RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 PAPLNO95428 1278 aa12.31□□□□□ -0.44
BMP4-204ENST00000558961 CACNB1Q02641 598 aaPredicted RBP12.31□□□□□ -0.44
BMP4-204ENST00000558961 ITIH3Q06033 890 aa12.31□□□□□ -0.44
BMP4-204ENST00000558961 MCL1Q07820 350 aa12.31□□□□□ -0.44
BMP4-204ENST00000558961 STRN3Q13033 797 aa12.31□□□□□ -0.44
BMP4-204ENST00000558961 NOLC1Q14978 699 aaKnown RBP eCLIP12.31□□□□□ -0.44
BMP4-204ENST00000558961 SPECC1Q5M775 1068 aa12.31□□□□□ -0.44
BMP4-204ENST00000558961 LLGL2Q6P1M3 1020 aa12.31□□□□□ -0.44
BMP4-204ENST00000558961 TAS1R1Q7RTX1 841 aa12.31□□□□□ -0.44
BMP4-204ENST00000558961 HAUS6Q7Z4H7 955 aa12.31□□□□□ -0.44
BMP4-204ENST00000558961 KRI1Q8N9T8 703 aaKnown RBP12.31□□□□□ -0.44
BMP4-204ENST00000558961 CHAMP1Q96JM3 812 aa12.31□□□□□ -0.44
BMP4-204ENST00000558961 CLIC6Q96NY7 704 aa12.31□□□□□ -0.44
BMP4-204ENST00000558961 CCDC94Q9BW85 323 aaPredicted RBP12.31□□□□□ -0.44
BMP4-204ENST00000558961 PHF7Q9BWX1 381 aaPredicted RBP12.31□□□□□ -0.44
BMP4-204ENST00000558961 EMILIN2Q9BXX0 1053 aa12.31□□□□□ -0.44
BMP4-204ENST00000558961 GPR62Q9BZJ7 368 aa12.31□□□□□ -0.44
BMP4-204ENST00000558961 ST6GALNAC4Q9H4F1 302 aa12.31□□□□□ -0.44
BMP4-204ENST00000558961 PARVGQ9HBI0 331 aa12.31□□□□□ -0.44
BMP4-204ENST00000558961 LMBRD1Q9NUN5 540 aa12.31□□□□□ -0.44
BMP4-204ENST00000558961 CNTN3Q9P232 1028 aa12.31□□□□□ -0.44
BMP4-204ENST00000558961 CACNG4Q9UBN1 327 aa12.31□□□□□ -0.44
BMP4-204ENST00000558961 CCDC39Q9UFE4 941 aa12.31□□□□□ -0.44
BMP4-204ENST00000558961 GDAQ9Y2T3 454 aa12.31□□□□□ -0.44
BMP4-204ENST00000558961 ATP6V1DQ9Y5K8 247 aa12.31□□□□□ -0.44
BMP4-204ENST00000558961 MEFVO15553 781 aaPredicted RBP12.3□□□□□ -0.44
BMP4-204ENST00000558961 TRAK2O60296 914 aa12.3□□□□□ -0.44
BMP4-204ENST00000558961 PPP6R2O75170 966 aa12.3□□□□□ -0.44
BMP4-204ENST00000558961 YEATS4O95619 227 aa12.3□□□□□ -0.44
BMP4-204ENST00000558961 KCNE1P15382 129 aa12.3□□□□□ -0.44
BMP4-204ENST00000558961 EPCAMP16422 314 aa12.3□□□□□ -0.44
BMP4-204ENST00000558961 SSTR3P32745 418 aaPredicted RBP12.3□□□□□ -0.44
BMP4-204ENST00000558961 ABCD1P33897 745 aa12.3□□□□□ -0.44
BMP4-204ENST00000558961 TXLNAP40222 546 aa12.3□□□□□ -0.44
BMP4-204ENST00000558961 CEBPZQ03701 1054 aaKnown RBP12.3□□□□□ -0.44
BMP4-204ENST00000558961 USP41Q3LFD5 358 aa12.3□□□□□ -0.44
BMP4-204ENST00000558961 RASSF8Q8NHQ8 419 aa12.3□□□□□ -0.44
BMP4-204ENST00000558961 UROC1Q96N76 676 aa12.3□□□□□ -0.44
BMP4-204ENST00000558961 C1QTNF1Q9BXJ1 281 aa12.3□□□□□ -0.44
BMP4-204ENST00000558961 ADAM7Q9H2U9 754 aa12.3□□□□□ -0.44
BMP4-204ENST00000558961 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.3□□□□□ -0.44
BMP4-204ENST00000558961 FNIP2Q9P278 1114 aa12.3□□□□□ -0.44
BMP4-204ENST00000558961 A0A087X0B3 334 aa12.29□□□□□ -0.44
BMP4-204ENST00000558961 SMIM28A0A1B0GU29 152 aa12.29□□□□□ -0.44
BMP4-204ENST00000558961 CASTOR2A6NHX0 329 aa12.29□□□□□ -0.44
BMP4-204ENST00000558961 TEX28O15482 410 aa12.29□□□□□ -0.44
BMP4-204ENST00000558961 FAM189A1O60320 539 aa12.29□□□□□ -0.44
BMP4-204ENST00000558961 FAM13AO94988 1023 aa12.29□□□□□ -0.44
BMP4-204ENST00000558961 ADH1AP07327 375 aa12.29□□□□□ -0.44
BMP4-204ENST00000558961 PTMSP20962 102 aa12.29□□□□□ -0.44
BMP4-204ENST00000558961 CA8P35219 290 aa12.29□□□□□ -0.44
BMP4-204ENST00000558961 YARSP54577 528 aaKnown RBP12.29□□□□□ -0.44
BMP4-204ENST00000558961 GTF2BQ00403 316 aa12.29□□□□□ -0.44
BMP4-204ENST00000558961 CREMQ03060 361 aa12.29□□□□□ -0.44
BMP4-204ENST00000558961 ELAVL2Q12926 359 aaKnown RBP12.29□□□□□ -0.44
BMP4-204ENST00000558961 UPP1Q16831 310 aa12.29□□□□□ -0.44
BMP4-204ENST00000558961 GLRA4Q5JXX5 417 aa12.29□□□□□ -0.44
BMP4-204ENST00000558961 FOXD4L5Q5VV16 416 aaPredicted RBP12.29□□□□□ -0.44
BMP4-204ENST00000558961 ATL3Q6DD88 541 aa12.29□□□□□ -0.44
BMP4-204ENST00000558961 KIAA1841Q6NSI8 718 aa12.29□□□□□ -0.44
BMP4-204ENST00000558961 MAP4K3Q8IVH8 894 aa12.29□□□□□ -0.44
BMP4-204ENST00000558961 FOXD4L4Q8WXT5 416 aaPredicted RBP12.29□□□□□ -0.44
BMP4-204ENST00000558961 PIK3R5Q8WYR1 880 aa12.29□□□□□ -0.44
BMP4-204ENST00000558961 DNAJC19Q96DA6 116 aa12.29□□□□□ -0.44
BMP4-204ENST00000558961 ZBTB45Q96K62 511 aaPredicted RBP12.29□□□□□ -0.44
BMP4-204ENST00000558961 FBXL18Q96ME1 805 aa12.29□□□□□ -0.44
BMP4-204ENST00000558961 ZNF396Q96N95 335 aaPredicted RBP12.29□□□□□ -0.44
BMP4-204ENST00000558961 ZMAT2Q96NC0 199 aaKnown RBP12.29□□□□□ -0.44
BMP4-204ENST00000558961 NECTIN4Q96NY8 510 aa12.29□□□□□ -0.44
BMP4-204ENST00000558961 RHOBTB2Q9BYZ6 727 aa12.29□□□□□ -0.44
BMP4-204ENST00000558961 HAPLN2Q9GZV7 340 aa12.29□□□□□ -0.44
BMP4-204ENST00000558961 EPHX3Q9H6B9 360 aa12.29□□□□□ -0.44
BMP4-204ENST00000558961 SFXN1Q9H9B4 322 aa12.29□□□□□ -0.44
BMP4-204ENST00000558961 C11orf16Q9NQ32 467 aa12.29□□□□□ -0.44
BMP4-204ENST00000558961 SLC38A7Q9NVC3 462 aa12.29□□□□□ -0.44
BMP4-204ENST00000558961 ANKFY1Q9P2R3 1169 aa12.29□□□□□ -0.44
BMP4-204ENST00000558961 SEL1LQ9UBV2 794 aa12.29□□□□□ -0.44
BMP4-204ENST00000558961 TBX20Q9UMR3 447 aa12.29□□□□□ -0.44
BMP4-204ENST00000558961 K7ENM7 598 aa12.28□□□□□ -0.44
BMP4-204ENST00000558961 C2CD2LO14523 706 aa12.28□□□□□ -0.44
BMP4-204ENST00000558961 SPTLC2O15270 562 aa12.28□□□□□ -0.44
BMP4-204ENST00000558961 CLDN3O15551 220 aa12.28□□□□□ -0.44
BMP4-204ENST00000558961 TBCAO75347 108 aaKnown RBP12.28□□□□□ -0.44
BMP4-204ENST00000558961 TADA2AO75478 443 aa12.28□□□□□ -0.44
BMP4-204ENST00000558961 PPP1R37O75864 691 aa12.28□□□□□ -0.44
BMP4-204ENST00000558961 ADRB2P07550 413 aa12.28□□□□□ -0.44
BMP4-204ENST00000558961 ALADP13716 330 aa12.28□□□□□ -0.44
BMP4-204ENST00000558961 KLRC2P26717 231 aa12.28□□□□□ -0.44
BMP4-204ENST00000558961 SOX4Q06945 474 aaPredicted RBP12.28□□□□□ -0.44
BMP4-204ENST00000558961 DHX8Q14562 1220 aaKnown RBP12.28□□□□□ -0.44
BMP4-204ENST00000558961 SLC10A6Q3KNW5 377 aa12.28□□□□□ -0.44
BMP4-204ENST00000558961 HERC4Q5GLZ8 1057 aaPredicted RBP12.28□□□□□ -0.44
BMP4-204ENST00000558961 RTP2Q5QGT7 225 aa12.28□□□□□ -0.44
BMP4-204ENST00000558961 RRAGBQ5VZM2 374 aa12.28□□□□□ -0.44
BMP4-204ENST00000558961 CES5AQ6NT32 575 aa12.28□□□□□ -0.44
BMP4-204ENST00000558961 CD300LGQ6UXG3 332 aa12.28□□□□□ -0.44
BMP4-204ENST00000558961 C15orf39Q6ZRI6 1047 aa12.28□□□□□ -0.44
BMP4-204ENST00000558961 CCDC73Q6ZRK6 1079 aa12.28□□□□□ -0.44
BMP4-204ENST00000558961 ZBTB33Q86T24 672 aa12.28□□□□□ -0.44
BMP4-204ENST00000558961 MYCT1Q8N699 235 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms