RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, human

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPN1-208	ENST00000557702	EXTL3	O43909	919 aa		10.52	□□□□□ -0.73
PABPN1-208	ENST00000557702	MICAL2	O94851	1124 aa		10.52	□□□□□ -0.73
PABPN1-208	ENST00000557702	OR1D2	P34982	312 aa		10.52	□□□□□ -0.73
PABPN1-208	ENST00000557702	SIM1	P81133	766 aa	Predicted RBP	10.52	□□□□□ -0.73
PABPN1-208	ENST00000557702	SET	Q01105	290 aa	Predicted RBP	10.52	□□□□□ -0.73
PABPN1-208	ENST00000557702	SCAP	Q12770	1279 aa		10.52	□□□□□ -0.73
PABPN1-208	ENST00000557702	AP3B2	Q13367	1082 aa		10.52	□□□□□ -0.73
PABPN1-208	ENST00000557702	MTERF2	Q49AM1	385 aa		10.52	□□□□□ -0.73
PABPN1-208	ENST00000557702	FAM171A1	Q5VUB5	890 aa		10.52	□□□□□ -0.73
PABPN1-208	ENST00000557702	SRGAP1	Q7Z6B7	1085 aa		10.52	□□□□□ -0.73
PABPN1-208	ENST00000557702	LURAP1L	Q8IV03	231 aa		10.52	□□□□□ -0.73
PABPN1-208	ENST00000557702	KSR1	Q8IVT5	923 aa		10.52	□□□□□ -0.73
PABPN1-208	ENST00000557702	MFSD6L	Q8IWD5	586 aa		10.52	□□□□□ -0.73
PABPN1-208	ENST00000557702	ZNF654	Q8IZM8	581 aa		10.52	□□□□□ -0.73
PABPN1-208	ENST00000557702	CCDC82	Q8N4S0	544 aa		10.52	□□□□□ -0.73
PABPN1-208	ENST00000557702	IGDCC4	Q8TDY8	1250 aa		10.52	□□□□□ -0.73
PABPN1-208	ENST00000557702	RABGGTA	Q92696	567 aa		10.52	□□□□□ -0.73
PABPN1-208	ENST00000557702	SMARCD2	Q92925	531 aa		10.52	□□□□□ -0.73
PABPN1-208	ENST00000557702	RNF39	Q9H2S5	420 aa		10.52	□□□□□ -0.73
PABPN1-208	ENST00000557702	IFT122	Q9HBG6	1241 aa		10.52	□□□□□ -0.73
PABPN1-208	ENST00000557702	DISC1	Q9NRI5	854 aa		10.52	□□□□□ -0.73
PABPN1-208	ENST00000557702	DIAPH3	Q9NSV4	1193 aa		10.52	□□□□□ -0.73
PABPN1-208	ENST00000557702	SLC8A2	Q9UPR5	921 aa		10.52	□□□□□ -0.73
PABPN1-208	ENST00000557702	GIT1	Q9Y2X7	761 aa		10.52	□□□□□ -0.73
PABPN1-208	ENST00000557702	CELSR3	Q9NYQ7	3312 aa		10.51	□□□□□ -0.73
PABPN1-208	ENST00000557702	WDR27	A2RRH5	827 aa		10.51	□□□□□ -0.73
PABPN1-208	ENST00000557702	MYBPHL	A2RUH7	354 aa		10.51	□□□□□ -0.73
PABPN1-208	ENST00000557702	CCER2	I3L3R5	266 aa		10.51	□□□□□ -0.73
PABPN1-208	ENST00000557702	ARNTL	O00327	626 aa		10.51	□□□□□ -0.73
PABPN1-208	ENST00000557702	NRG2	O14511	850 aa	Predicted RBP	10.51	□□□□□ -0.73
PABPN1-208	ENST00000557702	VIPR2	P41587	438 aa		10.51	□□□□□ -0.73
PABPN1-208	ENST00000557702	NAPA	P54920	295 aa		10.51	□□□□□ -0.73
PABPN1-208	ENST00000557702	SPIRE1	Q08AE8	756 aa		10.51	□□□□□ -0.73
PABPN1-208	ENST00000557702	CCIN	Q13939	588 aa		10.51	□□□□□ -0.73
PABPN1-208	ENST00000557702	HSP90AA2P	Q14568	343 aa	Predicted RBP	10.51	□□□□□ -0.73
PABPN1-208	ENST00000557702	UGCG	Q16739	394 aa		10.51	□□□□□ -0.73
PABPN1-208	ENST00000557702	WDR44	Q5JSH3	913 aa		10.51	□□□□□ -0.73
PABPN1-208	ENST00000557702	PRSS36	Q5K4E3	855 aa		10.51	□□□□□ -0.73
PABPN1-208	ENST00000557702	C20orf194	Q5TEA3	1177 aa		10.51	□□□□□ -0.73
PABPN1-208	ENST00000557702	PDZD4	Q76G19	769 aa	Predicted RBP	10.51	□□□□□ -0.73
PABPN1-208	ENST00000557702	RALGPS2	Q86X27	583 aa	Predicted RBP	10.51	□□□□□ -0.73
PABPN1-208	ENST00000557702	YAF2	Q8IY57	180 aa		10.51	□□□□□ -0.73
PABPN1-208	ENST00000557702	HACE1	Q8IYU2	909 aa		10.51	□□□□□ -0.73
PABPN1-208	ENST00000557702	CHCHD4	Q8N4Q1	142 aa		10.51	□□□□□ -0.73
PABPN1-208	ENST00000557702	NCOA7	Q8NI08	942 aa		10.51	□□□□□ -0.73
PABPN1-208	ENST00000557702	TCEAL4	Q96EI5	215 aa		10.51	□□□□□ -0.73
PABPN1-208	ENST00000557702	CORO1B	Q9BR76	489 aa		10.51	□□□□□ -0.73
PABPN1-208	ENST00000557702	NIFK	Q9BYG3	293 aa	Known RBP	10.51	□□□□□ -0.73
PABPN1-208	ENST00000557702	CCDC86	Q9H6F5	360 aa	Known RBP	10.51	□□□□□ -0.73
PABPN1-208	ENST00000557702	SEPT9	Q9UHD8	586 aa	Predicted RBP	10.51	□□□□□ -0.73
PABPN1-208	ENST00000557702	HES2	Q9Y543	173 aa		10.51	□□□□□ -0.73
PABPN1-208	ENST00000557702		U3KPZ7	1027 aa	Predicted RBP	10.51	□□□□□ -0.73
PABPN1-208	ENST00000557702	APC2	O95996	2303 aa		10.51	□□□□□ -0.73
PABPN1-208	ENST00000557702	TICRR	Q7Z2Z1	1910 aa		10.5	□□□□□ -0.73
PABPN1-208	ENST00000557702	SPAAR	A0A1B0GVQ0	90 aa		10.5	□□□□□ -0.73
PABPN1-208	ENST00000557702	SLC38A8	A6NNN8	435 aa		10.5	□□□□□ -0.73
PABPN1-208	ENST00000557702	SPECC1L-ADORA2A	F8WAN1	911 aa		10.5	□□□□□ -0.73
PABPN1-208	ENST00000557702	HIP1	O00291	1037 aa		10.5	□□□□□ -0.73
PABPN1-208	ENST00000557702	ATG13	O75143	517 aa		10.5	□□□□□ -0.73
PABPN1-208	ENST00000557702	LRG1	P02750	347 aa		10.5	□□□□□ -0.73
PABPN1-208	ENST00000557702	CYP3A4	P08684	503 aa		10.5	□□□□□ -0.73
PABPN1-208	ENST00000557702	CTH	P32929	405 aa		10.5	□□□□□ -0.73
PABPN1-208	ENST00000557702	SOX9	P48436	509 aa		10.5	□□□□□ -0.73
PABPN1-208	ENST00000557702	ADCY7	P51828	1080 aa		10.5	□□□□□ -0.73
PABPN1-208	ENST00000557702	KARS	Q15046	597 aa	Known RBP	10.5	□□□□□ -0.73
PABPN1-208	ENST00000557702	PON2	Q15165	354 aa		10.5	□□□□□ -0.73
PABPN1-208	ENST00000557702	CYP4A22	Q5TCH4	519 aa		10.5	□□□□□ -0.73
PABPN1-208	ENST00000557702	TXNDC11	Q6PKC3	985 aa		10.5	□□□□□ -0.73
PABPN1-208	ENST00000557702	CAMKK1	Q8N5S9	505 aa		10.5	□□□□□ -0.73
PABPN1-208	ENST00000557702	HASPIN	Q8TF76	798 aa		10.5	□□□□□ -0.73
PABPN1-208	ENST00000557702	E2F7	Q96AV8	911 aa		10.5	□□□□□ -0.73
PABPN1-208	ENST00000557702	CEP89	Q96ST8	783 aa		10.5	□□□□□ -0.73
PABPN1-208	ENST00000557702	JPH2	Q9BR39	696 aa	Predicted RBP	10.5	□□□□□ -0.73
PABPN1-208	ENST00000557702	EIF2A	Q9BY44	585 aa	Known RBP	10.5	□□□□□ -0.73
PABPN1-208	ENST00000557702	GLT8D2	Q9H1C3	349 aa		10.5	□□□□□ -0.73
PABPN1-208	ENST00000557702	TRPV4	Q9HBA0	871 aa		10.5	□□□□□ -0.73
PABPN1-208	ENST00000557702	SCUBE2	Q9NQ36	999 aa		10.5	□□□□□ -0.73
PABPN1-208	ENST00000557702	WDR81	Q562E7	1941 aa		10.5	□□□□□ -0.73
PABPN1-208	ENST00000557702	SMCO2	A6NFE2	343 aa		10.49	□□□□□ -0.73
PABPN1-208	ENST00000557702	HEPACAM2	A8MVW5	462 aa		10.49	□□□□□ -0.73
PABPN1-208	ENST00000557702	TK2	O00142	265 aa		10.49	□□□□□ -0.73
PABPN1-208	ENST00000557702	CHAD	O15335	359 aa		10.49	□□□□□ -0.73
PABPN1-208	ENST00000557702	MAF	O75444	373 aa	Predicted RBP	10.49	□□□□□ -0.73
PABPN1-208	ENST00000557702	ERLIN2	O94905	339 aa		10.49	□□□□□ -0.73
PABPN1-208	ENST00000557702	PRB1	P04280	392 aa		10.49	□□□□□ -0.73
PABPN1-208	ENST00000557702	SRGAP2C	P0DJJ0	459 aa		10.49	□□□□□ -0.73
PABPN1-208	ENST00000557702	PLA2G2A	P14555	144 aa		10.49	□□□□□ -0.73
PABPN1-208	ENST00000557702	AXL	P30530	894 aa		10.49	□□□□□ -0.73
PABPN1-208	ENST00000557702	ELF1	P32519	619 aa		10.49	□□□□□ -0.73
PABPN1-208	ENST00000557702	IRX4	P78413	519 aa		10.49	□□□□□ -0.73
PABPN1-208	ENST00000557702	HNRNPU	Q00839	825 aa	Known RBP eCLIP	10.49	□□□□□ -0.73
PABPN1-208	ENST00000557702	NCBP1	Q09161	790 aa	Known RBP	10.49	□□□□□ -0.73
PABPN1-208	ENST00000557702	ELAVL2	Q12926	359 aa	Known RBP	10.49	□□□□□ -0.73
PABPN1-208	ENST00000557702	GRIK3	Q13003	919 aa		10.49	□□□□□ -0.73
PABPN1-208	ENST00000557702	PRR16	Q569H4	304 aa		10.49	□□□□□ -0.73
PABPN1-208	ENST00000557702	XKR3	Q5GH77	459 aa		10.49	□□□□□ -0.73
PABPN1-208	ENST00000557702	LARP1B	Q659C4	914 aa	Known RBP	10.49	□□□□□ -0.73
PABPN1-208	ENST00000557702	WWC2	Q6AWC2	1192 aa		10.49	□□□□□ -0.73
PABPN1-208	ENST00000557702	PPP1R18	Q6NYC8	613 aa		10.49	□□□□□ -0.73
PABPN1-208	ENST00000557702	NOTUM	Q6P988	496 aa		10.49	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms