RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 REXO4Q9GZR2 422 aaKnown RBP4.51□□□□□ -1.69
SPG11-206ENST00000558093 hCG_2014768A0A024R1R8 64 aa4.5□□□□□ -1.69
SPG11-206ENST00000558093 GRXCR1A8MXD5 290 aa4.5□□□□□ -1.69
SPG11-206ENST00000558093 DIRC3C9JPN6 131 aa4.5□□□□□ -1.69
SPG11-206ENST00000558093 RNASET2O00584 256 aaKnown RBP4.5□□□□□ -1.69
SPG11-206ENST00000558093 C5AR1P21730 350 aa4.5□□□□□ -1.69
SPG11-206ENST00000558093 GUCY1A2P33402 732 aa4.5□□□□□ -1.69
SPG11-206ENST00000558093 ACVRL1P37023 503 aa4.5□□□□□ -1.69
SPG11-206ENST00000558093 ANAPC15P60006 121 aa4.5□□□□□ -1.69
SPG11-206ENST00000558093 MXRA7P84157 204 aa4.5□□□□□ -1.69
SPG11-206ENST00000558093 KIF23Q02241 960 aaPredicted RBP4.5□□□□□ -1.69
SPG11-206ENST00000558093 CREMQ03060 361 aa4.5□□□□□ -1.69
SPG11-206ENST00000558093 KLF10Q13118 480 aa4.5□□□□□ -1.69
SPG11-206ENST00000558093 SEPT2Q15019 361 aa4.5□□□□□ -1.69
SPG11-206ENST00000558093 PCBP2Q15366 365 aaKnown RBP eCLIP4.5□□□□□ -1.69
SPG11-206ENST00000558093 INAVAQ3KP66 663 aa4.5□□□□□ -1.69
SPG11-206ENST00000558093 TIGD2Q4W5G0 525 aa4.5□□□□□ -1.69
SPG11-206ENST00000558093 FNDC7Q5VTL7 733 aa4.5□□□□□ -1.69
SPG11-206ENST00000558093 EFCAB2Q5VUJ9 269 aa4.5□□□□□ -1.69
SPG11-206ENST00000558093 ZNF529Q6P280 563 aa4.5□□□□□ -1.69
SPG11-206ENST00000558093 KCNV1Q6PIU1 500 aa4.5□□□□□ -1.69
SPG11-206ENST00000558093 RSPH3Q86UC2 560 aa4.5□□□□□ -1.69
SPG11-206ENST00000558093 PLXDC1Q8IUK5 500 aa4.5□□□□□ -1.69
SPG11-206ENST00000558093 FAM177A1Q8N128 213 aaPredicted RBP4.5□□□□□ -1.69
SPG11-206ENST00000558093 OR2I1PQ8NGU4 316 aa4.5□□□□□ -1.69
SPG11-206ENST00000558093 CASKIN2Q8WXE0 1202 aa4.5□□□□□ -1.69
SPG11-206ENST00000558093 HOXB13Q92826 284 aaPredicted RBP4.5□□□□□ -1.69
SPG11-206ENST00000558093 HDAC10Q969S8 669 aa4.5□□□□□ -1.69
SPG11-206ENST00000558093 TEKT5Q96M29 485 aa4.5□□□□□ -1.69
SPG11-206ENST00000558093 SLC46A2Q9BY10 475 aa4.5□□□□□ -1.69
SPG11-206ENST00000558093 TDP1Q9NUW8 608 aa4.5□□□□□ -1.69
SPG11-206ENST00000558093 NOP58Q9Y2X3 529 aaKnown RBP4.5□□□□□ -1.69
SPG11-206ENST00000558093 ACTL7AQ9Y615 435 aa4.5□□□□□ -1.69
SPG11-206ENST00000558093 POMCP01189 267 aa4.49□□□□□ -1.69
SPG11-206ENST00000558093 ALAS1P13196 640 aa4.49□□□□□ -1.69
SPG11-206ENST00000558093 LAG3P18627 525 aa4.49□□□□□ -1.69
SPG11-206ENST00000558093 FPR1P21462 350 aa4.49□□□□□ -1.69
SPG11-206ENST00000558093 CHN2P52757 468 aa4.49□□□□□ -1.69
SPG11-206ENST00000558093 UAP1L1Q3KQV9 507 aa4.49□□□□□ -1.69
SPG11-206ENST00000558093 LRRC55Q6ZSA7 311 aa4.49□□□□□ -1.69
SPG11-206ENST00000558093 PROKR1Q8TCW9 393 aa4.49□□□□□ -1.69
SPG11-206ENST00000558093 RAB24Q969Q5 203 aa4.49□□□□□ -1.69
SPG11-206ENST00000558093 TMX3Q96JJ7 454 aa4.49□□□□□ -1.69
SPG11-206ENST00000558093 BRINP2Q9C0B6 783 aa4.49□□□□□ -1.69
SPG11-206ENST00000558093 PCED1AQ9H1Q7 454 aa4.49□□□□□ -1.69
SPG11-206ENST00000558093 GPRC5BQ9NZH0 403 aa4.49□□□□□ -1.69
SPG11-206ENST00000558093 TUBD1Q9UJT1 453 aa4.49□□□□□ -1.69
SPG11-206ENST00000558093 ING1Q9UK53 422 aaPredicted RBP4.49□□□□□ -1.69
SPG11-206ENST00000558093 ATP11BQ9Y2G3 1177 aa4.49□□□□□ -1.69
SPG11-206ENST00000558093 SIK3Q9Y2K2 1263 aa4.49□□□□□ -1.69
SPG11-206ENST00000558093 USP15Q9Y4E8 981 aaPredicted RBP4.49□□□□□ -1.69
SPG11-206ENST00000558093 MYBBP1AQ9BQG0 1328 aaKnown RBP4.48□□□□□ -1.69
SPG11-206ENST00000558093 WASHC2CQ9Y4E1 1318 aa4.48□□□□□ -1.69
SPG11-206ENST00000558093 AHRRA9YTQ3 701 aa4.48□□□□□ -1.69
SPG11-206ENST00000558093 KIAA0391O15091 583 aaKnown RBP4.48□□□□□ -1.69
SPG11-206ENST00000558093 NCR1O76036 304 aa4.48□□□□□ -1.69
SPG11-206ENST00000558093 SNUPNO95149 360 aaKnown RBP4.48□□□□□ -1.69
SPG11-206ENST00000558093 ABHD16AO95870 558 aa4.48□□□□□ -1.69
SPG11-206ENST00000558093 SLPIP03973 132 aa4.48□□□□□ -1.69
SPG11-206ENST00000558093 ITGB1P05556 798 aa4.48□□□□□ -1.69
SPG11-206ENST00000558093 HLA-DOAP06340 250 aa4.48□□□□□ -1.69
SPG11-206ENST00000558093 NCLP19338 710 aaKnown RBP4.48□□□□□ -1.69
SPG11-206ENST00000558093 DDCP20711 480 aa4.48□□□□□ -1.69
SPG11-206ENST00000558093 PCSK1P29120 753 aa4.48□□□□□ -1.69
SPG11-206ENST00000558093 SLC6A9P48067 706 aa4.48□□□□□ -1.69
SPG11-206ENST00000558093 HMGA2P52926 109 aa4.48□□□□□ -1.69
SPG11-206ENST00000558093 KRT85P78386 507 aa4.48□□□□□ -1.69
SPG11-206ENST00000558093 PTPAQ15257 358 aa4.48□□□□□ -1.69
SPG11-206ENST00000558093 CSRP2Q16527 193 aa4.48□□□□□ -1.69
SPG11-206ENST00000558093 LY6G5CQ5SRR4 150 aa4.48□□□□□ -1.69
SPG11-206ENST00000558093 PPP4R3AQ6IN85 833 aa4.48□□□□□ -1.69
SPG11-206ENST00000558093 MED25Q71SY5 747 aa4.48□□□□□ -1.69
SPG11-206ENST00000558093 UBE3BQ7Z3V4 1068 aa4.48□□□□□ -1.69
SPG11-206ENST00000558093 ZBTB46Q86UZ6 589 aa4.48□□□□□ -1.69
SPG11-206ENST00000558093 SYT12Q8IV01 421 aa4.48□□□□□ -1.69
SPG11-206ENST00000558093 GPATCH3Q96I76 525 aa4.48□□□□□ -1.69
SPG11-206ENST00000558093 SORCS2Q96PQ0 1159 aa4.48□□□□□ -1.69
SPG11-206ENST00000558093 MRIQ9BWK5 157 aa4.48□□□□□ -1.69
SPG11-206ENST00000558093 ASPSCR1Q9BZE9 553 aa4.48□□□□□ -1.69
SPG11-206ENST00000558093 ZNF768Q9H5H4 540 aaKnown RBP4.48□□□□□ -1.69
SPG11-206ENST00000558093 AKIP1Q9NQ31 210 aa4.48□□□□□ -1.69
SPG11-206ENST00000558093 FZD1Q9UP38 647 aa4.48□□□□□ -1.69
SPG11-206ENST00000558093 ATRNL1Q5VV63 1379 aa4.48□□□□□ -1.69
SPG11-206ENST00000558093 GAGE12BA1L429 117 aa4.47□□□□□ -1.69
SPG11-206ENST00000558093 GAGE12HA6NDE8 117 aa4.47□□□□□ -1.69
SPG11-206ENST00000558093 CCDC154A6NI56 674 aa4.47□□□□□ -1.69
SPG11-206ENST00000558093 DRGXA6NNA5 263 aa4.47□□□□□ -1.69
SPG11-206ENST00000558093 ZNF185O15231 689 aa4.47□□□□□ -1.69
SPG11-206ENST00000558093 PCDHGA12O60330 932 aa4.47□□□□□ -1.69
SPG11-206ENST00000558093 NDUFA10O95299 355 aa4.47□□□□□ -1.69
SPG11-206ENST00000558093 RPLP2P05387 115 aaKnown RBP4.47□□□□□ -1.69
SPG11-206ENST00000558093 ZSCAN20P17040 1043 aaPredicted RBP4.47□□□□□ -1.69
SPG11-206ENST00000558093 NR4A1P22736 598 aa4.47□□□□□ -1.69
SPG11-206ENST00000558093 FAM189BP81408 668 aa4.47□□□□□ -1.69
SPG11-206ENST00000558093 CDC42EP1Q00587 391 aa4.47□□□□□ -1.69
SPG11-206ENST00000558093 MTM1Q13496 603 aa4.47□□□□□ -1.69
SPG11-206ENST00000558093 PDCD4Q53EL6 469 aaKnown RBP4.47□□□□□ -1.69
SPG11-206ENST00000558093 BRDTQ58F21 947 aaPredicted RBP4.47□□□□□ -1.69
SPG11-206ENST00000558093 OTUD7BQ6GQQ9 843 aa4.47□□□□□ -1.69
SPG11-206ENST00000558093 GADL1Q6ZQY3 521 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms