RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 PRKAG3Q9UGI9 489 aa5.41□□□□□ -1.54
HMG20A-204ENST00000558288 DNAJC12Q9UKB3 198 aa5.41□□□□□ -1.54
HMG20A-204ENST00000558288 PHTF1Q9UMS5 762 aa5.41□□□□□ -1.54
HMG20A-204ENST00000558288 USH1CQ9Y6N9 552 aa5.41□□□□□ -1.54
HMG20A-204ENST00000558288 ASTN2O75129 1339 aaPredicted RBP5.41□□□□□ -1.54
HMG20A-204ENST00000558288 DOCK2Q92608 1830 aa5.4□□□□□ -1.54
HMG20A-204ENST00000558288 QSER1Q2KHR3 1735 aa5.4□□□□□ -1.54
HMG20A-204ENST00000558288 WDR90Q96KV7 1748 aa5.4□□□□□ -1.54
HMG20A-204ENST00000558288 TCRBV7S2A1N4TA0A589 114 aa5.4□□□□□ -1.54
HMG20A-204ENST00000558288 PALM3A6NDB9 673 aaPredicted RBP5.4□□□□□ -1.54
HMG20A-204ENST00000558288 MEIS1O00470 390 aa5.4□□□□□ -1.54
HMG20A-204ENST00000558288 AKAP3O75969 853 aa5.4□□□□□ -1.54
HMG20A-204ENST00000558288 GCNT3O95395 438 aa5.4□□□□□ -1.54
HMG20A-204ENST00000558288 ZCCHC18P0CG32 403 aa5.4□□□□□ -1.54
HMG20A-204ENST00000558288 CHKAP35790 457 aa5.4□□□□□ -1.54
HMG20A-204ENST00000558288 COILP38432 576 aaPredicted RBP5.4□□□□□ -1.54
HMG20A-204ENST00000558288 VHLP40337 213 aa5.4□□□□□ -1.54
HMG20A-204ENST00000558288 MARSP56192 900 aaKnown RBP5.4□□□□□ -1.54
HMG20A-204ENST00000558288 CDR2Q01850 454 aa5.4□□□□□ -1.54
HMG20A-204ENST00000558288 KRT17Q04695 432 aa5.4□□□□□ -1.54
HMG20A-204ENST00000558288 PABPC4Q13310 644 aaKnown RBP eCLIP5.4□□□□□ -1.54
HMG20A-204ENST00000558288 DYNC1I2Q13409 638 aaKnown RBP5.4□□□□□ -1.54
HMG20A-204ENST00000558288 PDIA5Q14554 519 aa5.4□□□□□ -1.54
HMG20A-204ENST00000558288 EPHA7Q15375 998 aa5.4□□□□□ -1.54
HMG20A-204ENST00000558288 SGSM1Q2NKQ1 1148 aa5.4□□□□□ -1.54
HMG20A-204ENST00000558288 EDRF1Q3B7T1 1238 aa5.4□□□□□ -1.54
HMG20A-204ENST00000558288 TBC1D25Q3MII6 688 aa5.4□□□□□ -1.54
HMG20A-204ENST00000558288 TAF1BQ53T94 588 aaPredicted RBP5.4□□□□□ -1.54
HMG20A-204ENST00000558288 SNX30Q5VWJ9 437 aa5.4□□□□□ -1.54
HMG20A-204ENST00000558288 ZNF746Q6NUN9 644 aaPredicted RBP5.4□□□□□ -1.54
HMG20A-204ENST00000558288 IRGCQ6NXR0 463 aa5.4□□□□□ -1.54
HMG20A-204ENST00000558288 SAMD1Q6SPF0 538 aaPredicted RBP5.4□□□□□ -1.54
HMG20A-204ENST00000558288 PPP4R3CPQ6ZMV5 832 aa5.4□□□□□ -1.54
HMG20A-204ENST00000558288 RNF207Q6ZRF8 634 aa5.4□□□□□ -1.54
HMG20A-204ENST00000558288 RFX8Q6ZV50 586 aa5.4□□□□□ -1.54
HMG20A-204ENST00000558288 SFR1Q86XK3 245 aa5.4□□□□□ -1.54
HMG20A-204ENST00000558288 APLFQ8IW19 511 aaPredicted RBP5.4□□□□□ -1.54
HMG20A-204ENST00000558288 CYP4X1Q8N118 509 aa5.4□□□□□ -1.54
HMG20A-204ENST00000558288 FAM81AQ8TBF8 368 aa5.4□□□□□ -1.54
HMG20A-204ENST00000558288 SCG3Q8WXD2 468 aaKnown RBP5.4□□□□□ -1.54
HMG20A-204ENST00000558288 MCUR1Q96AQ8 359 aa5.4□□□□□ -1.54
HMG20A-204ENST00000558288 PWWP2AQ96N64 755 aa5.4□□□□□ -1.54
HMG20A-204ENST00000558288 FAM210AQ96ND0 272 aa5.4□□□□□ -1.54
HMG20A-204ENST00000558288 CCDC77Q9BR77 488 aa5.4□□□□□ -1.54
HMG20A-204ENST00000558288 TMEM109Q9BVC6 243 aa5.4□□□□□ -1.54
HMG20A-204ENST00000558288 ADAM33Q9BZ11 813 aa5.4□□□□□ -1.54
HMG20A-204ENST00000558288 DCLRE1BQ9H816 532 aa5.4□□□□□ -1.54
HMG20A-204ENST00000558288 SLCO1B3Q9NPD5 702 aa5.4□□□□□ -1.54
HMG20A-204ENST00000558288 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.4□□□□□ -1.546e-20■■■■■ 109
HMG20A-204ENST00000558288 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.4□□□□□ -1.54
HMG20A-204ENST00000558288 ZFP69BQ9UJL9 534 aa5.4□□□□□ -1.54
HMG20A-204ENST00000558288 CHKBQ9Y259 395 aa5.4□□□□□ -1.54
HMG20A-204ENST00000558288 LRCH1Q9Y2L9 728 aa5.4□□□□□ -1.54
HMG20A-204ENST00000558288 CACNA1SQ13698 1873 aa5.4□□□□□ -1.54
HMG20A-204ENST00000558288 GPR75-ASB3A0A0A6YYF3 556 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 POTEFA5A3E0 1075 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 CAPN9O14815 690 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 CREB3O43889 395 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 RAD21O60216 631 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 LMNAP02545 664 aaKnown RBP5.4□□□□□ -1.55
HMG20A-204ENST00000558288 NR3C1P04150 777 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 TAC1P20366 129 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 RPL13P26373 211 aaKnown RBP5.4□□□□□ -1.55
HMG20A-204ENST00000558288 MARK3P27448 753 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 FOXN2P32314 431 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 ADCY8P40145 1251 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 KNOP1Q1ED39 458 aaKnown RBP5.4□□□□□ -1.55
HMG20A-204ENST00000558288 WASHC2DQ5SRD0 308 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 POTEGQ6S5H5 508 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 POTEEQ6S8J3 1075 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 CAPN12Q6ZSI9 719 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 CCNJLQ8IV13 435 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 SCYL3Q8IZE3 742 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 ANKRD35Q8N283 1001 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 ANKLE1Q8NAG6 615 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 TGFBRAP1Q8WUH2 860 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 ZFAND2BQ8WV99 257 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 ART4Q93070 314 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 RBM41Q96IZ5 413 aaKnown RBP5.4□□□□□ -1.55
HMG20A-204ENST00000558288 DDX50Q9BQ39 737 aaKnown RBP5.4□□□□□ -1.55
HMG20A-204ENST00000558288 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.4□□□□□ -1.55
HMG20A-204ENST00000558288 POLLQ9UGP5 575 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 COG5Q9UP83 839 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 ASB3Q9Y575 518 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 KDM3AQ9Y4C1 1321 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 FAM196BA6NMK8 535 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 MIF4GDA9UHW6 222 aaKnown RBP5.4□□□□□ -1.55
HMG20A-204ENST00000558288 POC1B-GALNT4F8VUJ3 575 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 ATMINO43313 823 aaPredicted RBP5.4□□□□□ -1.55
HMG20A-204ENST00000558288 PYGMP11217 842 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 KRT15P19012 456 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 CYP11B2P19099 503 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 COMTP21964 271 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 ANXA13P27216 316 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 HOXA7P31268 230 aaPredicted RBP5.4□□□□□ -1.55
HMG20A-204ENST00000558288 STAT3P40763 770 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 HIRAP54198 1017 aaPredicted RBP5.4□□□□□ -1.55
HMG20A-204ENST00000558288 PPATQ06203 517 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 CCDC15Q0P6D6 951 aa5.4□□□□□ -1.55
HMG20A-204ENST00000558288 SEPT7Q16181 437 aaKnown RBP5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms