RNA–Protein interactions for RNA: ENST00000558321.5

CDC42BPB-202, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-202ENST00000558321 CREMQ03060 361 aa13.56□□□□□ -0.24
CDC42BPB-202ENST00000558321 CEBPZQ03701 1054 aaKnown RBP13.56□□□□□ -0.24
CDC42BPB-202ENST00000558321 GRIN1Q05586 938 aa13.56□□□□□ -0.24
CDC42BPB-202ENST00000558321 ELAVL2Q12926 359 aaKnown RBP13.56□□□□□ -0.24
CDC42BPB-202ENST00000558321 KARSQ15046 597 aaKnown RBP13.56□□□□□ -0.24
CDC42BPB-202ENST00000558321 ARSHQ5FYA8 562 aa13.56□□□□□ -0.24
CDC42BPB-202ENST00000558321 GLRA4Q5JXX5 417 aa13.56□□□□□ -0.24
CDC42BPB-202ENST00000558321 MPZL3Q6UWV2 235 aa13.56□□□□□ -0.24
CDC42BPB-202ENST00000558321 SPATA31D4Q6ZUB0 917 aa13.56□□□□□ -0.24
CDC42BPB-202ENST00000558321 TAS1R3Q7RTX0 852 aa13.56□□□□□ -0.24
CDC42BPB-202ENST00000558321 GPR149Q86SP6 731 aa13.56□□□□□ -0.24
CDC42BPB-202ENST00000558321 MYCT1Q8N699 235 aa13.56□□□□□ -0.24
CDC42BPB-202ENST00000558321 BICD1Q96G01 975 aa13.56□□□□□ -0.24
CDC42BPB-202ENST00000558321 ZBTB45Q96K62 511 aaPredicted RBP13.56□□□□□ -0.24
CDC42BPB-202ENST00000558321 ACAP3Q96P50 834 aa13.56□□□□□ -0.24
CDC42BPB-202ENST00000558321 TTPALQ9BTX7 342 aa13.56□□□□□ -0.24
CDC42BPB-202ENST00000558321 PTPRHQ9HD43 1115 aa13.56□□□□□ -0.24
CDC42BPB-202ENST00000558321 FNIP2Q9P278 1114 aa13.56□□□□□ -0.24
CDC42BPB-202ENST00000558321 SMIM28A0A1B0GU29 152 aa13.55□□□□□ -0.24
CDC42BPB-202ENST00000558321 CCDC195A0A1B0GUA6 201 aa13.55□□□□□ -0.24
CDC42BPB-202ENST00000558321 CLDN3O15551 220 aa13.55□□□□□ -0.24
CDC42BPB-202ENST00000558321 MAPTP10636 758 aaKnown RBP13.55□□□□□ -0.24
CDC42BPB-202ENST00000558321 RPL17P18621 184 aaKnown RBP13.55□□□□□ -0.24
CDC42BPB-202ENST00000558321 PLCG1P19174 1290 aa13.55□□□□□ -0.24
CDC42BPB-202ENST00000558321 MARCKSP29966 332 aaPredicted RBP13.55□□□□□ -0.24
CDC42BPB-202ENST00000558321 ZXDAP98168 799 aa13.55□□□□□ -0.24
CDC42BPB-202ENST00000558321 RESTQ13127 1097 aa13.55□□□□□ -0.24
CDC42BPB-202ENST00000558321 MCM6Q14566 821 aa13.55□□□□□ -0.24
CDC42BPB-202ENST00000558321 FAM173BQ6P4H8 233 aa13.55□□□□□ -0.24
CDC42BPB-202ENST00000558321 DCLRE1AQ6PJP8 1040 aa13.55□□□□□ -0.24
CDC42BPB-202ENST00000558321 PRSS55Q6UWB4 352 aaPredicted RBP13.55□□□□□ -0.24
CDC42BPB-202ENST00000558321 GPR65Q8IYL9 337 aa13.55□□□□□ -0.24
CDC42BPB-202ENST00000558321 CEP120Q8N960 986 aa13.55□□□□□ -0.24
CDC42BPB-202ENST00000558321 TDRD5Q8NAT2 981 aaKnown RBP13.55□□□□□ -0.24
CDC42BPB-202ENST00000558321 TMEM161BQ8NDZ6 487 aa13.55□□□□□ -0.24
CDC42BPB-202ENST00000558321 RAD54LQ92698 747 aa13.55□□□□□ -0.24
CDC42BPB-202ENST00000558321 ACSF2Q96CM8 615 aaPredicted RBP13.55□□□□□ -0.24
CDC42BPB-202ENST00000558321 UROC1Q96N76 676 aa13.55□□□□□ -0.24
CDC42BPB-202ENST00000558321 PPP1R10Q96QC0 940 aaKnown RBP13.55□□□□□ -0.24
CDC42BPB-202ENST00000558321 ANKFY1Q9P2R3 1169 aa13.55□□□□□ -0.24
CDC42BPB-202ENST00000558321 ODF2LQ9ULJ1 636 aa13.55□□□□□ -0.24
CDC42BPB-202ENST00000558321 C2CD4DB7Z1M9 353 aa13.54□□□□□ -0.24
CDC42BPB-202ENST00000558321 TRAPPC3O43617 180 aa13.54□□□□□ -0.24
CDC42BPB-202ENST00000558321 TOM1L1O75674 476 aa13.54□□□□□ -0.24
CDC42BPB-202ENST00000558321 TXLNAP40222 546 aa13.54□□□□□ -0.24
CDC42BPB-202ENST00000558321 CLCNKBP51801 687 aa13.54□□□□□ -0.24
CDC42BPB-202ENST00000558321 NAB2Q15742 525 aa13.54□□□□□ -0.24
CDC42BPB-202ENST00000558321 PTPN21Q16825 1174 aa13.54□□□□□ -0.24
CDC42BPB-202ENST00000558321 SPECC1Q5M775 1068 aa13.54□□□□□ -0.24
CDC42BPB-202ENST00000558321 RTP2Q5QGT7 225 aa13.54□□□□□ -0.24
CDC42BPB-202ENST00000558321 PDXDC1Q6P996 788 aa13.54□□□□□ -0.24
CDC42BPB-202ENST00000558321 ZPBP2Q6X784 338 aa13.54□□□□□ -0.24
CDC42BPB-202ENST00000558321 C15orf39Q6ZRI6 1047 aa13.54□□□□□ -0.24
CDC42BPB-202ENST00000558321 TRIM67Q6ZTA4 783 aa13.54□□□□□ -0.24
CDC42BPB-202ENST00000558321 CCDC149Q6ZUS6 474 aa13.54□□□□□ -0.24
CDC42BPB-202ENST00000558321 HAUS6Q7Z4H7 955 aa13.54□□□□□ -0.24
CDC42BPB-202ENST00000558321 PLCD3Q8N3E9 789 aa13.54□□□□□ -0.24
CDC42BPB-202ENST00000558321 DDX27Q96GQ7 796 aaKnown RBP13.54□□□□□ -0.24
CDC42BPB-202ENST00000558321 EPSTI1Q96J88 318 aa13.54□□□□□ -0.24
CDC42BPB-202ENST00000558321 MFSD14AQ96MC6 490 aa13.54□□□□□ -0.24
CDC42BPB-202ENST00000558321 REEP2Q9BRK0 252 aa13.54□□□□□ -0.24
CDC42BPB-202ENST00000558321 CCSER1Q9C0I3 900 aa13.54□□□□□ -0.24
CDC42BPB-202ENST00000558321 PLEKHA4Q9H4M7 779 aa13.54□□□□□ -0.24
CDC42BPB-202ENST00000558321 PIDD1Q9HB75 910 aa13.54□□□□□ -0.24
CDC42BPB-202ENST00000558321 PARVGQ9HBI0 331 aa13.54□□□□□ -0.24
CDC42BPB-202ENST00000558321 BLOC1S4Q9NUP1 217 aa13.54□□□□□ -0.24
CDC42BPB-202ENST00000558321 SLC38A7Q9NVC3 462 aa13.54□□□□□ -0.24
CDC42BPB-202ENST00000558321 CCDC39Q9UFE4 941 aa13.54□□□□□ -0.24
CDC42BPB-202ENST00000558321 LIMD1Q9UGP4 676 aa13.54□□□□□ -0.24
CDC42BPB-202ENST00000558321 TDRD15B5MCY1 1934 aaKnown RBP13.53□□□□□ -0.24
CDC42BPB-202ENST00000558321 TMEM221A6NGB7 291 aa13.53□□□□□ -0.24
CDC42BPB-202ENST00000558321 M0R296 226 aa13.53□□□□□ -0.24
CDC42BPB-202ENST00000558321 TGM5O43548 720 aa13.53□□□□□ -0.24
CDC42BPB-202ENST00000558321 TBCAO75347 108 aaKnown RBP13.53□□□□□ -0.24
CDC42BPB-202ENST00000558321 BRD1O95696 1058 aa13.53□□□□□ -0.24
CDC42BPB-202ENST00000558321 HSP90AA1P07900 732 aaKnown RBP13.53□□□□□ -0.24
CDC42BPB-202ENST00000558321 PROZP22891 400 aa13.53□□□□□ -0.24
CDC42BPB-202ENST00000558321 DDIT3P35638 169 aa13.53□□□□□ -0.24
CDC42BPB-202ENST00000558321 LIG4P49917 911 aa13.53□□□□□ -0.24
CDC42BPB-202ENST00000558321 NOLC1Q14978 699 aaKnown RBP eCLIP13.53□□□□□ -0.24
CDC42BPB-202ENST00000558321 PTPAQ15257 358 aa13.53□□□□□ -0.24
CDC42BPB-202ENST00000558321 PSMD5Q16401 504 aa13.53□□□□□ -0.24
CDC42BPB-202ENST00000558321 SEZ6Q53EL9 994 aa13.53□□□□□ -0.24
CDC42BPB-202ENST00000558321 RRAGBQ5VZM2 374 aa13.53□□□□□ -0.24
CDC42BPB-202ENST00000558321 ALKAL1Q6UXT8 129 aa13.53□□□□□ -0.24
CDC42BPB-202ENST00000558321 HFE2Q6ZVN8 426 aa13.53□□□□□ -0.24
CDC42BPB-202ENST00000558321 OTOP3Q7RTS5 596 aa13.53□□□□□ -0.24
CDC42BPB-202ENST00000558321 KRI1Q8N9T8 703 aaKnown RBP13.53□□□□□ -0.24
CDC42BPB-202ENST00000558321 KREMEN2Q8NCW0 462 aa13.53□□□□□ -0.24
CDC42BPB-202ENST00000558321 CMASQ8NFW8 434 aaPredicted RBP13.53□□□□□ -0.24
CDC42BPB-202ENST00000558321 HDAC7Q8WUI4 952 aa13.53□□□□□ -0.24
CDC42BPB-202ENST00000558321 PIK3R5Q8WYR1 880 aa13.53□□□□□ -0.24
CDC42BPB-202ENST00000558321 LARP4BQ92615 738 aaKnown RBP13.53□□□□□ -0.24
CDC42BPB-202ENST00000558321 PBXIP1Q96AQ6 731 aa13.53□□□□□ -0.24
CDC42BPB-202ENST00000558321 SNX27Q96L92 541 aa13.53□□□□□ -0.24
CDC42BPB-202ENST00000558321 ZSCAN16Q9H4T2 348 aaPredicted RBP13.53□□□□□ -0.24
CDC42BPB-202ENST00000558321 GOLGA2P5Q9HBQ8 144 aa13.53□□□□□ -0.24
CDC42BPB-202ENST00000558321 MTMR6Q9Y217 621 aa13.53□□□□□ -0.24
CDC42BPB-202ENST00000558321 USTQ9Y2C2 406 aa13.53□□□□□ -0.24
CDC42BPB-202ENST00000558321 SRPRBQ9Y5M8 271 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms