RNA–Protein interactions for RNA: ENST00000557966.1

AC027088.1-201, humanhuman

TSL 2 BASIC

Gene AC027088.1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027088.1-201ENST00000557966 RFPL2O75678 378 aa17.78■□□□□ 0.44
AC027088.1-201ENST00000557966 BMP15O95972 392 aa17.78■□□□□ 0.44
AC027088.1-201ENST00000557966 SPATA31D3P0C874 917 aa17.78■□□□□ 0.44
AC027088.1-201ENST00000557966 MAPTP10636 758 aaKnown RBP17.78■□□□□ 0.44
AC027088.1-201ENST00000557966 PLCG1P19174 1290 aa17.78■□□□□ 0.44
AC027088.1-201ENST00000557966 SOX4Q06945 474 aaPredicted RBP17.78■□□□□ 0.44
AC027088.1-201ENST00000557966 KARSQ15046 597 aaKnown RBP17.78■□□□□ 0.44
AC027088.1-201ENST00000557966 PTPAQ15257 358 aa17.78■□□□□ 0.44
AC027088.1-201ENST00000557966 XKR4Q5GH76 650 aa17.78■□□□□ 0.44
AC027088.1-201ENST00000557966 FAM171A1Q5VUB5 890 aa17.78■□□□□ 0.44
AC027088.1-201ENST00000557966 FAM173BQ6P4H8 233 aa17.78■□□□□ 0.44
AC027088.1-201ENST00000557966 MPZL3Q6UWV2 235 aa17.78■□□□□ 0.44
AC027088.1-201ENST00000557966 CD300LGQ6UXG3 332 aa17.78■□□□□ 0.44
AC027088.1-201ENST00000557966 SPATA31D4Q6ZUB0 917 aa17.78■□□□□ 0.44
AC027088.1-201ENST00000557966 PALB2Q86YC2 1186 aa17.78■□□□□ 0.44
AC027088.1-201ENST00000557966 GPR65Q8IYL9 337 aa17.78■□□□□ 0.44
AC027088.1-201ENST00000557966 TDRD5Q8NAT2 981 aaKnown RBP17.78■□□□□ 0.44
AC027088.1-201ENST00000557966 CMASQ8NFW8 434 aaPredicted RBP17.78■□□□□ 0.44
AC027088.1-201ENST00000557966 SNX27Q96L92 541 aa17.78■□□□□ 0.44
AC027088.1-201ENST00000557966 REEP2Q9BRK0 252 aa17.78■□□□□ 0.44
AC027088.1-201ENST00000557966 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.78■□□□□ 0.44
AC027088.1-201ENST00000557966 KCND2Q9NZV8 630 aa17.78■□□□□ 0.44
AC027088.1-201ENST00000557966 FNIP2Q9P278 1114 aa17.78■□□□□ 0.44
AC027088.1-201ENST00000557966 CLIC4Q9Y696 253 aa17.78■□□□□ 0.44
AC027088.1-201ENST00000557966 TMEM189-UBE2V1I3L0A0 370 aa17.77■□□□□ 0.44
AC027088.1-201ENST00000557966 BRD1O95696 1058 aa17.77■□□□□ 0.44
AC027088.1-201ENST00000557966 MCF2P10911 925 aa17.77■□□□□ 0.44
AC027088.1-201ENST00000557966 HARSP12081 509 aaKnown RBP17.77■□□□□ 0.44
AC027088.1-201ENST00000557966 SYT1P21579 422 aa17.77■□□□□ 0.44
AC027088.1-201ENST00000557966 LONP1P36776 959 aaKnown RBP17.77■□□□□ 0.44
AC027088.1-201ENST00000557966 PLA2G5P39877 138 aa17.77■□□□□ 0.44
AC027088.1-201ENST00000557966 UBA7P41226 1012 aa17.77■□□□□ 0.44
AC027088.1-201ENST00000557966 CLCNKBP51801 687 aa17.77■□□□□ 0.44
AC027088.1-201ENST00000557966 NCKAP1LP55160 1127 aa17.77■□□□□ 0.44
AC027088.1-201ENST00000557966 LILRA6Q6PI73 481 aa17.77■□□□□ 0.44
AC027088.1-201ENST00000557966 ALKAL1Q6UXT8 129 aa17.77■□□□□ 0.44
AC027088.1-201ENST00000557966 C15orf39Q6ZRI6 1047 aa17.77■□□□□ 0.44
AC027088.1-201ENST00000557966 APBB1IPQ7Z5R6 666 aaPredicted RBP17.77■□□□□ 0.44
AC027088.1-201ENST00000557966 GPBP1Q86WP2 473 aa17.77■□□□□ 0.44
AC027088.1-201ENST00000557966 C3orf58Q8NDZ4 430 aa17.77■□□□□ 0.44
AC027088.1-201ENST00000557966 LNX1Q8TBB1 728 aaPredicted RBP17.77■□□□□ 0.44
AC027088.1-201ENST00000557966 PIK3R5Q8WYR1 880 aa17.77■□□□□ 0.44
AC027088.1-201ENST00000557966 CALML4Q96GE6 196 aa17.77■□□□□ 0.44
AC027088.1-201ENST00000557966 ZMAT2Q96NC0 199 aaKnown RBP17.77■□□□□ 0.44
AC027088.1-201ENST00000557966 CCDC94Q9BW85 323 aaPredicted RBP17.77■□□□□ 0.44
AC027088.1-201ENST00000557966 SMOC2Q9H3U7 446 aa17.77■□□□□ 0.44
AC027088.1-201ENST00000557966 FOXD4L1Q9NU39 408 aa17.77■□□□□ 0.44
AC027088.1-201ENST00000557966 SMIM28A0A1B0GU29 152 aa17.76■□□□□ 0.43
AC027088.1-201ENST00000557966 ASGR2P07307 311 aa17.76■□□□□ 0.43
AC027088.1-201ENST00000557966 PDCP20941 246 aa17.76■□□□□ 0.43
AC027088.1-201ENST00000557966 SIGLEC14Q08ET2 396 aa17.76■□□□□ 0.43
AC027088.1-201ENST00000557966 DHX8Q14562 1220 aaKnown RBP17.76■□□□□ 0.43
AC027088.1-201ENST00000557966 MCM6Q14566 821 aa17.76■□□□□ 0.43
AC027088.1-201ENST00000557966 SEZ6Q53EL9 994 aa17.76■□□□□ 0.43
AC027088.1-201ENST00000557966 CCDC149Q6ZUS6 474 aa17.76■□□□□ 0.43
AC027088.1-201ENST00000557966 USP49Q70CQ1 688 aa17.76■□□□□ 0.43
AC027088.1-201ENST00000557966 CEP57Q86XR8 500 aa17.76■□□□□ 0.43
AC027088.1-201ENST00000557966 ZDHHC14Q8IZN3 488 aa17.76■□□□□ 0.43
AC027088.1-201ENST00000557966 KREMEN2Q8NCW0 462 aa17.76■□□□□ 0.43
AC027088.1-201ENST00000557966 RAD54LQ92698 747 aa17.76■□□□□ 0.43
AC027088.1-201ENST00000557966 ZNF707Q96C28 371 aaPredicted RBP17.76■□□□□ 0.43
AC027088.1-201ENST00000557966 ASIC4Q96FT7 647 aa17.76■□□□□ 0.43
AC027088.1-201ENST00000557966 CLSTN3Q9BQT9 956 aa17.76■□□□□ 0.43
AC027088.1-201ENST00000557966 TTPALQ9BTX7 342 aa17.76■□□□□ 0.43
AC027088.1-201ENST00000557966 HAPLN2Q9GZV7 340 aa17.76■□□□□ 0.43
AC027088.1-201ENST00000557966 ANKFY1Q9P2R3 1169 aa17.76■□□□□ 0.43
AC027088.1-201ENST00000557966 DAXXQ9UER7 740 aaPredicted RBP17.76■□□□□ 0.43
AC027088.1-201ENST00000557966 ODF2LQ9ULJ1 636 aa17.76■□□□□ 0.43
AC027088.1-201ENST00000557966 USTQ9Y2C2 406 aa17.76■□□□□ 0.43
AC027088.1-201ENST00000557966 ARIH1Q9Y4X5 557 aaPredicted RBP17.76■□□□□ 0.43
AC027088.1-201ENST00000557966 VWA8A3KMH1 1905 aa17.76■□□□□ 0.43
AC027088.1-201ENST00000557966 CCDC195A0A1B0GUA6 201 aa17.75■□□□□ 0.43
AC027088.1-201ENST00000557966 ADAM12O43184 909 aa17.75■□□□□ 0.43
AC027088.1-201ENST00000557966 TOM1L1O75674 476 aa17.75■□□□□ 0.43
AC027088.1-201ENST00000557966 PAPLNO95428 1278 aa17.75■□□□□ 0.43
AC027088.1-201ENST00000557966 SMTNP53814 917 aa17.75■□□□□ 0.43
AC027088.1-201ENST00000557966 YARSP54577 528 aaKnown RBP17.75■□□□□ 0.43
AC027088.1-201ENST00000557966 STRN3Q13033 797 aa17.75■□□□□ 0.43
AC027088.1-201ENST00000557966 PSMD5Q16401 504 aa17.75■□□□□ 0.43
AC027088.1-201ENST00000557966 UPP1Q16831 310 aa17.75■□□□□ 0.43
AC027088.1-201ENST00000557966 SPECC1Q5M775 1068 aa17.75■□□□□ 0.43
AC027088.1-201ENST00000557966 BMP8AQ7Z5Y6 402 aa17.75■□□□□ 0.43
AC027088.1-201ENST00000557966 HDAC7Q8WUI4 952 aa17.75■□□□□ 0.43
AC027088.1-201ENST00000557966 INTS4Q96HW7 963 aaKnown RBP17.75■□□□□ 0.43
AC027088.1-201ENST00000557966 TCHPQ9BT92 498 aa17.75■□□□□ 0.43
AC027088.1-201ENST00000557966 TOPORSQ9NS56 1045 aaPredicted RBP17.75■□□□□ 0.43
AC027088.1-201ENST00000557966 CNTN3Q9P232 1028 aa17.75■□□□□ 0.43
AC027088.1-201ENST00000557966 FBXO2Q9UK22 296 aaPredicted RBP17.75■□□□□ 0.43
AC027088.1-201ENST00000557966 MTMR6Q9Y217 621 aa17.75■□□□□ 0.43
AC027088.1-201ENST00000557966 TRIOO75962 3097 aa17.74■□□□□ 0.43
AC027088.1-201ENST00000557966 I3L4J1 428 aa17.74■□□□□ 0.43
AC027088.1-201ENST00000557966 K7ELQ4 463 aaPredicted RBP17.74■□□□□ 0.43
AC027088.1-201ENST00000557966 N4BP1O75113 896 aaKnown RBP17.74■□□□□ 0.43
AC027088.1-201ENST00000557966 B3GAT3O94766 335 aa17.74■□□□□ 0.43
AC027088.1-201ENST00000557966 C1RP00736 705 aa17.74■□□□□ 0.43
AC027088.1-201ENST00000557966 MARCKSP29966 332 aaPredicted RBP17.74■□□□□ 0.43
AC027088.1-201ENST00000557966 BRCC3P46736 316 aa17.74■□□□□ 0.43
AC027088.1-201ENST00000557966 ZNF131P52739 623 aa17.74■□□□□ 0.43
AC027088.1-201ENST00000557966 CREMQ03060 361 aa17.74■□□□□ 0.43
AC027088.1-201ENST00000557966 NOLC1Q14978 699 aaKnown RBP eCLIP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms