RNA–Protein interactions for RNA: ENST00000558103.1

CLPX-202, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 5

Gene CLPX, Length 605 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-202ENST00000558103 MAP3K21Q5TCX8 1036 aa7.33□□□□□ -1.24
CLPX-202ENST00000558103 ADGRA1Q86SQ6 560 aa7.33□□□□□ -1.24
CLPX-202ENST00000558103 DCP2Q8IU60 420 aaKnown RBP7.33□□□□□ -1.24
CLPX-202ENST00000558103 TEX11Q8IYF3 940 aa7.33□□□□□ -1.24
CLPX-202ENST00000558103 SH3RF3Q8TEJ3 882 aaPredicted RBP7.33□□□□□ -1.24
CLPX-202ENST00000558103 TRIB2Q92519 343 aa7.33□□□□□ -1.24
CLPX-202ENST00000558103 ALG3Q92685 438 aa7.33□□□□□ -1.24
CLPX-202ENST00000558103 CHAMP1Q96JM3 812 aa7.33□□□□□ -1.24
CLPX-202ENST00000558103 SRPK1Q96SB4 655 aaKnown RBP7.33□□□□□ -1.24
CLPX-202ENST00000558103 GDF15Q99988 308 aa7.33□□□□□ -1.24
CLPX-202ENST00000558103 RNF38Q9H0F5 515 aa7.33□□□□□ -1.24
CLPX-202ENST00000558103 IRF2BPLQ9H1B7 796 aa7.33□□□□□ -1.24
CLPX-202ENST00000558103 DHX36Q9H2U1 1008 aaKnown RBP7.33□□□□□ -1.24
CLPX-202ENST00000558103 AS3MTQ9HBK9 375 aa7.33□□□□□ -1.24
CLPX-202ENST00000558103 EPB41L4AQ9HCS5 686 aaPredicted RBP7.33□□□□□ -1.24
CLPX-202ENST00000558103 AATFQ9NY61 560 aaKnown RBP eCLIP7.33□□□□□ -1.24
CLPX-202ENST00000558103 SNTG2Q9NY99 539 aa7.33□□□□□ -1.24
CLPX-202ENST00000558103 RAI14Q9P0K7 980 aa7.33□□□□□ -1.24
CLPX-202ENST00000558103 FBXL7Q9UJT9 491 aa7.33□□□□□ -1.24
CLPX-202ENST00000558103 PLA2G2DQ9UNK4 145 aa7.33□□□□□ -1.24
CLPX-202ENST00000558103 BAZ2AQ9UIF9 1905 aaKnown RBP7.33□□□□□ -1.24
CLPX-202ENST00000558103 RPTORQ8N122 1335 aa7.32□□□□□ -1.24
CLPX-202ENST00000558103 SGSM2O43147 1006 aa7.32□□□□□ -1.24
CLPX-202ENST00000558103 GNAI2P04899 355 aa7.32□□□□□ -1.24
CLPX-202ENST00000558103 ASGR2P07307 311 aa7.32□□□□□ -1.24
CLPX-202ENST00000558103 ASNSP08243 561 aa7.32□□□□□ -1.24
CLPX-202ENST00000558103 FAM153BP0C7A2 387 aa7.32□□□□□ -1.24
CLPX-202ENST00000558103 UQCRFS1P1P0C7P4 283 aa7.32□□□□□ -1.24
CLPX-202ENST00000558103 PI3P19957 117 aa7.32□□□□□ -1.24
CLPX-202ENST00000558103 SLC6A11P48066 632 aa7.32□□□□□ -1.24
CLPX-202ENST00000558103 LONRF2Q1L5Z9 754 aa7.32□□□□□ -1.24
CLPX-202ENST00000558103 SHROOM1Q2M3G4 852 aaPredicted RBP7.32□□□□□ -1.24
CLPX-202ENST00000558103 GORABQ5T7V8 394 aa7.32□□□□□ -1.24
CLPX-202ENST00000558103 ATF7IPQ6VMQ6 1270 aa7.32□□□□□ -1.24
CLPX-202ENST00000558103 NECAB2Q7Z6G3 386 aa7.32□□□□□ -1.24
CLPX-202ENST00000558103 SIAH1Q8IUQ4 282 aa7.32□□□□□ -1.24
CLPX-202ENST00000558103 PHF20Q9BVI0 1012 aa7.32□□□□□ -1.24
CLPX-202ENST00000558103 AP5M1Q9H0R1 490 aa7.32□□□□□ -1.24
CLPX-202ENST00000558103 CDIP1Q9H305 208 aa7.32□□□□□ -1.24
CLPX-202ENST00000558103 BCAS3Q9H6U6 928 aa7.32□□□□□ -1.24
CLPX-202ENST00000558103 TXNRD2Q9NNW7 524 aa7.32□□□□□ -1.24
CLPX-202ENST00000558103 GPR108Q9NPR9 543 aa7.32□□□□□ -1.24
CLPX-202ENST00000558103 PI4KBQ9UBF8 816 aa7.32□□□□□ -1.24
CLPX-202ENST00000558103 OGDHLQ9ULD0 1010 aa7.32□□□□□ -1.24
CLPX-202ENST00000558103 FPGT-TNNI3KV9GXZ4 949 aa7.32□□□□□ -1.24
CLPX-202ENST00000558103 SPTBN5Q9NRC6 3674 aaKnown RBP7.31□□□□□ -1.24
CLPX-202ENST00000558103 PFASO15067 1338 aa7.31□□□□□ -1.24
CLPX-202ENST00000558103 RFXAPO00287 272 aa7.31□□□□□ -1.24
CLPX-202ENST00000558103 MSCO60682 206 aa7.31□□□□□ -1.24
CLPX-202ENST00000558103 BAG3O95817 575 aa7.31□□□□□ -1.24
CLPX-202ENST00000558103 ATF2P15336 505 aa7.31□□□□□ -1.24
CLPX-202ENST00000558103 HERVK_113P62684 666 aa7.31□□□□□ -1.24
CLPX-202ENST00000558103 G3BP1Q13283 466 aaKnown RBP eCLIP7.31□□□□□ -1.24
CLPX-202ENST00000558103 NAA16Q6N069 864 aaPredicted RBP7.31□□□□□ -1.24
CLPX-202ENST00000558103 CNKSR3Q6P9H4 555 aa7.31□□□□□ -1.24
CLPX-202ENST00000558103 KCNT2Q6UVM3 1135 aa7.31□□□□□ -1.24
CLPX-202ENST00000558103 FAM129CQ86XR2 697 aa7.31□□□□□ -1.24
CLPX-202ENST00000558103 MAPKAPK5Q8IW41 473 aa7.31□□□□□ -1.24
CLPX-202ENST00000558103 SSH3Q8TE77 659 aa7.31□□□□□ -1.24
CLPX-202ENST00000558103 TGFBRAP1Q8WUH2 860 aa7.31□□□□□ -1.24
CLPX-202ENST00000558103 SOCS4Q8WXH5 440 aa7.31□□□□□ -1.24
CLPX-202ENST00000558103 SEC14L1Q92503 715 aa7.31□□□□□ -1.24
CLPX-202ENST00000558103 USP6NLQ92738 828 aa7.31□□□□□ -1.24
CLPX-202ENST00000558103 IPO9Q96P70 1041 aaKnown RBP7.31□□□□□ -1.24
CLPX-202ENST00000558103 P2RX7Q99572 595 aaKnown RBP7.31□□□□□ -1.24
CLPX-202ENST00000558103 DNAJC7Q99615 494 aa7.31□□□□□ -1.24
CLPX-202ENST00000558103 CDC6Q99741 560 aa7.31□□□□□ -1.24
CLPX-202ENST00000558103 CLDND1Q9NY35 253 aa7.31□□□□□ -1.24
CLPX-202ENST00000558103 STAP2Q9UGK3 403 aa7.31□□□□□ -1.24
CLPX-202ENST00000558103 ZBTB21Q9ULJ3 1066 aa7.31□□□□□ -1.24
CLPX-202ENST00000558103 COA3Q9Y2R0 106 aaPredicted RBP7.31□□□□□ -1.24
CLPX-202ENST00000558103 GREB1LQ9C091 1923 aaPredicted RBP7.31□□□□□ -1.24
CLPX-202ENST00000558103 BLACEA4D250 179 aa7.3□□□□□ -1.24
CLPX-202ENST00000558103 C19orf81C9J6K1 198 aa7.3□□□□□ -1.24
CLPX-202ENST00000558103 BCAR3O75815 825 aa7.3□□□□□ -1.24
CLPX-202ENST00000558103 COL6A1P12109 1028 aa7.3□□□□□ -1.24
CLPX-202ENST00000558103 PMLP29590 882 aa7.3□□□□□ -1.24
CLPX-202ENST00000558103 IRX3P78415 501 aaPredicted RBP7.3□□□□□ -1.24
CLPX-202ENST00000558103 FAM209AQ5JX71 171 aa7.3□□□□□ -1.24
CLPX-202ENST00000558103 TTC39AQ5SRH9 613 aa7.3□□□□□ -1.24
CLPX-202ENST00000558103 FOXB2Q5VYV0 432 aa7.3□□□□□ -1.24
CLPX-202ENST00000558103 LBX2Q6XYB7 198 aa7.3□□□□□ -1.24
CLPX-202ENST00000558103 DPH6Q7L8W6 267 aa7.3□□□□□ -1.24
CLPX-202ENST00000558103 FOXP4Q8IVH2 680 aaPredicted RBP7.3□□□□□ -1.24
CLPX-202ENST00000558103 TMEM57Q8N5G2 664 aa7.3□□□□□ -1.24
CLPX-202ENST00000558103 CPA5Q8WXQ8 436 aa7.3□□□□□ -1.24
CLPX-202ENST00000558103 DACT3Q96B18 629 aaPredicted RBP7.3□□□□□ -1.24
CLPX-202ENST00000558103 C12orf42Q96LP6 360 aa7.3□□□□□ -1.24
CLPX-202ENST00000558103 ZFYVE21Q9BQ24 234 aa7.3□□□□□ -1.24
CLPX-202ENST00000558103 NOL10Q9BSC4 688 aaKnown RBP7.3□□□□□ -1.24
CLPX-202ENST00000558103 PORCNQ9H237 461 aa7.3□□□□□ -1.24
CLPX-202ENST00000558103 C11orf49Q9H6J7 331 aa7.3□□□□□ -1.24
CLPX-202ENST00000558103 TMOD4Q9NZQ9 345 aa7.3□□□□□ -1.24
CLPX-202ENST00000558103 RBPJLQ9UBG7 517 aa7.3□□□□□ -1.24
CLPX-202ENST00000558103 DBNLQ9UJU6 430 aaKnown RBP7.3□□□□□ -1.24
CLPX-202ENST00000558103 PALD1Q9ULE6 856 aa7.3□□□□□ -1.24
CLPX-202ENST00000558103 MUC3AQ02505 3323 aa7.3□□□□□ -1.24
CLPX-202ENST00000558103 TRBV23-1A0A0A0MS06 115 aa7.29□□□□□ -1.24
CLPX-202ENST00000558103 CCER2I3L3R5 266 aa7.29□□□□□ -1.24
CLPX-202ENST00000558103 IPO8O15397 1037 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms