RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 ALKAL1Q6UXT8 129 aa16.99■□□□□ 0.31
CSHL1-208ENST00000558609 ZPBP2Q6X784 338 aa16.99■□□□□ 0.31
CSHL1-208ENST00000558609 GPBP1Q86WP2 473 aa16.99■□□□□ 0.31
CSHL1-208ENST00000558609 CEP120Q8N960 986 aa16.99■□□□□ 0.31
CSHL1-208ENST00000558609 TCHPQ9BT92 498 aa16.99■□□□□ 0.31
CSHL1-208ENST00000558609 ZSCAN16Q9H4T2 348 aaPredicted RBP16.99■□□□□ 0.31
CSHL1-208ENST00000558609 POMKQ9H5K3 350 aa16.99■□□□□ 0.31
CSHL1-208ENST00000558609 SFXN1Q9H9B4 322 aa16.99■□□□□ 0.31
CSHL1-208ENST00000558609 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.99■□□□□ 0.31
CSHL1-208ENST00000558609 TOPORSQ9NS56 1045 aaPredicted RBP16.99■□□□□ 0.31
CSHL1-208ENST00000558609 FNIP2Q9P278 1114 aa16.99■□□□□ 0.31
CSHL1-208ENST00000558609 CDH22Q9UJ99 828 aa16.99■□□□□ 0.31
CSHL1-208ENST00000558609 FBXO2Q9UK22 296 aaPredicted RBP16.99■□□□□ 0.31
CSHL1-208ENST00000558609 SRPRBQ9Y5M8 271 aaKnown RBP16.99■□□□□ 0.31
CSHL1-208ENST00000558609 MORC2Q9Y6X9 1032 aaPredicted RBP16.99■□□□□ 0.31
CSHL1-208ENST00000558609 SMIM28A0A1B0GU29 152 aa16.98■□□□□ 0.31
CSHL1-208ENST00000558609 STX6O43752 255 aa16.98■□□□□ 0.31
CSHL1-208ENST00000558609 TOM1L1O75674 476 aa16.98■□□□□ 0.31
CSHL1-208ENST00000558609 KIF4AO95239 1232 aa16.98■□□□□ 0.31
CSHL1-208ENST00000558609 SCP2P22307 547 aa16.98■□□□□ 0.31
CSHL1-208ENST00000558609 MARCKSP29966 332 aaPredicted RBP16.98■□□□□ 0.31
CSHL1-208ENST00000558609 DDIT3P35638 169 aa16.98■□□□□ 0.31
CSHL1-208ENST00000558609 ZNF131P52739 623 aa16.98■□□□□ 0.31
CSHL1-208ENST00000558609 CACNB1Q02641 598 aaPredicted RBP16.98■□□□□ 0.31
CSHL1-208ENST00000558609 CREMQ03060 361 aa16.98■□□□□ 0.31
CSHL1-208ENST00000558609 DHX8Q14562 1220 aaKnown RBP16.98■□□□□ 0.31
CSHL1-208ENST00000558609 MCM6Q14566 821 aa16.98■□□□□ 0.31
CSHL1-208ENST00000558609 FAM173BQ6P4H8 233 aa16.98■□□□□ 0.31
CSHL1-208ENST00000558609 ZBTB33Q86T24 672 aa16.98■□□□□ 0.31
CSHL1-208ENST00000558609 RASSF8Q8NHQ8 419 aa16.98■□□□□ 0.31
CSHL1-208ENST00000558609 EPSTI1Q96J88 318 aa16.98■□□□□ 0.31
CSHL1-208ENST00000558609 ZBTB45Q96K62 511 aaPredicted RBP16.98■□□□□ 0.31
CSHL1-208ENST00000558609 B3GALT6Q96L58 329 aa16.98■□□□□ 0.31
CSHL1-208ENST00000558609 ACAP3Q96P50 834 aa16.98■□□□□ 0.31
CSHL1-208ENST00000558609 REEP2Q9BRK0 252 aa16.98■□□□□ 0.31
CSHL1-208ENST00000558609 FOXD4L1Q9NU39 408 aa16.98■□□□□ 0.31
CSHL1-208ENST00000558609 DPP7Q9UHL4 492 aa16.98■□□□□ 0.31
CSHL1-208ENST00000558609 NR2E1Q9Y466 385 aa16.98■□□□□ 0.31
CSHL1-208ENST00000558609 TRIP11Q15643 1979 aa16.97■□□□□ 0.31
CSHL1-208ENST00000558609 TMEM189-UBE2V1I3L0A0 370 aa16.97■□□□□ 0.31
CSHL1-208ENST00000558609 GLUD1P00367 558 aa16.97■□□□□ 0.31
CSHL1-208ENST00000558609 WEE2P0C1S8 567 aa16.97■□□□□ 0.31
CSHL1-208ENST00000558609 OSTNP61366 133 aa16.97■□□□□ 0.31
CSHL1-208ENST00000558609 ELAVL2Q12926 359 aaKnown RBP16.97■□□□□ 0.31
CSHL1-208ENST00000558609 GLRA4Q5JXX5 417 aa16.97■□□□□ 0.31
CSHL1-208ENST00000558609 DCLRE1AQ6PJP8 1040 aa16.97■□□□□ 0.31
CSHL1-208ENST00000558609 TMC5Q6UXY8 1006 aa16.97■□□□□ 0.31
CSHL1-208ENST00000558609 HFE2Q6ZVN8 426 aa16.97■□□□□ 0.31
CSHL1-208ENST00000558609 USP49Q70CQ1 688 aa16.97■□□□□ 0.31
CSHL1-208ENST00000558609 HAUS6Q7Z4H7 955 aa16.97■□□□□ 0.31
CSHL1-208ENST00000558609 GPR149Q86SP6 731 aa16.97■□□□□ 0.31
CSHL1-208ENST00000558609 CMASQ8NFW8 434 aaPredicted RBP16.97■□□□□ 0.31
CSHL1-208ENST00000558609 HASPINQ8TF76 798 aa16.97■□□□□ 0.31
CSHL1-208ENST00000558609 HDAC7Q8WUI4 952 aa16.97■□□□□ 0.31
CSHL1-208ENST00000558609 RIN2Q8WYP3 895 aaPredicted RBP16.97■□□□□ 0.31
CSHL1-208ENST00000558609 LARP4BQ92615 738 aaKnown RBP16.97■□□□□ 0.31
CSHL1-208ENST00000558609 EDAQ92838 391 aa16.97■□□□□ 0.31
CSHL1-208ENST00000558609 UROC1Q96N76 676 aa16.97■□□□□ 0.31
CSHL1-208ENST00000558609 TTPALQ9BTX7 342 aa16.97■□□□□ 0.31
CSHL1-208ENST00000558609 PARVGQ9HBI0 331 aa16.97■□□□□ 0.31
CSHL1-208ENST00000558609 TRIOO75962 3097 aa16.97■□□□□ 0.31
CSHL1-208ENST00000558609 KCNE1P15382 129 aa16.96■□□□□ 0.31
CSHL1-208ENST00000558609 MCL1Q07820 350 aa16.96■□□□□ 0.31
CSHL1-208ENST00000558609 SLC39A14Q15043 492 aa16.96■□□□□ 0.31
CSHL1-208ENST00000558609 UPP1Q16831 310 aa16.96■□□□□ 0.31
CSHL1-208ENST00000558609 SPECC1Q5M775 1068 aa16.96■□□□□ 0.31
CSHL1-208ENST00000558609 RTP2Q5QGT7 225 aa16.96■□□□□ 0.31
CSHL1-208ENST00000558609 FAM171A1Q5VUB5 890 aa16.96■□□□□ 0.31
CSHL1-208ENST00000558609 LILRA6Q6PI73 481 aa16.96■□□□□ 0.31
CSHL1-208ENST00000558609 ELMSAN1Q6PJG2 1045 aa16.96■□□□□ 0.31
CSHL1-208ENST00000558609 C15orf39Q6ZRI6 1047 aa16.96■□□□□ 0.31
CSHL1-208ENST00000558609 MYCT1Q8N699 235 aa16.96■□□□□ 0.31
CSHL1-208ENST00000558609 PIK3R5Q8WYR1 880 aa16.96■□□□□ 0.31
CSHL1-208ENST00000558609 SNX27Q96L92 541 aa16.96■□□□□ 0.31
CSHL1-208ENST00000558609 USP28Q96RU2 1077 aa16.96■□□□□ 0.31
CSHL1-208ENST00000558609 RHOBTB2Q9BYZ6 727 aa16.96■□□□□ 0.31
CSHL1-208ENST00000558609 MAN1C1Q9NR34 630 aa16.96■□□□□ 0.31
CSHL1-208ENST00000558609 SLC38A7Q9NVC3 462 aa16.96■□□□□ 0.31
CSHL1-208ENST00000558609 CCDC39Q9UFE4 941 aa16.96■□□□□ 0.31
CSHL1-208ENST00000558609 SPDYE4A6NLX3 237 aa16.95■□□□□ 0.3
CSHL1-208ENST00000558609 CLDN3O15551 220 aa16.95■□□□□ 0.3
CSHL1-208ENST00000558609 B3GAT3O94766 335 aa16.95■□□□□ 0.3
CSHL1-208ENST00000558609 FAM13AO94988 1023 aa16.95■□□□□ 0.3
CSHL1-208ENST00000558609 PAPLNO95428 1278 aa16.95■□□□□ 0.3
CSHL1-208ENST00000558609 CLCNKBP51801 687 aa16.95■□□□□ 0.3
CSHL1-208ENST00000558609 CEBPZQ03701 1054 aaKnown RBP16.95■□□□□ 0.3
CSHL1-208ENST00000558609 NOLC1Q14978 699 aaKnown RBP eCLIP16.95■□□□□ 0.3
CSHL1-208ENST00000558609 PDXDC1Q6P996 788 aa16.95■□□□□ 0.3
CSHL1-208ENST00000558609 CD300LGQ6UXG3 332 aa16.95■□□□□ 0.3
CSHL1-208ENST00000558609 CYP26C1Q6V0L0 522 aa16.95■□□□□ 0.3
CSHL1-208ENST00000558609 LNX1Q8TBB1 728 aaPredicted RBP16.95■□□□□ 0.3
CSHL1-208ENST00000558609 FEZF2Q8TBJ5 459 aa16.95■□□□□ 0.3
CSHL1-208ENST00000558609 DDX27Q96GQ7 796 aaKnown RBP16.95■□□□□ 0.3
CSHL1-208ENST00000558609 ZMAT2Q96NC0 199 aaKnown RBP16.95■□□□□ 0.3
CSHL1-208ENST00000558609 CLIC6Q96NY7 704 aa16.95■□□□□ 0.3
CSHL1-208ENST00000558609 PLEKHA4Q9H4M7 779 aa16.95■□□□□ 0.3
CSHL1-208ENST00000558609 TSHZ2Q9NRE2 1034 aa16.95■□□□□ 0.3
CSHL1-208ENST00000558609 CNTN3Q9P232 1028 aa16.95■□□□□ 0.3
CSHL1-208ENST00000558609 ANKFY1Q9P2R3 1169 aa16.95■□□□□ 0.3
CSHL1-208ENST00000558609 STK17AQ9UEE5 414 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms