RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 GBA2Q9HCG7 927 aaPredicted RBP7.68□□□□□ -1.18
RTF1-204ENST00000558117 EMC7Q9NPA0 242 aa7.68□□□□□ -1.18
RTF1-204ENST00000558117 RGPD2P0DJD1 1756 aa7.68□□□□□ -1.18
RTF1-204ENST00000558117 KTN1Q86UP2 1357 aaKnown RBP7.68□□□□□ -1.18
RTF1-204ENST00000558117 COL11A2P13942 1736 aaPredicted RBP7.67□□□□□ -1.18
RTF1-204ENST00000558117 POU3F3P20264 500 aaPredicted RBP7.67□□□□□ -1.18
RTF1-204ENST00000558117 RRADP55042 308 aa7.67□□□□□ -1.18
RTF1-204ENST00000558117 ZMAT1Q5H9K5 638 aa7.67□□□□□ -1.18
RTF1-204ENST00000558117 GRAMD4Q6IC98 578 aa7.67□□□□□ -1.18
RTF1-204ENST00000558117 FILIP1Q7Z7B0 1213 aa7.67□□□□□ -1.18
RTF1-204ENST00000558117 MAML3Q96JK9 1138 aa7.67□□□□□ -1.18
RTF1-204ENST00000558117 SCYL1Q96KG9 808 aa7.67□□□□□ -1.18
RTF1-204ENST00000558117 TUBGCP5Q96RT8 1024 aa7.67□□□□□ -1.18
RTF1-204ENST00000558117 ZDHHC5Q9C0B5 715 aa7.67□□□□□ -1.18
RTF1-204ENST00000558117 CNOT11Q9UKZ1 510 aaKnown RBP7.67□□□□□ -1.18
RTF1-204ENST00000558117 TRIM17Q9Y577 477 aa7.67□□□□□ -1.18
RTF1-204ENST00000558117 BDP1A6H8Y1 2624 aa7.67□□□□□ -1.18
RTF1-204ENST00000558117 RPTORQ8N122 1335 aa7.67□□□□□ -1.18
RTF1-204ENST00000558117 COL4A5P29400 1685 aa7.67□□□□□ -1.18
RTF1-204ENST00000558117 A0A0G2JNJ9 132 aa7.66□□□□□ -1.18
RTF1-204ENST00000558117 ZNF888P0CJ79 500 aaPredicted RBP7.66□□□□□ -1.18
RTF1-204ENST00000558117 SRGNP10124 158 aa7.66□□□□□ -1.18
RTF1-204ENST00000558117 CNGA1P29973 690 aa7.66□□□□□ -1.18
RTF1-204ENST00000558117 MEOX1P50221 254 aa7.66□□□□□ -1.18
RTF1-204ENST00000558117 MOGSQ13724 837 aa7.66□□□□□ -1.18
RTF1-204ENST00000558117 TTC38Q5R3I4 469 aa7.66□□□□□ -1.18
RTF1-204ENST00000558117 OLFM4Q6UX06 510 aa7.66□□□□□ -1.18
RTF1-204ENST00000558117 RASAL3Q86YV0 1011 aa7.66□□□□□ -1.18
RTF1-204ENST00000558117 RTKN2Q8IZC4 609 aa7.66□□□□□ -1.18
RTF1-204ENST00000558117 ZNF333Q96JL9 665 aa7.66□□□□□ -1.18
RTF1-204ENST00000558117 MPHOSPH9Q99550 1183 aa7.66□□□□□ -1.18
RTF1-204ENST00000558117 SEMA4AQ9H3S1 761 aa7.66□□□□□ -1.18
RTF1-204ENST00000558117 SPC25Q9HBM1 224 aa7.66□□□□□ -1.18
RTF1-204ENST00000558117 GPRC5DQ9NZD1 345 aa7.66□□□□□ -1.18
RTF1-204ENST00000558117 Q9UFV3 132 aa7.66□□□□□ -1.18
RTF1-204ENST00000558117 NARFQ9UHQ1 456 aa7.66□□□□□ -1.18
RTF1-204ENST00000558117 CDC42EP3Q9UKI2 254 aa7.66□□□□□ -1.18
RTF1-204ENST00000558117 PTPN22Q9Y2R2 807 aa7.66□□□□□ -1.18
RTF1-204ENST00000558117 BCORQ6W2J9 1755 aa7.66□□□□□ -1.18
RTF1-204ENST00000558117 ANKRD31Q8N7Z5 1873 aa7.66□□□□□ -1.18
RTF1-204ENST00000558117 NPEPPSL1A6NEC2 478 aa7.65□□□□□ -1.18
RTF1-204ENST00000558117 NCANO14594 1321 aa7.65□□□□□ -1.18
RTF1-204ENST00000558117 PRRG2O14669 202 aa7.65□□□□□ -1.18
RTF1-204ENST00000558117 EYA4O95677 639 aa7.65□□□□□ -1.18
RTF1-204ENST00000558117 ITGB3P05106 788 aa7.65□□□□□ -1.18
RTF1-204ENST00000558117 CDK11BP21127 795 aaKnown RBP7.65□□□□□ -1.18
RTF1-204ENST00000558117 OCRLQ01968 901 aa7.65□□□□□ -1.18
RTF1-204ENST00000558117 ADCY1Q08828 1119 aa7.65□□□□□ -1.18
RTF1-204ENST00000558117 MYBPC3Q14896 1274 aa7.65□□□□□ -1.18
RTF1-204ENST00000558117 TERF2Q15554 542 aa7.65□□□□□ -1.18
RTF1-204ENST00000558117 ATP13A4Q4VNC1 1196 aa7.65□□□□□ -1.18
RTF1-204ENST00000558117 CT47A1Q5JQC4 288 aaPredicted RBP7.65□□□□□ -1.18
RTF1-204ENST00000558117 PRAMEF9Q5VWM5 478 aa7.65□□□□□ -1.18
RTF1-204ENST00000558117 TMEM200BQ69YZ2 307 aa7.65□□□□□ -1.18
RTF1-204ENST00000558117 PRR5LQ6MZQ0 368 aa7.65□□□□□ -1.18
RTF1-204ENST00000558117 MON2Q7Z3U7 1717 aa7.65□□□□□ -1.18
RTF1-204ENST00000558117 ZZZ3Q8IYH5 903 aa7.65□□□□□ -1.18
RTF1-204ENST00000558117 C7orf31Q8N865 590 aa7.65□□□□□ -1.18
RTF1-204ENST00000558117 JDP2Q8WYK2 163 aa7.65□□□□□ -1.18
RTF1-204ENST00000558117 TTC1Q99614 292 aa7.65□□□□□ -1.18
RTF1-204ENST00000558117 IFT22Q9H7X7 185 aa7.65□□□□□ -1.18
RTF1-204ENST00000558117 CENPJQ9HC77 1338 aaPredicted RBP7.65□□□□□ -1.18
RTF1-204ENST00000558117 SLC4A7Q9Y6M7 1214 aa7.65□□□□□ -1.18
RTF1-204ENST00000558117 NCOR1O75376 2440 aa7.64□□□□□ -1.19
RTF1-204ENST00000558117 MUC6Q6W4X9 2439 aa7.64□□□□□ -1.19
RTF1-204ENST00000558117 CACNA1SQ13698 1873 aa7.64□□□□□ -1.19
RTF1-204ENST00000558117 SOS1Q07889 1333 aaPredicted RBP7.64□□□□□ -1.19
RTF1-204ENST00000558117 DNAJC6O75061 913 aa7.64□□□□□ -1.19
RTF1-204ENST00000558117 CD40P25942 277 aa7.64□□□□□ -1.19
RTF1-204ENST00000558117 EPHB4P54760 987 aa7.64□□□□□ -1.19
RTF1-204ENST00000558117 NFKB2Q00653 900 aa7.64□□□□□ -1.19
RTF1-204ENST00000558117 LRRC32Q14392 662 aa7.64□□□□□ -1.19
RTF1-204ENST00000558117 NOLC1Q14978 699 aaKnown RBP eCLIP7.64□□□□□ -1.19
RTF1-204ENST00000558117 BROXQ5VW32 411 aa7.64□□□□□ -1.19
RTF1-204ENST00000558117 SLFN13Q68D06 897 aa7.64□□□□□ -1.19
RTF1-204ENST00000558117 SLFN12LQ6IEE8 588 aa7.64□□□□□ -1.19
RTF1-204ENST00000558117 LHFPL2Q6ZUX7 228 aa7.64□□□□□ -1.19
RTF1-204ENST00000558117 C11orf74Q86VG3 221 aa7.64□□□□□ -1.19
RTF1-204ENST00000558117 MASTLQ96GX5 879 aa7.64□□□□□ -1.19
RTF1-204ENST00000558117 ZNF496Q96IT1 587 aaPredicted RBP7.64□□□□□ -1.19
RTF1-204ENST00000558117 GUCD1Q96NT3 240 aa7.64□□□□□ -1.19
RTF1-204ENST00000558117 MAGEL2Q9UJ55 1249 aa7.64□□□□□ -1.19
RTF1-204ENST00000558117 ZEB2O60315 1214 aa7.63□□□□□ -1.19
RTF1-204ENST00000558117 TM4SF4P48230 202 aa7.63□□□□□ -1.19
RTF1-204ENST00000558117 AMPHP49418 695 aa7.63□□□□□ -1.19
RTF1-204ENST00000558117 EIF4HQ15056 248 aaKnown RBP7.63□□□□□ -1.19
RTF1-204ENST00000558117 LRIT3Q3SXY7 679 aa7.63□□□□□ -1.19
RTF1-204ENST00000558117 GPR158Q5T848 1215 aa7.63□□□□□ -1.19
RTF1-204ENST00000558117 UNQ6494/PRO21346Q6UXR6 183 aa7.63□□□□□ -1.19
RTF1-204ENST00000558117 PHYKPLQ8IUZ5 450 aa7.63□□□□□ -1.19
RTF1-204ENST00000558117 BCL6BQ8N143 479 aaPredicted RBP7.63□□□□□ -1.19
RTF1-204ENST00000558117 RPGRQ92834 1020 aaKnown RBP7.63□□□□□ -1.19
RTF1-204ENST00000558117 LOXL4Q96JB6 756 aa7.63□□□□□ -1.19
RTF1-204ENST00000558117 MYL10Q9BUA6 226 aa7.63□□□□□ -1.19
RTF1-204ENST00000558117 POFUT1Q9H488 388 aa7.63□□□□□ -1.19
RTF1-204ENST00000558117 STAP2Q9UGK3 403 aa7.63□□□□□ -1.19
RTF1-204ENST00000558117 SNED1Q8TER0 1413 aa7.62□□□□□ -1.19
RTF1-204ENST00000558117 KRTAP9-7A8MTY7 169 aa7.62□□□□□ -1.19
RTF1-204ENST00000558117 ELL2O00472 640 aaPredicted RBP7.62□□□□□ -1.19
RTF1-204ENST00000558117 MAFO75444 373 aaPredicted RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms