RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 PTPN4P29074 926 aa11.17□□□□□ -0.62
SUPT16H-207ENST00000557394 CHRNA3P32297 505 aa11.17□□□□□ -0.62
SUPT16H-207ENST00000557394 FOXN2P32314 431 aa11.17□□□□□ -0.62
SUPT16H-207ENST00000557394 STX2P32856 288 aa11.17□□□□□ -0.62
SUPT16H-207ENST00000557394 TSPAN7P41732 249 aa11.17□□□□□ -0.62
SUPT16H-207ENST00000557394 GRB10Q13322 594 aa11.17□□□□□ -0.62
SUPT16H-207ENST00000557394 RRP1BQ14684 758 aaKnown RBP11.17□□□□□ -0.62
SUPT16H-207ENST00000557394 PUM3Q15397 648 aaKnown RBP11.17□□□□□ -0.62
SUPT16H-207ENST00000557394 MAPRE1Q15691 268 aaKnown RBP11.17□□□□□ -0.62
SUPT16H-207ENST00000557394 SYCP2LQ5T4T6 812 aa11.17□□□□□ -0.62
SUPT16H-207ENST00000557394 ARHGEF18Q6ZSZ5 1173 aa11.17□□□□□ -0.62
SUPT16H-207ENST00000557394 PTF1AQ7RTS3 328 aa11.17□□□□□ -0.62
SUPT16H-207ENST00000557394 DNAAF5Q86Y56 855 aa11.17□□□□□ -0.62
SUPT16H-207ENST00000557394 GDAP1Q8TB36 358 aa11.17□□□□□ -0.62
SUPT16H-207ENST00000557394 LRRC37BQ96QE4 947 aa11.17□□□□□ -0.62
SUPT16H-207ENST00000557394 PITPNM3Q9BZ71 974 aa11.17□□□□□ -0.62
SUPT16H-207ENST00000557394 CNNM1Q9NRU3 951 aa11.17□□□□□ -0.62
SUPT16H-207ENST00000557394 LARSQ9P2J5 1176 aaKnown RBP11.17□□□□□ -0.62
SUPT16H-207ENST00000557394 CIDEBQ9UHD4 219 aa11.17□□□□□ -0.62
SUPT16H-207ENST00000557394 RTCBQ9Y3I0 505 aaKnown RBP11.17□□□□□ -0.62
SUPT16H-207ENST00000557394 LRP5O75197 1615 aa11.17□□□□□ -0.62
SUPT16H-207ENST00000557394 HGSO14964 777 aaPredicted RBP11.17□□□□□ -0.62
SUPT16H-207ENST00000557394 HNRNPCL1O60812 293 aaKnown RBP11.17□□□□□ -0.62
SUPT16H-207ENST00000557394 TCEA3O75764 348 aa11.17□□□□□ -0.62
SUPT16H-207ENST00000557394 CYP19A1P11511 503 aaPredicted RBP11.17□□□□□ -0.62
SUPT16H-207ENST00000557394 HSPA6P17066 643 aa11.17□□□□□ -0.62
SUPT16H-207ENST00000557394 AP1B1Q10567 949 aa11.17□□□□□ -0.62
SUPT16H-207ENST00000557394 STRN3Q13033 797 aa11.17□□□□□ -0.62
SUPT16H-207ENST00000557394 UBE4AQ14139 1066 aa11.17□□□□□ -0.62
SUPT16H-207ENST00000557394 ZC2HC1CQ53FD0 456 aaPredicted RBP11.17□□□□□ -0.62
SUPT16H-207ENST00000557394 LRRC74BQ6ZQY2 392 aa11.17□□□□□ -0.62
SUPT16H-207ENST00000557394 ZC3H18Q86VM9 953 aaKnown RBP11.17□□□□□ -0.62
SUPT16H-207ENST00000557394 SNX32Q86XE0 403 aa11.17□□□□□ -0.62
SUPT16H-207ENST00000557394 TBC1D20Q96BZ9 403 aa11.17□□□□□ -0.62
SUPT16H-207ENST00000557394 CALML4Q96GE6 196 aa11.17□□□□□ -0.62
SUPT16H-207ENST00000557394 FAM89AQ96GI7 184 aa11.17□□□□□ -0.62
SUPT16H-207ENST00000557394 PPP1R12CQ9BZL4 782 aa11.17□□□□□ -0.62
SUPT16H-207ENST00000557394 GREM2Q9H772 168 aa11.17□□□□□ -0.62
SUPT16H-207ENST00000557394 LZTS1Q9Y250 596 aa11.17□□□□□ -0.62
SUPT16H-207ENST00000557394 ADGRA3Q8IWK6 1321 aa11.16□□□□□ -0.62
SUPT16H-207ENST00000557394 TRAF5O00463 557 aa11.16□□□□□ -0.62
SUPT16H-207ENST00000557394 E2F6O75461 281 aa11.16□□□□□ -0.62
SUPT16H-207ENST00000557394 TTLL1O95922 423 aa11.16□□□□□ -0.62
SUPT16H-207ENST00000557394 BRAFP15056 766 aa11.16□□□□□ -0.62
SUPT16H-207ENST00000557394 HOXC13P31276 330 aa11.16□□□□□ -0.62
SUPT16H-207ENST00000557394 DEUP1Q05D60 604 aa11.16□□□□□ -0.62
SUPT16H-207ENST00000557394 POU5F1BQ06416 359 aa11.16□□□□□ -0.62
SUPT16H-207ENST00000557394 SLC34A1Q06495 639 aa11.16□□□□□ -0.62
SUPT16H-207ENST00000557394 RGS9BPQ6ZS82 235 aa11.16□□□□□ -0.62
SUPT16H-207ENST00000557394 CYFIP1Q7L576 1253 aa11.16□□□□□ -0.62
SUPT16H-207ENST00000557394 GLIS3Q8NEA6 775 aa11.16□□□□□ -0.62
SUPT16H-207ENST00000557394 OLIG1Q8TAK6 271 aa11.16□□□□□ -0.62
SUPT16H-207ENST00000557394 MLXIPLQ9NP71 852 aa11.16□□□□□ -0.62
SUPT16H-207ENST00000557394 KCNK9Q9NPC2 374 aa11.16□□□□□ -0.62
SUPT16H-207ENST00000557394 LGALS13Q9UHV8 139 aa11.16□□□□□ -0.62
SUPT16H-207ENST00000557394 PPP1R9AQ9ULJ8 1098 aa11.16□□□□□ -0.62
SUPT16H-207ENST00000557394 ACTL7BQ9Y614 415 aa11.16□□□□□ -0.62
SUPT16H-207ENST00000557394 TAF1LQ8IZX4 1826 aa11.16□□□□□ -0.62
SUPT16H-207ENST00000557394 CASZ1Q86V15 1759 aa11.16□□□□□ -0.62
SUPT16H-207ENST00000557394 DDX3XO00571 662 aaKnown RBP eCLIP11.15□□□□□ -0.62
SUPT16H-207ENST00000557394 CETN3O15182 167 aa11.15□□□□□ -0.62
SUPT16H-207ENST00000557394 GFPT2O94808 682 aa11.15□□□□□ -0.62
SUPT16H-207ENST00000557394 LYNP07948 512 aa11.15□□□□□ -0.62
SUPT16H-207ENST00000557394 CCDC166P0CW27 439 aa11.15□□□□□ -0.62
SUPT16H-207ENST00000557394 CTNNA2P26232 953 aa11.15□□□□□ -0.62
SUPT16H-207ENST00000557394 CCDC6Q16204 474 aa11.15□□□□□ -0.62
SUPT16H-207ENST00000557394 RASIP1Q5U651 963 aa11.15□□□□□ -0.62
SUPT16H-207ENST00000557394 PPP1R21Q6ZMI0 780 aa11.15□□□□□ -0.62
SUPT16H-207ENST00000557394 KIAA0825Q8IV33 1275 aa11.15□□□□□ -0.62
SUPT16H-207ENST00000557394 PRELID2Q8N945 189 aa11.15□□□□□ -0.62
SUPT16H-207ENST00000557394 MIGA1Q8NAN2 632 aa11.15□□□□□ -0.62
SUPT16H-207ENST00000557394 SDR42E1Q8WUS8 393 aa11.15□□□□□ -0.62
SUPT16H-207ENST00000557394 LARP4BQ92615 738 aaKnown RBP11.15□□□□□ -0.62
SUPT16H-207ENST00000557394 GPKOWQ92917 476 aaPredicted RBP eCLIP11.15□□□□□ -0.62
SUPT16H-207ENST00000557394 C18orf8Q96DM3 657 aa11.15□□□□□ -0.62
SUPT16H-207ENST00000557394 PNMA5Q96PV4 448 aa11.15□□□□□ -0.62
SUPT16H-207ENST00000557394 NT5C3AQ9H0P0 336 aa11.15□□□□□ -0.62
SUPT16H-207ENST00000557394 CDC42EP4Q9H3Q1 356 aaKnown RBP11.15□□□□□ -0.62
SUPT16H-207ENST00000557394 SAR1AQ9NR31 198 aa11.15□□□□□ -0.62
SUPT16H-207ENST00000557394 IL1RAPL1Q9NZN1 696 aa11.15□□□□□ -0.62
SUPT16H-207ENST00000557394 STX18Q9P2W9 335 aaKnown RBP11.15□□□□□ -0.62
SUPT16H-207ENST00000557394 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.15□□□□□ -0.62
SUPT16H-207ENST00000557394 COL1A1P02452 1464 aaPredicted RBP11.15□□□□□ -0.62
SUPT16H-207ENST00000557394 PALM3A6NDB9 673 aaPredicted RBP11.15□□□□□ -0.62
SUPT16H-207ENST00000557394 ATP6V1G1O75348 118 aa11.15□□□□□ -0.62
SUPT16H-207ENST00000557394 UCHL3P15374 230 aa11.15□□□□□ -0.62
SUPT16H-207ENST00000557394 DESP17661 470 aa11.15□□□□□ -0.62
SUPT16H-207ENST00000557394 RCN1Q15293 331 aa11.15□□□□□ -0.62
SUPT16H-207ENST00000557394 LRRC41Q15345 812 aa11.15□□□□□ -0.62
SUPT16H-207ENST00000557394 LIN52Q52LA3 116 aa11.15□□□□□ -0.62
SUPT16H-207ENST00000557394 DYMQ7RTS9 669 aa11.15□□□□□ -0.62
SUPT16H-207ENST00000557394 APPL2Q8NEU8 664 aa11.15□□□□□ -0.62
SUPT16H-207ENST00000557394 RFFLQ8WZ73 363 aa11.15□□□□□ -0.62
SUPT16H-207ENST00000557394 MIPEPQ99797 713 aa11.15□□□□□ -0.62
SUPT16H-207ENST00000557394 PHACTR1Q9C0D0 580 aa11.15□□□□□ -0.62
SUPT16H-207ENST00000557394 MIS12Q9H081 205 aa11.15□□□□□ -0.62
SUPT16H-207ENST00000557394 STK32BQ9NY57 414 aa11.15□□□□□ -0.62
SUPT16H-207ENST00000557394 ZNF212Q9UDV6 495 aa11.15□□□□□ -0.62
SUPT16H-207ENST00000557394 C19orf81C9J6K1 198 aa11.14□□□□□ -0.63
SUPT16H-207ENST00000557394 SGTAO43765 313 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms