RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 CCDC113Q9H0I3 377 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 NXF3Q9H4D5 531 aaKnown RBP9.12□□□□□ -0.95
PSEN1-223ENST00000557511 CWH43Q9H720 699 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 MRPL44Q9H9J2 332 aaKnown RBP9.12□□□□□ -0.95
PSEN1-223ENST00000557511 ENTPD7Q9NQZ7 604 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 TLR9Q9NR96 1032 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 PANK4Q9NVE7 773 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 TBC1D13Q9NVG8 400 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 ANKFY1Q9P2R3 1169 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 USP25Q9UHP3 1055 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 KCNH3Q9ULD8 1083 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 COG5Q9UP83 839 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 PLAGL2Q9UPG8 496 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 LZTS1Q9Y250 596 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 FAN1Q9Y2M0 1017 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 GDAQ9Y2T3 454 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 HES2Q9Y543 173 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 TTC3P53804 2025 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 ZMYM2Q9UBW7 1377 aa9.12□□□□□ -0.95
PSEN1-223ENST00000557511 ARL5CA6NH57 179 aa9.11□□□□□ -0.95
PSEN1-223ENST00000557511 RBAK-RBAKDNI3L0D1 243 aa9.11□□□□□ -0.95
PSEN1-223ENST00000557511 GRM6O15303 877 aa9.11□□□□□ -0.95
PSEN1-223ENST00000557511 GCNT3O95395 438 aa9.11□□□□□ -0.95
PSEN1-223ENST00000557511 ITGB1P05556 798 aa9.11□□□□□ -0.95
PSEN1-223ENST00000557511 THP07101 528 aa9.11□□□□□ -0.95
PSEN1-223ENST00000557511 SCNN1GP51170 649 aa9.11□□□□□ -0.95
PSEN1-223ENST00000557511 ZNF131P52739 623 aa9.11□□□□□ -0.95
PSEN1-223ENST00000557511 PLCB3Q01970 1234 aa9.11□□□□□ -0.95
PSEN1-223ENST00000557511 NOLC1Q14978 699 aaKnown RBP eCLIP9.11□□□□□ -0.95
PSEN1-223ENST00000557511 NT5DC1Q5TFE4 455 aa9.11□□□□□ -0.95
PSEN1-223ENST00000557511 RESP18Q5W5W9 173 aa9.11□□□□□ -0.95
PSEN1-223ENST00000557511 SLFN12LQ6IEE8 588 aa9.11□□□□□ -0.95
PSEN1-223ENST00000557511 SHC4Q6S5L8 630 aa9.11□□□□□ -0.95
PSEN1-223ENST00000557511 SYCP3Q8IZU3 236 aa9.11□□□□□ -0.95
PSEN1-223ENST00000557511 SPPL3Q8TCT6 385 aa9.11□□□□□ -0.95
PSEN1-223ENST00000557511 HLA-CQ95604 372 aa9.11□□□□□ -0.95
PSEN1-223ENST00000557511 HVCN1Q96D96 273 aa9.11□□□□□ -0.95
PSEN1-223ENST00000557511 ACAP3Q96P50 834 aa9.11□□□□□ -0.95
PSEN1-223ENST00000557511 ACCSQ96QU6 501 aa9.11□□□□□ -0.95
PSEN1-223ENST00000557511 NGRNQ9NPE2 291 aaKnown RBP9.11□□□□□ -0.95
PSEN1-223ENST00000557511 RNF19AQ9NV58 838 aa9.11□□□□□ -0.95
PSEN1-223ENST00000557511 SNTG2Q9NY99 539 aa9.11□□□□□ -0.95
PSEN1-223ENST00000557511 KLK14Q9P0G3 267 aa9.11□□□□□ -0.95
PSEN1-223ENST00000557511 THEGQ9P2T0 379 aa9.11□□□□□ -0.95
PSEN1-223ENST00000557511 TBX20Q9UMR3 447 aa9.11□□□□□ -0.95
PSEN1-223ENST00000557511 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.11□□□□□ -0.95
PSEN1-223ENST00000557511 GBF1Q92538 1859 aa9.11□□□□□ -0.95
PSEN1-223ENST00000557511 MYMKA6NI61 221 aa9.1□□□□□ -0.95
PSEN1-223ENST00000557511 NT5C1B-RDH14C9J2C7 533 aa9.1□□□□□ -0.95
PSEN1-223ENST00000557511 XPOTO43592 962 aaKnown RBP9.1□□□□□ -0.95
PSEN1-223ENST00000557511 TADA2AO75478 443 aa9.1□□□□□ -0.95
PSEN1-223ENST00000557511 RECQL4O94761 1208 aa9.1□□□□□ -0.95
PSEN1-223ENST00000557511 ADH1BP00325 375 aa9.1□□□□□ -0.95
PSEN1-223ENST00000557511 GALTP07902 379 aa9.1□□□□□ -0.95
PSEN1-223ENST00000557511 CMA1P23946 247 aa9.1□□□□□ -0.95
PSEN1-223ENST00000557511 GRM5P41594 1212 aa9.1□□□□□ -0.95
PSEN1-223ENST00000557511 SYKP43405 635 aa9.1□□□□□ -0.95
PSEN1-223ENST00000557511 OSTNP61366 133 aa9.1□□□□□ -0.95
PSEN1-223ENST00000557511 HSP90AA2PQ14568 343 aaPredicted RBP9.1□□□□□ -0.95
PSEN1-223ENST00000557511 SMC1AQ14683 1233 aaKnown RBP9.1□□□□□ -0.95
PSEN1-223ENST00000557511 POSTNQ15063 836 aa9.1□□□□□ -0.95
PSEN1-223ENST00000557511 AXDND1Q5T1B0 1012 aaPredicted RBP9.1□□□□□ -0.95
PSEN1-223ENST00000557511 EEF1DP3Q658K8 133 aa9.1□□□□□ -0.95
PSEN1-223ENST00000557511 KIAA1841Q6NSI8 718 aa9.1□□□□□ -0.95
PSEN1-223ENST00000557511 LRRC55Q6ZSA7 311 aa9.1□□□□□ -0.95
PSEN1-223ENST00000557511 SFR1Q86XK3 245 aa9.1□□□□□ -0.95
PSEN1-223ENST00000557511 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.1□□□□□ -0.95
PSEN1-223ENST00000557511 SLC39A11Q8N1S5 342 aa9.1□□□□□ -0.95
PSEN1-223ENST00000557511 CDT1Q9H211 546 aa9.1□□□□□ -0.95
PSEN1-223ENST00000557511 IGFLR1Q9H665 355 aa9.1□□□□□ -0.95
PSEN1-223ENST00000557511 NRDE2Q9H7Z3 1164 aa9.1□□□□□ -0.95
PSEN1-223ENST00000557511 TMEM206Q9H813 350 aa9.1□□□□□ -0.95
PSEN1-223ENST00000557511 SLC38A7Q9NVC3 462 aa9.1□□□□□ -0.95
PSEN1-223ENST00000557511 FAM50BQ9Y247 325 aa9.1□□□□□ -0.95
PSEN1-223ENST00000557511 SSX2IPQ9Y2D8 614 aa9.1□□□□□ -0.95
PSEN1-223ENST00000557511 USP20Q9Y2K6 914 aa9.1□□□□□ -0.95
PSEN1-223ENST00000557511 ZDHHC9Q9Y397 364 aa9.1□□□□□ -0.95
PSEN1-223ENST00000557511 A0A1W2PQ27 194 aa9.09□□□□□ -0.95
PSEN1-223ENST00000557511 A0A1W2PQ64 194 aa9.09□□□□□ -0.95
PSEN1-223ENST00000557511 A0A1W2PQD8 194 aa9.09□□□□□ -0.95
PSEN1-223ENST00000557511 MEIS3P2A8K0S8 358 aa9.09□□□□□ -0.95
PSEN1-223ENST00000557511 NRP1O14786 923 aa9.09□□□□□ -0.95
PSEN1-223ENST00000557511 INPPL1O15357 1258 aa9.09□□□□□ -0.95
PSEN1-223ENST00000557511 SLFN14P0C7P3 912 aa9.09□□□□□ -0.95
PSEN1-223ENST00000557511 PFKFB1P16118 471 aa9.09□□□□□ -0.95
PSEN1-223ENST00000557511 NMT1P30419 496 aaKnown RBP9.09□□□□□ -0.95
PSEN1-223ENST00000557511 PBX3P40426 434 aa9.09□□□□□ -0.95
PSEN1-223ENST00000557511 AFMP43652 599 aa9.09□□□□□ -0.95
PSEN1-223ENST00000557511 SLC11A1P49279 550 aa9.09□□□□□ -0.95
PSEN1-223ENST00000557511 MRPS5P82675 430 aaKnown RBP9.09□□□□□ -0.95
PSEN1-223ENST00000557511 GTF2BQ00403 316 aa9.09□□□□□ -0.95
PSEN1-223ENST00000557511 ELAVL2Q12926 359 aaKnown RBP9.09□□□□□ -0.95
PSEN1-223ENST00000557511 TUSC3Q13454 348 aa9.09□□□□□ -0.95
PSEN1-223ENST00000557511 TCEAL5Q5H9L2 206 aa9.09□□□□□ -0.95
PSEN1-223ENST00000557511 PLPP4Q5VZY2 271 aa9.09□□□□□ -0.95
PSEN1-223ENST00000557511 KANK3Q6NY19 840 aa9.09□□□□□ -0.95
PSEN1-223ENST00000557511 ELMSAN1Q6PJG2 1045 aa9.09□□□□□ -0.95
PSEN1-223ENST00000557511 ZNF720Q7Z2F6 126 aa9.09□□□□□ -0.95
PSEN1-223ENST00000557511 DDX53Q86TM3 631 aaKnown RBP9.09□□□□□ -0.95
PSEN1-223ENST00000557511 MAP4K3Q8IVH8 894 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms