RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 LY9Q9HBG7 655 aa8.43□□□□□ -1.06
SPG11-213ENST00000558988 TMEM59LQ9UK28 342 aa8.43□□□□□ -1.06
SPG11-213ENST00000558988 DNAH12Q6ZR08 3092 aa8.43□□□□□ -1.06
SPG11-213ENST00000558988 SZT2Q5T011 3432 aa8.42□□□□□ -1.06
SPG11-213ENST00000558988 DDAH1O94760 285 aa8.42□□□□□ -1.06
SPG11-213ENST00000558988 CA3P07451 260 aa8.42□□□□□ -1.06
SPG11-213ENST00000558988 KCNJ6P48051 423 aa8.42□□□□□ -1.06
SPG11-213ENST00000558988 SP2Q02086 613 aa8.42□□□□□ -1.06
SPG11-213ENST00000558988 PTPN11Q06124 597 aaPredicted RBP8.42□□□□□ -1.06
SPG11-213ENST00000558988 TRAF1Q13077 416 aa8.42□□□□□ -1.06
SPG11-213ENST00000558988 HSDL1Q3SXM5 330 aa8.42□□□□□ -1.06
SPG11-213ENST00000558988 CELF3Q5SZQ8 465 aaKnown RBP8.42□□□□□ -1.06
SPG11-213ENST00000558988 UTP14CQ5TAP6 766 aaKnown RBP8.42□□□□□ -1.06
SPG11-213ENST00000558988 CREB3L3Q68CJ9 461 aa8.42□□□□□ -1.06
SPG11-213ENST00000558988 ALKBH2Q6NS38 261 aa8.42□□□□□ -1.06
SPG11-213ENST00000558988 USP17L6PQ6QN14 398 aa8.42□□□□□ -1.06
SPG11-213ENST00000558988 LRRC8DQ7L1W4 858 aa8.42□□□□□ -1.06
SPG11-213ENST00000558988 IRF2BP1Q8IU81 584 aa8.42□□□□□ -1.06
SPG11-213ENST00000558988 PPTC7Q8NI37 304 aa8.42□□□□□ -1.06
SPG11-213ENST00000558988 DHX38Q92620 1227 aaKnown RBP8.42□□□□□ -1.06
SPG11-213ENST00000558988 VWCEQ96DN2 955 aa8.42□□□□□ -1.06
SPG11-213ENST00000558988 KATNAL1Q9BW62 490 aa8.42□□□□□ -1.06
SPG11-213ENST00000558988 LSG1Q9H089 658 aaKnown RBP8.42□□□□□ -1.06
SPG11-213ENST00000558988 BCAS3Q9H6U6 928 aa8.42□□□□□ -1.06
SPG11-213ENST00000558988 MYRFQ9Y2G1 1151 aa8.42□□□□□ -1.06
SPG11-213ENST00000558988 ST14Q9Y5Y6 855 aa8.42□□□□□ -1.06
SPG11-213ENST00000558988 TANC1Q9C0D5 1861 aa8.42□□□□□ -1.06
SPG11-213ENST00000558988 DOCK5Q9H7D0 1870 aa8.41□□□□□ -1.06
SPG11-213ENST00000558988 TEX51A0A1B0GUA7 166 aa8.41□□□□□ -1.06
SPG11-213ENST00000558988 SH2B2O14492 632 aaPredicted RBP8.41□□□□□ -1.06
SPG11-213ENST00000558988 PFKMP08237 780 aa8.41□□□□□ -1.06
SPG11-213ENST00000558988 CTSHP09668 335 aa8.41□□□□□ -1.06
SPG11-213ENST00000558988 RFC2P35250 354 aa8.41□□□□□ -1.06
SPG11-213ENST00000558988 THPOP40225 353 aa8.41□□□□□ -1.06
SPG11-213ENST00000558988 FGD1P98174 961 aa8.41□□□□□ -1.06
SPG11-213ENST00000558988 UBE2SQ16763 222 aa8.41□□□□□ -1.06
SPG11-213ENST00000558988 HEATR3Q7Z4Q2 680 aa8.41□□□□□ -1.06
SPG11-213ENST00000558988 MFSD4AQ8N468 514 aa8.41□□□□□ -1.06
SPG11-213ENST00000558988 SRBD1Q8N5C6 995 aaKnown RBP8.41□□□□□ -1.06
SPG11-213ENST00000558988 ARNTL2Q8WYA1 636 aa8.41□□□□□ -1.06
SPG11-213ENST00000558988 UBE2FQ969M7 185 aa8.41□□□□□ -1.06
SPG11-213ENST00000558988 CTAGE1Q96RT6 745 aa8.41□□□□□ -1.06
SPG11-213ENST00000558988 MTUS1Q9ULD2 1270 aa8.41□□□□□ -1.06
SPG11-213ENST00000558988 PCDHA11Q9Y5I1 949 aa8.41□□□□□ -1.06
SPG11-213ENST00000558988 SLC12A7Q9Y666 1083 aa8.41□□□□□ -1.06
SPG11-213ENST00000558988 TET1Q8NFU7 2136 aa8.41□□□□□ -1.06
SPG11-213ENST00000558988 KIF28PB7ZC32 967 aa8.4□□□□□ -1.06
SPG11-213ENST00000558988 F2P00734 622 aa8.4□□□□□ -1.06
SPG11-213ENST00000558988 LGALS2P05162 132 aa8.4□□□□□ -1.06
SPG11-213ENST00000558988 SMIM10L2AP0DMW4 78 aa8.4□□□□□ -1.06
SPG11-213ENST00000558988 SMIM10L2BP0DMW5 78 aa8.4□□□□□ -1.06
SPG11-213ENST00000558988 CKBP12277 381 aa8.4□□□□□ -1.06
SPG11-213ENST00000558988 GNAQP50148 359 aa8.4□□□□□ -1.06
SPG11-213ENST00000558988 DEFB103AP81534 67 aa8.4□□□□□ -1.06
SPG11-213ENST00000558988 MRPS9P82933 396 aaKnown RBP8.4□□□□□ -1.06
SPG11-213ENST00000558988 GNPTABQ3T906 1256 aa8.4□□□□□ -1.06
SPG11-213ENST00000558988 ZNF618Q5T7W0 954 aa8.4□□□□□ -1.06
SPG11-213ENST00000558988 KCNV1Q6PIU1 500 aa8.4□□□□□ -1.06
SPG11-213ENST00000558988 SYNE3Q6ZMZ3 975 aa8.4□□□□□ -1.06
SPG11-213ENST00000558988 CENPQQ7L2Z9 268 aaPredicted RBP8.4□□□□□ -1.06
SPG11-213ENST00000558988 PDZD3Q86UT5 571 aa8.4□□□□□ -1.06
SPG11-213ENST00000558988 HERC6Q8IVU3 1022 aa8.4□□□□□ -1.06
SPG11-213ENST00000558988 CAGE1Q8TC20 777 aa8.4□□□□□ -1.06
SPG11-213ENST00000558988 AFAP1L1Q8TED9 768 aa8.4□□□□□ -1.06
SPG11-213ENST00000558988 ATP6V0A1Q93050 837 aa8.4□□□□□ -1.06
SPG11-213ENST00000558988 TMEM87BQ96K49 555 aa8.4□□□□□ -1.06
SPG11-213ENST00000558988 SLC9A7Q96T83 725 aa8.4□□□□□ -1.06
SPG11-213ENST00000558988 SPZ1Q9BXG8 430 aa8.4□□□□□ -1.06
SPG11-213ENST00000558988 MAF1Q9H063 256 aa8.4□□□□□ -1.06
SPG11-213ENST00000558988 ADAM7Q9H2U9 754 aa8.4□□□□□ -1.06
SPG11-213ENST00000558988 PSTPIP2Q9H939 334 aa8.4□□□□□ -1.06
SPG11-213ENST00000558988 MAP3K20Q9NYL2 800 aaKnown RBP8.4□□□□□ -1.06
SPG11-213ENST00000558988 TELO2Q9Y4R8 837 aa8.4□□□□□ -1.06
SPG11-213ENST00000558988 LAMA3Q16787 3333 aa8.4□□□□□ -1.07
SPG11-213ENST00000558988 C17orf102A2RUQ5 167 aa8.39□□□□□ -1.07
SPG11-213ENST00000558988 EPOPA6NHQ4 379 aa8.39□□□□□ -1.07
SPG11-213ENST00000558988 H3BRB1 525 aa8.39□□□□□ -1.07
SPG11-213ENST00000558988 HAS3O00219 553 aa8.39□□□□□ -1.07
SPG11-213ENST00000558988 FIBPO43427 364 aa8.39□□□□□ -1.07
SPG11-213ENST00000558988 NBNO60934 754 aa8.39□□□□□ -1.07
SPG11-213ENST00000558988 PPFIA4O75335 1185 aa8.39□□□□□ -1.07
SPG11-213ENST00000558988 CALM1P0DP23 149 aa8.39□□□□□ -1.07
SPG11-213ENST00000558988 CALM2P0DP24 149 aa8.39□□□□□ -1.07
SPG11-213ENST00000558988 CALM3P0DP25 149 aa8.39□□□□□ -1.07
SPG11-213ENST00000558988 CPA1P15085 419 aa8.39□□□□□ -1.07
SPG11-213ENST00000558988 MARK3P27448 753 aa8.39□□□□□ -1.07
SPG11-213ENST00000558988 NTF4P34130 210 aa8.39□□□□□ -1.07
SPG11-213ENST00000558988 WDR5P61964 334 aaKnown RBP8.39□□□□□ -1.07
SPG11-213ENST00000558988 GHRHRQ02643 423 aa8.39□□□□□ -1.07
SPG11-213ENST00000558988 PLP2Q04941 152 aa8.39□□□□□ -1.07
SPG11-213ENST00000558988 TCTN1Q2MV58 587 aa8.39□□□□□ -1.07
SPG11-213ENST00000558988 RPS26P11Q5JNZ5 115 aaPredicted RBP8.39□□□□□ -1.07
SPG11-213ENST00000558988 KRT40Q6A162 431 aa8.39□□□□□ -1.07
SPG11-213ENST00000558988 NLRX1Q86UT6 975 aa8.39□□□□□ -1.07
SPG11-213ENST00000558988 SESTD1Q86VW0 696 aa8.39□□□□□ -1.07
SPG11-213ENST00000558988 TMTC2Q8N394 836 aa8.39□□□□□ -1.07
SPG11-213ENST00000558988 SAMD3Q8N6K7 520 aa8.39□□□□□ -1.07
SPG11-213ENST00000558988 FANCBQ8NB91 859 aa8.39□□□□□ -1.07
SPG11-213ENST00000558988 PGBD1Q96JS3 809 aa8.39□□□□□ -1.07
SPG11-213ENST00000558988 LZTS2Q9BRK4 669 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms