RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 PPP6R2O75170 966 aa18.32■□□□□ 0.52
NEK9-211ENST00000557673 SRFP11831 508 aa18.32■□□□□ 0.52
NEK9-211ENST00000557673 MLH1P40692 756 aa18.32■□□□□ 0.52
NEK9-211ENST00000557673 KRT85P78386 507 aa18.32■□□□□ 0.52
NEK9-211ENST00000557673 ECM1Q16610 540 aa18.32■□□□□ 0.52
NEK9-211ENST00000557673 HYIQ5T013 277 aa18.32■□□□□ 0.52
NEK9-211ENST00000557673 RNF168Q8IYW5 571 aaPredicted RBP18.32■□□□□ 0.52
NEK9-211ENST00000557673 SLC44A3Q8N4M1 653 aa18.32■□□□□ 0.52
NEK9-211ENST00000557673 CHST7Q9NS84 486 aa18.32■□□□□ 0.52
NEK9-211ENST00000557673 ZDHHC7Q9NXF8 308 aa18.32■□□□□ 0.52
NEK9-211ENST00000557673 CFAP45Q9UL16 551 aa18.32■□□□□ 0.52
NEK9-211ENST00000557673 INO80B-WBP1J3KQ70 363 aa18.31■□□□□ 0.52
NEK9-211ENST00000557673 SLC26A4O43511 780 aa18.31■□□□□ 0.52
NEK9-211ENST00000557673 N4BP1O75113 896 aaKnown RBP18.31■□□□□ 0.52
NEK9-211ENST00000557673 PAPLNO95428 1278 aa18.31■□□□□ 0.52
NEK9-211ENST00000557673 EFEMP2O95967 443 aa18.31■□□□□ 0.52
NEK9-211ENST00000557673 CFHP08603 1231 aa18.31■□□□□ 0.52
NEK9-211ENST00000557673 ID4P47928 161 aa18.31■□□□□ 0.52
NEK9-211ENST00000557673 MBTD1Q05BQ5 628 aa18.31■□□□□ 0.52
NEK9-211ENST00000557673 USP41Q3LFD5 358 aa18.31■□□□□ 0.52
NEK9-211ENST00000557673 IFNLR1Q8IU57 520 aaPredicted RBP18.31■□□□□ 0.52
NEK9-211ENST00000557673 CLIC6Q96NY7 704 aa18.31■□□□□ 0.52
NEK9-211ENST00000557673 IPO9Q96P70 1041 aaKnown RBP18.31■□□□□ 0.52
NEK9-211ENST00000557673 EIF2AQ9BY44 585 aaKnown RBP18.31■□□□□ 0.52
NEK9-211ENST00000557673 FNIP2Q9P278 1114 aa18.31■□□□□ 0.52
NEK9-211ENST00000557673 VPS13AQ96RL7 3174 aa18.31■□□□□ 0.52
NEK9-211ENST00000557673 ARHGEF35A5YM69 484 aa18.3■□□□□ 0.52
NEK9-211ENST00000557673 NARSO43776 548 aaKnown RBP18.3■□□□□ 0.52
NEK9-211ENST00000557673 RFPL2O75678 378 aa18.3■□□□□ 0.52
NEK9-211ENST00000557673 SCNN1GP51170 649 aa18.3■□□□□ 0.52
NEK9-211ENST00000557673 TMEM119Q4V9L6 283 aa18.3■□□□□ 0.52
NEK9-211ENST00000557673 PADI6Q6TGC4 694 aa18.3■□□□□ 0.52
NEK9-211ENST00000557673 PALB2Q86YC2 1186 aa18.3■□□□□ 0.52
NEK9-211ENST00000557673 MCPH1Q8NEM0 835 aa18.3■□□□□ 0.52
NEK9-211ENST00000557673 RSAD2Q8WXG1 361 aa18.3■□□□□ 0.52
NEK9-211ENST00000557673 CPB2Q96IY4 423 aa18.3■□□□□ 0.52
NEK9-211ENST00000557673 PNMA5Q96PV4 448 aa18.3■□□□□ 0.52
NEK9-211ENST00000557673 NFKBIZQ9BYH8 718 aa18.3■□□□□ 0.52
NEK9-211ENST00000557673 NT5C3AQ9H0P0 336 aa18.3■□□□□ 0.52
NEK9-211ENST00000557673 RNF39Q9H2S5 420 aa18.3■□□□□ 0.52
NEK9-211ENST00000557673 DDX19AQ9NUU7 478 aaKnown RBP18.3■□□□□ 0.52
NEK9-211ENST00000557673 ZFP37Q9Y6Q3 630 aaPredicted RBP18.3■□□□□ 0.52
NEK9-211ENST00000557673 MYH11P35749 1972 aa18.3■□□□□ 0.52
NEK9-211ENST00000557673 ZMYM2Q9UBW7 1377 aa18.3■□□□□ 0.52
NEK9-211ENST00000557673 GVINP1Q7Z2Y8 2422 aa18.29■□□□□ 0.52
NEK9-211ENST00000557673 LRRIQ4A6NIV6 560 aa18.29■□□□□ 0.52
NEK9-211ENST00000557673 TGM5O43548 720 aa18.29■□□□□ 0.52
NEK9-211ENST00000557673 LAMP2P13473 410 aa18.29■□□□□ 0.52
NEK9-211ENST00000557673 UBA7P41226 1012 aa18.29■□□□□ 0.52
NEK9-211ENST00000557673 PHLDB3Q6NSJ2 640 aa18.29■□□□□ 0.52
NEK9-211ENST00000557673 LEO1Q8WVC0 666 aaPredicted RBP18.29■□□□□ 0.52
NEK9-211ENST00000557673 ZNF707Q96C28 371 aaPredicted RBP18.29■□□□□ 0.52
NEK9-211ENST00000557673 ZFP42Q96MM3 310 aa18.29■□□□□ 0.52
NEK9-211ENST00000557673 MYADMQ96S97 322 aa18.29■□□□□ 0.52
NEK9-211ENST00000557673 APOL6Q9BWW8 343 aa18.29■□□□□ 0.52
NEK9-211ENST00000557673 PRKD2Q9BZL6 878 aa18.29■□□□□ 0.52
NEK9-211ENST00000557673 CHMP5Q9NZZ3 219 aa18.29■□□□□ 0.52
NEK9-211ENST00000557673 RCOR1Q9UKL0 485 aa18.29■□□□□ 0.52
NEK9-211ENST00000557673 ADAM28Q9UKQ2 775 aa18.29■□□□□ 0.52
NEK9-211ENST00000557673 KIAA1024Q9UPX6 916 aa18.29■□□□□ 0.52
NEK9-211ENST00000557673 HES2Q9Y543 173 aa18.29■□□□□ 0.52
NEK9-211ENST00000557673 C2orf16Q68DN1 1984 aa18.28■□□□□ 0.52
NEK9-211ENST00000557673 KRBA1A5PL33 1030 aa18.28■□□□□ 0.52
NEK9-211ENST00000557673 B4GALT5O43286 388 aa18.28■□□□□ 0.52
NEK9-211ENST00000557673 CUTAO60888 179 aa18.28■□□□□ 0.52
NEK9-211ENST00000557673 LMNAP02545 664 aaKnown RBP18.28■□□□□ 0.52
NEK9-211ENST00000557673 SPATA31D3P0C874 917 aa18.28■□□□□ 0.52
NEK9-211ENST00000557673 GRIK3Q13003 919 aa18.28■□□□□ 0.52
NEK9-211ENST00000557673 AMHR2Q16671 573 aa18.28■□□□□ 0.52
NEK9-211ENST00000557673 SPECC1Q5M775 1068 aa18.28■□□□□ 0.52
NEK9-211ENST00000557673 AXDND1Q5T1B0 1012 aaPredicted RBP18.28■□□□□ 0.52
NEK9-211ENST00000557673 FUT10Q6P4F1 479 aa18.28■□□□□ 0.52
NEK9-211ENST00000557673 SLC27A1Q6PCB7 646 aa18.28■□□□□ 0.52
NEK9-211ENST00000557673 ZC3H14Q6PJT7 736 aaKnown RBP18.28■□□□□ 0.52
NEK9-211ENST00000557673 SPATA31D4Q6ZUB0 917 aa18.28■□□□□ 0.52
NEK9-211ENST00000557673 USP49Q70CQ1 688 aa18.28■□□□□ 0.52
NEK9-211ENST00000557673 KCNK18Q7Z418 384 aa18.28■□□□□ 0.52
NEK9-211ENST00000557673 BSNDQ8WZ55 320 aa18.28■□□□□ 0.52
NEK9-211ENST00000557673 EPSTI1Q96J88 318 aa18.28■□□□□ 0.52
NEK9-211ENST00000557673 CDK5RAP3Q96JB5 506 aa18.28■□□□□ 0.52
NEK9-211ENST00000557673 SPATA32Q96LK8 384 aa18.28■□□□□ 0.52
NEK9-211ENST00000557673 CCSER1Q9C0I3 900 aa18.28■□□□□ 0.52
NEK9-211ENST00000557673 BHMT2Q9H2M3 363 aa18.28■□□□□ 0.52
NEK9-211ENST00000557673 TBC1D17Q9HA65 648 aa18.28■□□□□ 0.52
NEK9-211ENST00000557673 MIOSQ9NXC5 875 aa18.28■□□□□ 0.52
NEK9-211ENST00000557673 CA14Q9ULX7 337 aa18.28■□□□□ 0.52
NEK9-211ENST00000557673 TADA2AO75478 443 aa18.27■□□□□ 0.52
NEK9-211ENST00000557673 MYBP10242 640 aa18.27■□□□□ 0.52
NEK9-211ENST00000557673 ARF4P18085 180 aaPredicted RBP18.27■□□□□ 0.52
NEK9-211ENST00000557673 CYP11B2P19099 503 aa18.27■□□□□ 0.52
NEK9-211ENST00000557673 ME1P48163 572 aa18.27■□□□□ 0.52
NEK9-211ENST00000557673 KARSQ15046 597 aaKnown RBP18.27■□□□□ 0.52
NEK9-211ENST00000557673 ZRSR1Q15695 479 aaKnown RBP18.27■□□□□ 0.52
NEK9-211ENST00000557673 LILRA6Q6PI73 481 aa18.27■□□□□ 0.52
NEK9-211ENST00000557673 KCTD17Q8N5Z5 321 aa18.27■□□□□ 0.52
NEK9-211ENST00000557673 LRRC15Q8TF66 581 aa18.27■□□□□ 0.52
NEK9-211ENST00000557673 RIN2Q8WYP3 895 aaPredicted RBP18.27■□□□□ 0.52
NEK9-211ENST00000557673 CALML4Q96GE6 196 aa18.27■□□□□ 0.52
NEK9-211ENST00000557673 SHDQ96IW2 340 aa18.27■□□□□ 0.52
NEK9-211ENST00000557673 GPR62Q9BZJ7 368 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms