ -0.51
TPM1-217ENST00000559108 STXBP4Q6ZWJ1 553 aa11.87□□□□□ -0.51
TPM1-217ENST00000559108 BRSK2Q8IWQ3 736 aa11.87□□□□□ -0.51
TPM1-217ENST00000559108 ZC3H3Q8IXZ2 948 aaKnown RBP11.87□□□□□ -0.51
TPM1-217ENST00000559108 COLGALT2Q8IYK4 626 aa11.87□□□□□ -0.51
TPM1-217ENST00000559108 LRRC43Q8N309 656 aa11.87□□□□□ -0.51
TPM1-217ENST00000559108 FIBCD1Q8N539 461 aa11.87□□□□□ -0.51
TPM1-217ENST00000559108 C3orf58Q8NDZ4 430 aa11.87□□□□□ -0.51
TPM1-217ENST00000559108 FAM161BQ96MY7 647 aa11.87□□□□□ -0.51
TPM1-217ENST00000559108 ACAP3Q96P50 834 aa11.87□□□□□ -0.51
TPM1-217ENST00000559108 CCDC94Q9BW85 323 aaPredicted RBP11.87□□□□□ -0.51
TPM1-217ENST00000559108 TOPORSQ9NS56 1045 aaPredicted RBP11.87□□□□□ -0.51
TPM1-217ENST00000559108 MSRAQ9UJ68 235 aa11.87□□□□□ -0.51
TPM1-217ENST00000559108 CTNND2Q9UQB3 1225 aa11.87□□□□□ -0.51
TPM1-217ENST00000559108 TRANK1O15050 2925 aa11.87□□□□□ -0.51
TPM1-217ENST00000559108 MYO9BQ13459 2157 aa11.86□□□□□ -0.51
TPM1-217ENST00000559108 CASTOR2A6NHX0 329 aa11.86□□□□□ -0.51
TPM1-217ENST00000559108 EXTL3O43909 919 aa11.86□□□□□ -0.51
TPM1-217ENST00000559108 AKAP3O75969 853 aa11.86□□□□□ -0.51
TPM1-217ENST00000559108 KCNE1P15382 129 aa11.86□□□□□ -0.51
TPM1-217ENST00000559108 BCAR1P56945 870 aa11.86□□□□□ -0.51
TPM1-217ENST00000559108 STX17P56962 302 aa11.86□□□□□ -0.51
TPM1-217ENST00000559108 CAMK1Q14012 370 aa11.86□□□□□ -0.51
TPM1-217ENST00000559108 KLHL40Q2TBA0 621 aa11.86□□□□□ -0.51
TPM1-217ENST00000559108 EPC2Q52LR7 807 aa11.86□□□□□ -0.51
TPM1-217ENST00000559108 CCDC183Q5T5S1 534 aa11.86□□□□□ -0.51
TPM1-217ENST00000559108 LMBRD2Q68DH5 695 aaPredicted RBP11.86□□□□□ -0.51
TPM1-217ENST00000559108 JADE1Q6IE81 842 aa11.86□□□□□ -0.51
TPM1-217ENST00000559108 SLFN12LQ6IEE8 588 aa11.86□□□□□ -0.51
TPM1-217ENST00000559108 KLHL10Q6JEL2 608 aa11.86□□□□□ -0.51
TPM1-217ENST00000559108 C11orf57Q6ZUT1 292 aaPredicted RBP11.86□□□□□ -0.51
TPM1-217ENST00000559108 GPD1LQ8N335 351 aa11.86□□□□□ -0.51
TPM1-217ENST00000559108 COLGALT1Q8NBJ5 622 aa11.86□□□□□ -0.51
TPM1-217ENST00000559108 RDH13Q8NBN7 331 aa11.86□□□□□ -0.51
TPM1-217ENST00000559108 CXorf38Q8TB03 319 aa11.86□□□□□ -0.51
TPM1-217ENST00000559108 NOC3LQ8WTT2 800 aaKnown RBP11.86□□□□□ -0.51
TPM1-217ENST00000559108 TMEM174Q8WUU8 243 aa11.86□□□□□ -0.51
TPM1-217ENST00000559108 P2RX5Q93086 422 aa11.86□□□□□ -0.51
TPM1-217ENST00000559108 CCDC34Q96HJ3 373 aa11.86□□□□□ -0.51
TPM1-217ENST00000559108 FUCA2Q9BTY2 467 aa11.86□□□□□ -0.51
TPM1-217ENST00000559108 ZNF576Q9H609 170 aa11.86□□□□□ -0.51
TPM1-217ENST00000559108 PDE11AQ9HCR9 933 aa11.86□□□□□ -0.51
TPM1-217ENST00000559108 HOOK1Q9UJC3 728 aaKnown RBP11.86□□□□□ -0.51
TPM1-217ENST00000559108 PCDHGC5Q9Y5F6 944 aa11.86□□□□□ -0.51
TPM1-217ENST00000559108 PLXNA3P51805 1871 aa11.85□□□□□ -0.51
TPM1-217ENST00000559108 MYO7AQ13402 2215 aa11.85□□□□□ -0.51
TPM1-217ENST00000559108 GRM6O15303 877 aa11.85□□□□□ -0.51
TPM1-217ENST00000559108 HOXA2O43364 376 aa11.85□□□□□ -0.51
TPM1-217ENST00000559108 ZC3H11AO75152 810 aaKnown RBP eCLIP11.85□□□□□ -0.51
TPM1-217ENST00000559108 EFEMP2O95967 443 aa11.85□□□□□ -0.51
TPM1-217ENST00000559108 GALTP07902 379 aa11.85□□□□□ -0.51
TPM1-217ENST00000559108 CCNE1P24864 410 aa11.85□□□□□ -0.51
TPM1-217ENST00000559108 BMPR1AP36894 532 aa11.85□□□□□ -0.51
TPM1-217ENST00000559108 NLRP12P59046 1061 aa11.85□□□□□ -0.51
TPM1-217ENST00000559108 DLG4P78352 724 aa11.85□□□□□ -0.51
TPM1-217ENST00000559108 GRIK3Q13003 919 aa11.85□□□□□ -0.51
TPM1-217ENST00000559108 ADGRE1Q14246 886 aa11.85□□□□□ -0.51
TPM1-217ENST00000559108 SNRNP35Q16560 246 aaKnown RBP11.85□□□□□ -0.51
TPM1-217ENST00000559108 KCNT2Q6UVM3 1135 aa11.85□□□□□ -0.51
TPM1-217ENST00000559108 SLC9A9Q8IVB4 645 aa11.85□□□□□ -0.51
TPM1-217ENST00000559108 ABI1Q8IZP0 508 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms