RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 ARF4P18085 180 aaPredicted RBP17.7■□□□□ 0.42
CDC42BPB-203ENST00000558867 RPL17P18621 184 aaKnown RBP17.7■□□□□ 0.42
CDC42BPB-203ENST00000558867 CYP4A11Q02928 519 aa17.7■□□□□ 0.42
CDC42BPB-203ENST00000558867 MBTD1Q05BQ5 628 aa17.7■□□□□ 0.42
CDC42BPB-203ENST00000558867 TUSC3Q13454 348 aa17.7■□□□□ 0.42
CDC42BPB-203ENST00000558867 CTTNQ14247 550 aaKnown RBP17.7■□□□□ 0.42
CDC42BPB-203ENST00000558867 PSMD5Q16401 504 aa17.7■□□□□ 0.42
CDC42BPB-203ENST00000558867 SKOR2Q2VWA4 1001 aaPredicted RBP17.7■□□□□ 0.42
CDC42BPB-203ENST00000558867 UVSSAQ2YD98 709 aa17.7■□□□□ 0.42
CDC42BPB-203ENST00000558867 VARS2Q5ST30 1063 aaKnown RBP17.7■□□□□ 0.42
CDC42BPB-203ENST00000558867 PARM1Q6UWI2 310 aa17.7■□□□□ 0.42
CDC42BPB-203ENST00000558867 RTL10Q7L3V2 364 aa17.7■□□□□ 0.42
CDC42BPB-203ENST00000558867 CEP57Q86XR8 500 aa17.7■□□□□ 0.42
CDC42BPB-203ENST00000558867 NSUN7Q8NE18 718 aaKnown RBP17.7■□□□□ 0.42
CDC42BPB-203ENST00000558867 FGF14Q92915 247 aa17.7■□□□□ 0.42
CDC42BPB-203ENST00000558867 FBXW11Q9UKB1 542 aa17.7■□□□□ 0.42
CDC42BPB-203ENST00000558867 FAM170BA6NMN3 283 aa17.69■□□□□ 0.42
CDC42BPB-203ENST00000558867 C8AP07357 584 aa17.69■□□□□ 0.42
CDC42BPB-203ENST00000558867 RSPO4Q2I0M5 234 aaPredicted RBP17.69■□□□□ 0.42
CDC42BPB-203ENST00000558867 ZBTB41Q5SVQ8 909 aa17.69■□□□□ 0.42
CDC42BPB-203ENST00000558867 FAM171A1Q5VUB5 890 aa17.69■□□□□ 0.42
CDC42BPB-203ENST00000558867 DCLK2Q8N568 766 aa17.69■□□□□ 0.42
CDC42BPB-203ENST00000558867 PIK3R5Q8WYR1 880 aa17.69■□□□□ 0.42
CDC42BPB-203ENST00000558867 HAS1Q92839 578 aa17.69■□□□□ 0.42
CDC42BPB-203ENST00000558867 FGF13Q92913 245 aa17.69■□□□□ 0.42
CDC42BPB-203ENST00000558867 PRIMPOLQ96LW4 560 aa17.69■□□□□ 0.42
CDC42BPB-203ENST00000558867 PHF20Q9BVI0 1012 aa17.69■□□□□ 0.42
CDC42BPB-203ENST00000558867 PRMT7Q9NVM4 692 aaPredicted RBP17.69■□□□□ 0.42
CDC42BPB-203ENST00000558867 KLK14Q9P0G3 267 aa17.69■□□□□ 0.42
CDC42BPB-203ENST00000558867 KCNJ14Q9UNX9 436 aa17.69■□□□□ 0.42
CDC42BPB-203ENST00000558867 MTMR6Q9Y217 621 aa17.69■□□□□ 0.42
CDC42BPB-203ENST00000558867 MRPS17Q9Y2R5 130 aaKnown RBP17.69■□□□□ 0.42
CDC42BPB-203ENST00000558867 CEP250Q9BV73 2442 aa17.69■□□□□ 0.42
CDC42BPB-203ENST00000558867 A0A1B0GUA9 196 aa17.68■□□□□ 0.42
CDC42BPB-203ENST00000558867 PRR5-ARHGAP8B1AHC4 643 aa17.68■□□□□ 0.42
CDC42BPB-203ENST00000558867 CTDNEP1O95476 244 aa17.68■□□□□ 0.42
CDC42BPB-203ENST00000558867 F13A1P00488 732 aa17.68■□□□□ 0.42
CDC42BPB-203ENST00000558867 THP07101 528 aa17.68■□□□□ 0.42
CDC42BPB-203ENST00000558867 POU2F2P09086 479 aa17.68■□□□□ 0.42
CDC42BPB-203ENST00000558867 ARHGAP8P85298 464 aa17.68■□□□□ 0.42
CDC42BPB-203ENST00000558867 CSTF1Q05048 431 aaKnown RBP17.68■□□□□ 0.42
CDC42BPB-203ENST00000558867 STK3Q13188 491 aa17.68■□□□□ 0.42
CDC42BPB-203ENST00000558867 CAPSQ13938 189 aa17.68■□□□□ 0.42
CDC42BPB-203ENST00000558867 NPY5RQ15761 445 aa17.68■□□□□ 0.42
CDC42BPB-203ENST00000558867 TMEM132AQ24JP5 1023 aa17.68■□□□□ 0.42
CDC42BPB-203ENST00000558867 RTP2Q5QGT7 225 aa17.68■□□□□ 0.42
CDC42BPB-203ENST00000558867 LARP1BQ659C4 914 aaKnown RBP17.68■□□□□ 0.42
CDC42BPB-203ENST00000558867 PRSS55Q6UWB4 352 aaPredicted RBP17.68■□□□□ 0.42
CDC42BPB-203ENST00000558867 PIK3AP1Q6ZUJ8 805 aa17.68■□□□□ 0.42
CDC42BPB-203ENST00000558867 ZBTB8OSQ8IWT0 167 aa17.68■□□□□ 0.42
CDC42BPB-203ENST00000558867 FANCMQ8IYD8 2048 aa17.68■□□□□ 0.42
CDC42BPB-203ENST00000558867 SUMF1Q8NBK3 374 aa17.68■□□□□ 0.42
CDC42BPB-203ENST00000558867 GSTCDQ8NEC7 633 aa17.68■□□□□ 0.42
CDC42BPB-203ENST00000558867 DDX23Q9BUQ8 820 aaKnown RBP17.68■□□□□ 0.42
CDC42BPB-203ENST00000558867 BRMS1Q9HCU9 246 aa17.68■□□□□ 0.42
CDC42BPB-203ENST00000558867 XPNPEP1Q9NQW7 623 aa17.68■□□□□ 0.42
CDC42BPB-203ENST00000558867 KCNH3Q9ULD8 1083 aa17.68■□□□□ 0.42
CDC42BPB-203ENST00000558867 PCDHA12Q9UN75 941 aa17.68■□□□□ 0.42
CDC42BPB-203ENST00000558867 CACNA1IQ9P0X4 2223 aa17.68■□□□□ 0.42
CDC42BPB-203ENST00000558867 MIA3Q5JRA6 1907 aa17.67■□□□□ 0.42
CDC42BPB-203ENST00000558867 POTEMA6NI47 508 aa17.67■□□□□ 0.42
CDC42BPB-203ENST00000558867 SLITRK3O94933 977 aa17.67■□□□□ 0.42
CDC42BPB-203ENST00000558867 LYPLA2O95372 231 aa17.67■□□□□ 0.42
CDC42BPB-203ENST00000558867 GLULP15104 373 aa17.67■□□□□ 0.42
CDC42BPB-203ENST00000558867 ARL2P36404 184 aa17.67■□□□□ 0.42
CDC42BPB-203ENST00000558867 AMHR2Q16671 573 aa17.67■□□□□ 0.42
CDC42BPB-203ENST00000558867 POTEGQ6S5H5 508 aa17.67■□□□□ 0.42
CDC42BPB-203ENST00000558867 LNX1Q8TBB1 728 aaPredicted RBP17.67■□□□□ 0.42
CDC42BPB-203ENST00000558867 ASAP3Q8TDY4 903 aa17.67■□□□□ 0.42
CDC42BPB-203ENST00000558867 EIF2AK1Q9BQI3 630 aaKnown RBP17.67■□□□□ 0.42
CDC42BPB-203ENST00000558867 CLSTN3Q9BQT9 956 aa17.67■□□□□ 0.42
CDC42BPB-203ENST00000558867 ADPGKQ9BRR6 497 aa17.67■□□□□ 0.42
CDC42BPB-203ENST00000558867 RPP25Q9BUL9 199 aaKnown RBP17.67■□□□□ 0.42
CDC42BPB-203ENST00000558867 ZSCAN32Q9NX65 697 aa17.67■□□□□ 0.42
CDC42BPB-203ENST00000558867 LRRIQ4A6NIV6 560 aa17.66■□□□□ 0.42
CDC42BPB-203ENST00000558867 N4BP3O15049 544 aa17.66■□□□□ 0.42
CDC42BPB-203ENST00000558867 ZBTB39O15060 712 aa17.66■□□□□ 0.42
CDC42BPB-203ENST00000558867 CCL16O15467 120 aa17.66■□□□□ 0.42
CDC42BPB-203ENST00000558867 GLRA2P23416 452 aa17.66■□□□□ 0.42
CDC42BPB-203ENST00000558867 LMNB2Q03252 620 aa17.66■□□□□ 0.42
CDC42BPB-203ENST00000558867 PPP2R5DQ14738 602 aa17.66■□□□□ 0.42
CDC42BPB-203ENST00000558867 PABPC1LQ4VXU2 614 aaKnown RBP17.66■□□□□ 0.42
CDC42BPB-203ENST00000558867 AXDND1Q5T1B0 1012 aaPredicted RBP17.66■□□□□ 0.42
CDC42BPB-203ENST00000558867 ZNF852Q6ZMS4 543 aa17.66■□□□□ 0.42
CDC42BPB-203ENST00000558867 POTEDQ86YR6 584 aa17.66■□□□□ 0.42
CDC42BPB-203ENST00000558867 MAML2Q8IZL2 1156 aaPredicted RBP17.66■□□□□ 0.42
CDC42BPB-203ENST00000558867 ST13P5Q8NFI4 369 aaPredicted RBP17.66■□□□□ 0.42
CDC42BPB-203ENST00000558867 SLC7A14Q8TBB6 771 aa17.66■□□□□ 0.42
CDC42BPB-203ENST00000558867 WASF1Q92558 559 aa17.66■□□□□ 0.42
CDC42BPB-203ENST00000558867 RABGGTAQ92696 567 aa17.66■□□□□ 0.42
CDC42BPB-203ENST00000558867 AIFM3Q96NN9 605 aa17.66■□□□□ 0.42
CDC42BPB-203ENST00000558867 FAM126AQ9BYI3 521 aaPredicted RBP17.66■□□□□ 0.42
CDC42BPB-203ENST00000558867 POLR3FQ9H1D9 316 aaPredicted RBP17.66■□□□□ 0.42
CDC42BPB-203ENST00000558867 LTB4R2Q9NPC1 389 aa17.66■□□□□ 0.42
CDC42BPB-203ENST00000558867 NCOR2Q9Y618 2525 aa17.66■□□□□ 0.42
CDC42BPB-203ENST00000558867 MYH15Q9Y2K3 1946 aa17.65■□□□□ 0.42
CDC42BPB-203ENST00000558867 CASTOR2A6NHX0 329 aa17.65■□□□□ 0.42
CDC42BPB-203ENST00000558867 B4GALT5O43286 388 aa17.65■□□□□ 0.42
CDC42BPB-203ENST00000558867 TRAPPC3O43617 180 aa17.65■□□□□ 0.42
CDC42BPB-203ENST00000558867 TBC1D4O60343 1298 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms